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2.
Mol Immunol ; 47(4): 785-91, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19913303

ABSTRACT

To trace the emergence of modern IgA isotypes during vertebrate evolution we have studied the immunoglobulin repertoire of a model monotreme, the platypus. Two highly divergent IgA-like isotypes (IgA1 and IgA2) were identified and their primary structures were determined from full-length cDNAs. A comparative analysis of the amino acid sequences for IgA from various animal species showed that the two platypus IgA isotypes form a branch clearly separated from their eutherian (placental) counterparts. However, they still conform to the general structure of eutherian IgA, with a hinge region and three constant domains. This indicates that the deletion of the second domain and the formation of a hinge region in IgA did occur very early during mammalian evolution, more than 166 million years ago. The two IgA isotypes in platypus differ in primary structure and appear to have arisen from a very early gene duplication, possibly preceding the metatherian eutherian split. Interestingly, one of these isotypes, IgA1, appears to be expressed in only the platypus, but is present in the echidna based on Southern blot analysis. The platypus may require a more effective mucosal immunity, with two highly divergent IgA forms, than the terrestrial echidna, due to its lifestyle, where it is exposed to pathogens both on land and in the water.


Subject(s)
Genetic Variation , Immunoglobulin A/chemistry , Immunoglobulin A/genetics , Platypus/genetics , Platypus/immunology , Amino Acid Sequence , Animals , Blotting, Northern , Blotting, Southern , Cloning, Molecular , Evolution, Molecular , Gene Expression Regulation , Immunoglobulin A/metabolism , Immunoglobulin E/genetics , Immunoglobulin E/metabolism , Immunoglobulin G/genetics , Immunoglobulin G/metabolism , Immunoglobulin Heavy Chains/genetics , Immunoglobulin Heavy Chains/metabolism , Immunoglobulin Light Chains/genetics , Immunoglobulin Light Chains/metabolism , Immunoglobulin M/genetics , Immunoglobulin M/metabolism , Models, Genetic , Molecular Sequence Data , Phylogeny , Sequence Analysis, DNA , Spleen/immunology , Tachyglossidae/immunology
3.
Allergy ; 61(9): 1063-70, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16918508

ABSTRACT

BACKGROUND: Basophils are inflammatory cells associated with allergy and parasite infections. Investigation of their true biological function has long been hampered by the difficulty in obtaining sufficient amounts of pure basophils and by the lack of phenotypic markers. Moreover, it has been very difficult to clone and identify basophil-specific granule proteins, partially because of an almost complete lack of mRNA in mature circulating basophils. METHODS: To obtain transcriptionally active immature basophils, umbilical cord blood cells were cultured in the presence of interleukin (IL)-3. The cells were analysed by flow cytometry and by histological staining. RESULTS: The continuous presence of IL-3 in cord blood cultures resulted in the expansion of basophil precursors co-expressing FcepsilonRI and the recently described mast cell/basophil marker, 97A6 (CD203c). Several nonbasophil markers (i.e. CD3, CD14, CD15, CD16, CD19 and CD21) were absent on the cultured basophils. However, we show that in early cultures, almost 60% of the CD203c+ cells co-express human leukocyte antigen (HLA)-DR, a marker that is absent on mature circulating basophils. The presence of HLA-DR on basophil precursors may explain the low recovery (24+/-5.2%) obtained after isolation of cultured basophils, when using a conventional basophil isolation kit that removes HLA-DR+ cells. A novel purification method was developed, including a two-step cocktail of antibodies against selected markers, which resulted in both high purity (95+/-0.5%) and recovery (59+/-1.5%) of cultured basophils. CONCLUSIONS: We here establish cord blood cultures as a source from which transcriptionally active basophil precursors can be isolated in reasonable quantities for thorough biochemical characterization.


