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1.
Duodecim ; 130(1): 63-70, 2014.
Article in Finnish | MEDLINE | ID: mdl-24547626

ABSTRACT

More than 10,000 percutaneous coronary angioplasties are performed in Finland annually. We examined in a three-year follow-up the results of percutaneous coronary angioplasty performed for 875 patients at the Kuopio University Hospital. Procedural and end-point data were collected from patient records and by mail inquiry. Out of three balloon angioplasties, two were performed for patients having an acute coronary syndrome. One bioactive or drug-eluting stent was inserted for two thirds of the patients. Procedural complications and mortality over three years among patients treated with balloon angioplasty were of good international standard, and balloon angioplasty improved the patients' condition.


Subject(s)
Acute Coronary Syndrome/therapy , Angioplasty, Balloon, Coronary , Acute Coronary Syndrome/mortality , Endpoint Determination , Female , Finland/epidemiology , Follow-Up Studies , Humans , Male , Stents , Treatment Outcome
2.
Biomol NMR Assign ; 3(1): 53-6, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19636946

ABSTRACT

Filamins are large actin-binding and cross-linking proteins which act as linkers between the cytoskeleton and various signaling proteins. Filamin A (FLNa) is the most abundant of the three filamin isoforms found in humans. FLNa contains an N-terminal actin-binding domain and 24 immunoglobulin-like (Ig) domains. The Ig domains are responsible for the FLNa dimerization and most of the interactions that FLNa has with numerous other proteins. There are several crystal and solution structures from isolated single Ig domains of filamins in the PDB database, but only few from longer constructs. Here, we present nearly complete chemical shift assignments of FLNa tandem Ig domains 16-17 and 18-19. Chemical shift mapping between FLNa tandem Ig domain 16-17 and isolated domain 17 suggests a novel domain-domain interaction mode.


Subject(s)
Contractile Proteins/chemistry , Immunoglobulin G/chemistry , Magnetic Resonance Spectroscopy/methods , Microfilament Proteins/chemistry , Amino Acid Sequence , Carbon Isotopes/chemistry , Filamins , Humans , Molecular Sequence Data , Nitrogen Isotopes/chemistry , Protons
3.
J Biol Chem ; 284(37): 25450-8, 2009 Sep 11.
Article in English | MEDLINE | ID: mdl-19622754

ABSTRACT

Filamins are actin filament cross-linking proteins composed of an N-terminal actin-binding domain and 24 immunoglobulin-like domains (IgFLNs). Filamins interact with numerous proteins, including the cytoplasmic domains of plasma membrane signaling and cell adhesion receptors. Thereby filamins mechanically and functionally link the cell membrane to the cytoskeleton. Most of the interactions have been mapped to the C-terminal IgFLNs 16-24. Similarly, as with the previously known compact domain pair of IgFLNa20-21, the two-domain fragments IgFLNa16-17 and IgFLNa18-19 were more compact in small angle x-ray scattering analysis than would be expected for two independent domains. Solution state NMR structures revealed that the domain packing in IgFLNa18-19 resembles the structure of IgFLNa20-21. In both domain pairs the integrin-binding site is masked, although the details of the domain-domain interaction are partly distinct. The structure of IgFLNa16-17 revealed a new domain packing mode where the adhesion receptor binding site of domain 17 is not masked. Sequence comparison suggests that similar packing of three tandem filamin domain pairs is present throughout the animal kingdom, and we propose that this packing is involved in the regulation of filamin interactions through a mechanosensor mechanism.


Subject(s)
Actins/chemistry , Contractile Proteins/chemistry , Immunoglobulins/chemistry , Microfilament Proteins/chemistry , Amino Acid Sequence , Cell Adhesion , Cross-Linking Reagents/chemistry , Cytoskeleton/metabolism , Filamins , Humans , Models, Biological , Molecular Conformation , Molecular Sequence Data , Protein Binding , Protein Structure, Tertiary , Recombinant Proteins/chemistry , Scattering, Radiation
4.
J Biomol NMR ; 44(2): 107-12, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19418025

