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1.
Sci Adv ; 5(8): eaaw2851, 2019 08.
Article in English | MEDLINE | ID: mdl-31457083

ABSTRACT

Macrocyclic compounds are an attractive modality for drug development, but the limited availability of large, structurally diverse macrocyclic libraries hampers the discovery of leads. Here, we describe the discovery of efficient macrocyclization reactions based on thiol-to-amine ligations using bis-electrophiles, their application to synthesize and screen large libraries of macrocyclic compounds, and the identification of potent small macrocyclic ligands. The thiol-to-amine cyclization reactions showed unexpectedly high yields for a wide substrate range, which obviated product purification and enabled the generation and screening of an 8988 macrocycle library with a comparatively small effort. X-ray structure analysis of an identified thrombin inhibitor (K i = 42 ± 5 nM) revealed a snug fit with the target, validating the strategy of screening large libraries with a high skeletal diversity. The approach provides a route for screening large sub-kilodalton macrocyclic libraries and may be applied to many challenging drug targets.


Subject(s)
Amines/chemistry , Macrocyclic Compounds/chemistry , Small Molecule Libraries , Sulfhydryl Compounds/chemistry , Antithrombins/chemistry , Antithrombins/pharmacology , Cyclization , Drug Discovery , Humans , Ligands , Macrocyclic Compounds/chemical synthesis , Macrocyclic Compounds/pharmacology , Models, Molecular , Molecular Conformation , Molecular Structure , Trypsin Inhibitors/chemistry , Trypsin Inhibitors/pharmacology
2.
Protein Eng ; 14(12): 1043-52, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11809935

ABSTRACT

Phage display has been shown to facilitate greatly the selection of polypeptides with desired properties by establishing a direct link between the polypeptide and the gene that encodes it. However, selection for catalytic activities displayed on phage remains a challenge, since reaction products diffuse away from the enzyme and make it difficult to recover catalytically active phage-enzymes. We have recently described a selection methodology in which the reaction substrate (and eventually the reaction product) is anchored on calmodulin-tagged phage-enzymes by means of a calmodulin binding peptide. Phage displaying a catalytic activity are physically isolated by means of affinity reagents specific for the product of reaction. In this study, we investigated the efficiency of selection for catalysis by phage display, using a ligase (the Escherichia coli biotin ligase BirA) and an endopeptidase (the rat trypsin His57--> Ala mutant) as model enzymes. These enzymes could be displayed on phage as fusion proteins with calmodulin and the minor coat protein pIII. Both the display of functional enzyme and the efficiency of selection for catalysis were significantly improved by using phage vectors, rather than phagemid vectors. In model selection experiments, phage displaying BirA were consistently enriched (between 4-fold and 800-fold) per round of panning, relative to negative controls. Phage displaying the trypsin His57-->Ala mutant, a relatively inefficient endopeptidase which cleaves a specific dipeptide sequence, were enriched (between 15-fold and 2000-fold), relative to negative controls. In order to improve the catalytic properties of the trypsin His57-->Ala mutant, we constructed a combinatorial phage display library of trypsin mutants. Selection of catalytically active phage-enzymes was evidentiated by increasing phage titres at the different rounds of panning relative to negative control selections, but mutants with catalytic properties superior to those of trypsin His57-->Ala mutant could not be isolated. The results obtained provide evidence that catalytic activities can be recovered using phage display technology, but stress the importance of both library design and stringent biopanning conditions for the recovery of novel enzymes.


Subject(s)
Bacterial Proteins/genetics , Carbon-Nitrogen Ligases/genetics , Escherichia coli Proteins , Peptide Library , Repressor Proteins , Transcription Factors , Trypsin/genetics , Amino Acid Sequence , Animals , Bacterial Proteins/analysis , Calmodulin , Carbon-Nitrogen Ligases/analysis , Cloning, Molecular , Escherichia coli/enzymology , Genetic Vectors , Molecular Sequence Data , Mutation , Rats , Trypsin/analysis
3.
Ned Tijdschr Geneeskd ; 138(4): 196-9, 1994 Jan 22.
Article in Dutch | MEDLINE | ID: mdl-8107921

ABSTRACT

Neuroleptic malignant syndrome was diagnosed in a 27-year-old pregnant female with a psychiatric disorder, after treatment with haloperidol. The syndrome did not respond to treatment with dantrolene. Serious vegetative instability weighed against the use of electroconvulsive treatment. After 29 3/7 weeks of amenorrhoea electroconvulsive treatment was started, and the clinical picture gradually improved. Mother and child were discharged in good clinical condition.


Subject(s)
Electroconvulsive Therapy , Haloperidol/adverse effects , Mental Disorders/drug therapy , Neuroleptic Malignant Syndrome/etiology , Pregnancy Complications/drug therapy , Adult , Female , Haloperidol/administration & dosage , Humans , Infant, Newborn , Neuroleptic Malignant Syndrome/therapy , Pregnancy , Pregnancy Complications/psychology
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