Subject(s)
Basophils/immunology , Basophils/metabolism , Fetal Blood/cytology , Fetal Blood/immunology , HLA-DR Antigens/genetics , Phosphoric Diester Hydrolases/genetics , Pyrophosphatases/genetics , Receptors, IgE/biosynthesis , Receptors, IgE/genetics , Cell Separation , Cells, Cultured , Fetal Blood/metabolism , HLA-DR Antigens/biosynthesis , Humans , Phosphoric Diester Hydrolases/biosynthesis , Pyrophosphatases/biosynthesis , Stem Cells/immunology , Stem Cells/metabolism , Transcriptional Activation/immunology , Umbilical Veins
4.
FEBS Lett ; 502(1-2): 53-6, 2001 Jul 27.
Article in English | MEDLINE | ID: mdl-11478947

ABSTRACT

Histidine decarboxylase (HDC) synthesizes histamine from histidine in mammals. To evaluate the role of histamine, we generated HDC-deficient mice using a gene targeting method. The mice showed a histamine deficiency and lacked histamine-synthesizing activity from histidine. These HDC-deficient mice are viable and fertile but exhibit a decrease in the numbers of mast cells while the remaining mast cells show an altered morphology and reduced granular content. The amounts of mast cell granular proteases were tremendously reduced. The HDC-deficient mice provide a unique and promising model for studying the role of histamine in a broad range of normal and disease processes.


Subject(s)
Histidine Decarboxylase/physiology , Mast Cells/cytology , Alleles , Animals , Histamine/biosynthesis , Histamine/metabolism , Histidine Decarboxylase/genetics , Mice , Mice, Knockout
5.
DNA Cell Biol ; 20(5): 275-86, 2001 May.
Article in English | MEDLINE | ID: mdl-11410164

ABSTRACT

cDNA clones encoding two novel human KRAB zinc finger proteins, HKr18 and HKr19, were isolated from a human testis cDNA library. Their corresponding genes were later identified in sequences originating from chromosomes 19 and 7, respectively. On the basis of the collected information from gene and cDNA sequences, Hkr18 was found to be a protein of 94 kDa with 20 zinc finger motifs in its C terminus. The HKr19 is a smaller protein, with a molecular weight of 56 kDa containing 11 zinc finger motifs. Both HKr18 and HKr19 contained a KRAB A as well as a KRAB B domain in their N termini. Northern blot analysis showed expression of HKr18 in all human tissues tested, indicating a ubiquitous expression pattern. In contrast, HKr19 showed a more restricted tissue distribution, with detectable expression primarily in testis and fetal tissues. The HKr19 protein is a member of the large ZNF91 subfamily of KRAB zinc finger genes. A PCR-based analysis of the expression of HKr19 and other closely related genes showed that lymphoid, myeloid, and nonhematopoietic cells expressed different sets of these genes. This latter finding indicates that some members of the ZNF91 family may be involved in regulating lineage commitment during hematopoietic development. Transfection of various parts of HKr19 into human embryonic kidney cells (HEK 293 cells) showed that the entire protein and its zinc finger region were toxic to these cells when expressed at high levels. In contrast, the KRAB domain and the linker region seemed to be well tolerated.


Subject(s)
DNA-Binding Proteins/genetics , Nuclear Proteins/genetics , Repressor Proteins , Testis/chemistry , Adult , Amino Acid Sequence , Base Sequence , Blotting, Northern , Cell Line , Cloning, Molecular , Culture Media, Serum-Free , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/metabolism , Fetus/physiology , Gene Library , Humans , Male , Molecular Sequence Data , Nuclear Proteins/chemistry , Nuclear Proteins/metabolism , Phylogeny , Protein Structure, Tertiary , Testis/physiology , Transfection
6.
Immunogenetics ; 53(3): 225-32, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11398967

ABSTRACT

Serine proteases are important granule constituents in several of the major hematopoietic cell lineages. We present here the nucleotide sequence of the gene encoding mouse mast cell protease 8 (mMCP-8). mMCP-8 was initially isolated as a cDNA from a mouse mast cell line, but has recently been found to be expressed primarily by mouse basophils. mMCP-8 and its rat homologues, rMCP-8, -9, and -10, form a new group of mast cell/basophil proteases, which are more closely related to the T-cell granzymes and neutrophil cathepsin G than to the mast cell tryptases and chymases. A dot matrix comparison of the mMCP-8 gene with other closely related hematopoietic serine protease genes shows detectable homology only in the exonic regions of the genes. No indication for conservation in the promoter region or introns was observed. This latter finding indicates that the upstream regulatory region has evolved at a relatively high rate. However, despite the low degree of direct sequence conservation, no major differences in the sizes of introns or exons were observed between mMCP-8 and genes for the closest related hematopoietic serine proteases, the mouse T-cell granzymes and cathepsin G, indicating that after evolutionary separation from the T-cell granzymes and cathepsin G, the majority of mutations primarily involved single base pair substitutions or short insertions or deletions.