ABSTRACT

Myotilin is a 57 kDa actin-binding and -bundling protein that consists of a unique serine-rich amino-terminus, two Ig-domains and a short carboxy-terminus with a PDZ-binding motif. Myotilin localizes in sarcomeric Z-discs, where it interacts with several sarcomeric proteins. Point mutations in myotilin cause muscle disorders morphologically highlighted by sarcomeric disarray and aggregation. The actin-binding and dimerization propensity of myotilin has been mapped to the Ig-domains. Here we present high-resolution structure of the first Ig-domain of myotilin (MyoIg1) determined with solution state NMR spectroscopy. Nearly complete chemical shift assignments of MyoIg1 were achieved despite several missing backbone 1H-15N-HSQC signals. The structure derived from distance and dihedral angle restraints using torsion angle dynamics was further refined using molecular dynamics. The structure of MyoIg1 exhibits I-type Ig-fold. The absence of several backbone 1H-15N-HSQC signals can be explained by conformational exchange taking place at the hydrophobic core of the protein.


Subject(s)
Cytoskeletal Proteins/chemistry , Immunoglobulins/chemistry , Muscle Proteins/chemistry , Nuclear Magnetic Resonance, Biomolecular , Connectin , Cytoskeletal Proteins/genetics , Escherichia coli/genetics , Humans , Microfilament Proteins/chemistry , Models, Molecular , Muscle Proteins/genetics , Protein Structure, Tertiary , Recombinant Proteins/chemistry
5.
BMC Struct Biol ; 9: 17, 2009 Mar 24.
Article in English | MEDLINE | ID: mdl-19309529

ABSTRACT

BACKGROUND: Staphylococcus aureus is a Gram-positive pathogenic bacterium causing many kinds of infections from mild respiratory tract infections to life-threatening states as sepsis. Recent emergence of S. aureus strains resistant to numerous antibiotics has created a need for new antimicrobial agents and novel drug targets. S. aureus PrsA is a membrane associated extra-cytoplasmic lipoprotein which contains a parvulin-type peptidyl-prolyl cis-trans isomerase domain. PrsA is known to act as an essential folding factor for secreted proteins in Gram-positive bacteria and thus it is a potential target for antimicrobial drugs against S. aureus. RESULTS: We have solved a high-resolution solution structure of the parvulin-type peptidyl-prolyl cis-trans isomerase domain of S. aureus PrsA (PrsA-PPIase). The results of substrate peptide titrations pinpoint the active site and demonstrate the substrate preference of the enzyme. With detailed NMR spectroscopic investigation of the orientation and tautomeric state of the active site histidines we are able to give further insight into the structure of the catalytic site. NMR relaxation analysis gives information on the dynamic behaviour of PrsA-PPIase. CONCLUSION: Detailed structural description of the S. aureus PrsA-PPIase lays the foundation for structure-based design of enzyme inhibitors. The structure resembles hPin1-type parvulins both structurally and regarding substrate preference. Even though a wealth of structural data is available on parvulins, the catalytic mechanism has yet to be resolved. The structure of S. aureus PrsA-PPIase and our findings on the role of the conserved active site histidines help in designing further experiments to solve the detailed catalytic mechanism.


Subject(s)
Catalytic Domain , Peptidylprolyl Isomerase/chemistry , Staphylococcus aureus/enzymology , Enzyme Inhibitors/chemistry , Histidine/chemistry , NIMA-Interacting Peptidylprolyl Isomerase , Nuclear Magnetic Resonance, Biomolecular , Peptidylprolyl Isomerase/biosynthesis , Peptidylprolyl Isomerase/isolation & purification , Protein Folding , Protein Structure, Tertiary
6.
PLoS One ; 4(3): e4928, 2009.
Article in English | MEDLINE | ID: mdl-19293932