Subject(s)
Mast Cells/enzymology , Serine Endopeptidases/genetics , Amino Acid Sequence , Animals , Base Sequence , DNA, Complementary , Mice , Molecular Sequence Data , Sequence Analysis, DNA , Tryptases
7.
Proc Natl Acad Sci U S A ; 98(4): 1422-6, 2001 Feb 13.
Article in English | MEDLINE | ID: mdl-11171966

ABSTRACT

The Krüppel-associated box (KRAB) domain, originally identified as a 75-aa sequence present in numerous Krüppel-type zinc-finger proteins, is a potent DNA-binding-dependent transcriptional repression domain that is believed to function through interaction with the transcriptional intermediary factor 1 (TIF1) beta. On the basis of sequence comparison and phylogenetic analysis, we have recently defined three distinct subfamilies of KRAB domains. In the present study, individual members of each subfamily were tested for transcriptional repression and interaction with TIF1 beta and two other closely related family members (TIF1 alpha and TIF1 gamma). All KRAB variants were shown, (i) to repress transcription when targeted to DNA through fusion to a heterologous DNA-binding domain in mammalian cells, and (ii) to interact specifically with TIF1 beta, but not with TIF1 alpha or TIF1 gamma. Taken together, these results implicate TIF1 beta as a common transcriptional corepressor for the three distinct subfamilies of KRAB zinc-finger proteins and suggest a high degree of conservation in the molecular mechanism underlying their transcriptional repression activity.


Subject(s)
DNA-Binding Proteins/metabolism , Nuclear Proteins/metabolism , Repressor Proteins/metabolism , Transcription Factors/metabolism , Zinc Fingers , Animals , Cell Line , DNA-Binding Proteins/genetics , Gene Expression Regulation , Humans , Kruppel-Like Transcription Factors , Mice , Nuclear Proteins/genetics , Repressor Proteins/genetics , Transcription Factors/genetics , Transcription, Genetic , Tripartite Motif-Containing Protein 28 , U937 Cells
8.
Immunogenetics ; 52(1-2): 19-28, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11132153

ABSTRACT

To study the emergence of the major subfamilies of serine proteases during vertebrate evolution, we present here the primary structure of four serine proteases expressed in the spleen of a monotreme, the platypus, Ornithorhynchus anatinus. Partial cDNA clones for four serine proteases were isolated by a PCR-based strategy. This strategy is based on the high level of sequence identity between various members of the large gene family of trypsin-related serine proteases, over two highly conserved regions, those of the histidine and the serine of the catalytic triad. The partial cDNA clones were used to isolate full-length or almost full-length cDNA clones for three of these proteases from a platypus spleen cDNA library. By phylogenetic analysis, these three clones were identified as being the platypus homologues of human coagulation factor X, neutrophil elastase, and a protease distantly related to the T-cell granzymes. The remaining partial clone was found to represent a close homologue of human complement factor D (adipsin). The isolation of these four clones shows that several of the major subfamilies of serine proteases had evolved as separate subfamilies long before the radiation of the major mammalian lineages of today, the monotremes, the marsupials, and the placental mammals. Upon comparison of the corresponding proteases of monotremes and eutherian mammals, the coagulation and complement proteases were shown to display a higher degree of conservation compared to the hematopoietic proteases N-elastase and the T-cell granzymes. This latter finding indicates a higher evolutionary pressure to maintain specific functions in the complement and coagulation enzymes compared to many of the hematopoietic serine proteases.


Subject(s)
Platypus/genetics , Serine Endopeptidases/genetics , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , DNA, Complementary , Factor X/classification , Factor X/genetics , Humans , Leukocyte Elastase/classification , Leukocyte Elastase/genetics , Mice , Molecular Sequence Data , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Serine Endopeptidases/classification
9.
Eur J Immunol ; 30(12): 3396-402, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11093157

ABSTRACT

To study early events in mast cell / basophil development, the phenotype of a panel of murine cell lines at various stages of differentiation was determined. Based on the expression on various mast cell-specific proteases and several additional hematopoietic differentiation markers, the cell lines CFTL-15 and MCP5 / L were clearly identified as mast cells, although with a relatively immature phenotype. These two cell lines express the high-affinity IgE receptor alpha-chain, the mouse mast cell protease (MMCP)-5 and the carboxypeptidase A (CPA). Bone marrow-derived mast cells and the transplantable mast cell tumor MTC were shown to express the IgE receptor alpha-chain, MMCP-5 and CPA, as well as the mast cell tryptase MMCP-6 and the chymase MMCP-4, a protease expressed only during late stages of mast cell differentiation. These two cell types thus display a more mature mast cell phenotype. In contrast, the cell lines P815 and 32D cl3 did not express any mast cell differentiation markers. Interestingly, the IC-2 cell line was shown to express several markers for immature mast cells and in addition MMCP-8, a serine protease which may represent a marker for mouse basophils. By antibody staining, almost all IC-2 cells were shown to express MMCP-8. This indicates that individual cells may simultaneously express both mast cell and basophil markers. Moreover, these findings suggest that an early branch point in hematopoietic development where mast cells and basophils have a common precursor cell may exist.


Subject(s)
Basophils/physiology , Mast Cells/physiology , Animals , Blotting, Northern , Carboxypeptidases/analysis , Carboxypeptidases A , Cell Differentiation , Cell Line , Immunohistochemistry , Mice , Mice, Inbred C57BL , Serine Endopeptidases/analysis , Tryptases
10.
Biochemistry ; 39(42): 13068-77, 2000 Oct 24.
Article in English | MEDLINE | ID: mdl-11041873

ABSTRACT

Tryptase, a serine protease with trypsin-like substrate cleavage properties, is one of the key effector molecules during allergic inflammation. It is stored in large quantities in the mast cell secretory granules in complex with heparin proteoglycan, and these complexes are released during mast cell degranulation. In the present paper, we have studied the mechanism for tryptase activation. Recombinant mouse tryptase, mouse mast cell protease 6 (mMCP-6), was produced in a mammalian expression system. The mMCP-6 fusion protein contained an N-terminal 6 x His tag followed by an enterokinase (EK) site replacing the native activation peptide (6xHis-EK-mMCP-6). In the absence of heparin, barely detectable enzyme activity was obtained after enterokinase cleavage of 6xHis-EK-mMCP-6 over a pH range of 5.5-7.5. However, when heparin was present, 6xHis-EK-mMCP-6 yielded active enzyme when enterokinase cleavage was performed at pH 5.5-6.0 but not at neutral pH. Affinity chromatography analysis showed that mMCP-6 bound strongly to heparin-Sepharose at pH 6.0 but not at neutral pH. After enterokinase cleavage of the sample at pH 6.0, mMCP-6 occurred in inactive monomeric form as shown by FPLC analysis on a Superdex 200 column. When heparin was added at pH 6.0, enzymatically active higher molecular weight complexes were formed, e.g., a dominant approximately 200 kDa complex that may correspond to tryptase tetramers. No formation of active tetramers was observed at neutral pH. When injected intraperitoneally, mMCP-6 together with heparin caused neutrophil influx, but no signs of inflammation were seen in the absence of heparin. The present paper thus indicates a crucial role for heparin in the formation of active mast cell tryptase.


Subject(s)
Heparin/physiology , Mast Cells/enzymology , Serine Endopeptidases/metabolism , Acids , Animals , Cell Degranulation , Chymases , Enteropeptidase/metabolism , Enzyme Activation , Enzyme Stability , Humans , Hydrogen-Ion Concentration , Hydrolysis , Inflammation Mediators/administration & dosage , Injections, Intraperitoneal , Mast Cells/metabolism , Mice , Mice, Inbred BALB C , Protein Binding , Recombinant Fusion Proteins/administration & dosage , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/metabolism , Serine Endopeptidases/administration & dosage , Serine Endopeptidases/biosynthesis , Serine Endopeptidases/genetics , Time Factors , Tryptases
11.
Eur J Immunol ; 30(9): 2660-8, 2000 Sep.
Article in English | MEDLINE | ID: mdl-11009100