ABSTRACT

BACKGROUND: Mutations in filamin A (FLNa), an essential cytoskeletal protein with multiple binding partners, cause developmental anomalies in humans. METHODOLOGY/PRINCIPAL FINDINGS: We determined the structure of the 23rd Ig repeat of FLNa (IgFLNa23) that interacts with FilGAP, a Rac-specific GTPase-activating protein and regulator of cell polarity and movement, and the effect of the three disease-related mutations on this interaction. A combination of NMR structural analysis and in silico modeling revealed the structural interface details between the C and D beta-strands of the IgFLNa23 and the C-terminal 32 residues of FilGAP. Mutagenesis of the predicted key interface residues confirmed the binding constraints between the two proteins. Specific loss-of-function FLNa constructs were generated and used to analyze the importance of the FLNa-FilGAP interaction in vivo. Point mutagenesis revealed that disruption of the FLNa-FilGAP interface perturbs cell spreading. FilGAP does not bind FLNa homologs FLNb or FLNc establishing the importance of this interaction to the human FLNa mutations. Tight complex formation requires dimerization of both partners and the correct alignment of the binding surfaces, which is promoted by a flexible hinge domain between repeats 23 and 24 of FLNa. FLNa mutations associated with human developmental anomalies disrupt the binding interaction and weaken the elasticity of FLNa/F-actin network under high mechanical stress. CONCLUSIONS/SIGNIFICANCE: Mutational analysis informed by structure can generate reagents for probing specific cellular interactions of FLNa. Disease-related FLNa mutations have demonstrable effects on FLNa function.


Subject(s)
Congenital Abnormalities/metabolism , Contractile Proteins/metabolism , GTPase-Activating Proteins/metabolism , Microfilament Proteins/metabolism , Mutation , Amino Acid Sequence , Binding Sites , Congenital Abnormalities/genetics , Contractile Proteins/genetics , Filamins , GTPase-Activating Proteins/chemistry , Humans , Microfilament Proteins/genetics , Molecular Sequence Data , Molecular Structure , Sequence Homology, Amino Acid
7.
J Biomol NMR ; 37(4): 313-20, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17340206

ABSTRACT

Exchange between protein backbone amide hydrogen and water gives relevant information about solvent accessibility and protein secondary structure stability. NMR spectroscopy provides a convenient tool to study these dynamic processes with saturation transfer experiments. Processing of this type of NMR spectra has traditionally required peak integration followed by exponential fitting, which can be tedious with large data sets. We propose here a computer-aided method that applies inverse Laplace transform in the exchange rate measurement. With this approach, the determination of exchange rates can be automated, and reliable results can be acquired rapidly without a need for manual processing.


Subject(s)
Amides/analysis , Nuclear Magnetic Resonance, Biomolecular/methods , Proteins/chemistry , Protons , Models, Chemical
8.
Blood ; 107(5): 1925-32, 2006 Mar 01.
Article in English | MEDLINE | ID: mdl-16293600

ABSTRACT

Filamin A (FLNa), a dimeric actin cross-linking and scaffold protein with numerous intracellular binding partners, anchors the platelet adhesion glycoprotein (GP) Ib-IX-V receptor to actin cytoskeleton. We mapped the GPIbalpha binding site to a single domain of FLNa and resolved the structure of this domain and its interaction complex with the corresponding GPIbalpha cytoplasmic domain. This is the first atomic structure of this class of membrane glycoprotein-cytoskeleton connection. GPIbalpha binds in a groove formed between the C and D beta strands of FLNa domain 17. The interaction is strikingly similar to that between the beta7 integrin tail and a different FLNa domain, potentially defining a conserved motif for FLNa binding. Nevertheless, the structures also reveal specificity of the interfaces, which explains different regulatory mechanisms. To verify the topology of GPIb-FLNa interaction we also purified the native complex from platelets and showed that GPIb interacts with the C-terminus of FLNa, which is in accordance with our biochemical and structural data.


Subject(s)
Contractile Proteins/chemistry , Microfilament Proteins/chemistry , Multiprotein Complexes/chemistry , Platelet Glycoprotein GPIb-IX Complex/chemistry , Contractile Proteins/ultrastructure , Filamins , Humans , Integrin beta Chains/chemistry , Integrin beta Chains/ultrastructure , Microfilament Proteins/ultrastructure , Multiprotein Complexes/ultrastructure , Platelet Glycoprotein GPIb-IX Complex/ultrastructure , Protein Structure, Quaternary , Protein Structure, Tertiary
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