ABSTRACT

In mice infected with the non-lethal malaria parasite Plasmodium chabaudi chabaudi AS, a prominent switch from a Th1 to a Th2 type of response occurs in CD4+ T cells at the time of peak parasitemia or shortly thereafter (9-15 days after infection). This is accompanied by a major increase in IL-4, and a similar decrease in IFN-gamma-producing cells. Non-B-non-T cells have been shown to be the main source of the IL-4 in these mice. The IL-4-producing cells are hyperresponsive to IL-3, indicating mast cell or basophil origin. To further characterize this cell population we have studied various organs at different time points of malarial infection by Northern blot analysis. No significant increase in the expression of any of the classical mouse mast cell serine proteases (MMCP)-1 to 7 or carboxypeptidase A was detected in the spleen during the entire infection. However, a marked increase in the expression of MMCP-8 was observed in the spleen at around day 15 post infection. Isolation of IgE receptor-positive cells from spleen shortly after peak parasitemia led to a prominent enrichment of MMCP-8-expressing cells. Fifty thousand of these cells were, after IL-3 stimulation, found to produce IL-4 to levels comparable with more than one million fully activated T cells. Our results show that basophil-like cells are very potent producers of IL-4 and that IL-4 produced by these cells may be of major importance for the initiation of a Th2 response. In addition, the detection of MMCP-8 in these cells has led to the identification of the first basophil-specific differentiation marker in the mouse.


Subject(s)
Basophils/chemistry , Interleukin-4/biosynthesis , Malaria/immunology , Plasmodium chabaudi , Serine Endopeptidases/analysis , Spleen/immunology , Animals , Blotting, Northern , Blotting, Western , Female , Interleukin-3/pharmacology , Mice , Mice, Inbred BALB C , Receptors, Antigen, T-Cell, alpha-beta/analysis , Receptors, IgE/analysis , Reverse Transcriptase Polymerase Chain Reaction , Spleen/cytology , Tryptases
12.
Kidney Int ; 57(5): 2004-10, 2000 May.
Article in English | MEDLINE | ID: mdl-10792619

ABSTRACT

BACKGROUND: Sequestering of free iron by lactoferrin (LF) is important in the defense against bacteria. In a screening for LF expression in various organs, high levels of LF mRNA were detected in human kidney. This indicated that LF is produced by the kidney and that it may participate in innate immunity of this organ. METHODS AND RESULTS: Antibody staining and in situ hybridization of paraffin-embedded kidney sections showed that LF is expressed in cells lining the distal collecting ducts of the medulla. High levels of both protein and mRNA were detected in these cells. However, a clear difference in the distribution of mRNA and protein within the tissue was observed. LF mRNA was detected along a relatively large portion of the tubuli, whereas LF antigen was found mainly in the very distal regions of the same tubuli. This indicates that LF is released by large regions of the tubuli and possibly reabsorbed in the most distal parts. Using enzyme-linked immunosorbent assay, only very low LF levels were detected in urine. CONCLUSION: The present study shows that LF is produced by the kidney and that both LF mRNA and protein are distributed in a highly ordered fashion. This latter finding, together with the very low levels of LF detected in urine, indicates that LF may contribute to the immune defense in the kidney by reduction of available free iron in the urine. Other possibilities are that LF may play a role in the iron metabolism by recovering free iron from urine and making it available for metabolic use, and that LF may participate in the antioxidant defense systems protecting the kidney against nonmicrobial oxidative injury, that is, ischemia, reperfusion and inflammation.


Subject(s)
Immunity , Iron/metabolism , Kidney/metabolism , Lactoferrin/biosynthesis , Blotting, Northern , Enzyme-Linked Immunosorbent Assay , Humans , Immunohistochemistry , In Situ Hybridization , Kidney/chemistry , Kidney/immunology , Lactoferrin/analysis , Lactoferrin/genetics , RNA, Messenger/analysis
13.
Dev Comp Immunol ; 23(7-8): 597-606, 1999.
Article in English | MEDLINE | ID: mdl-10579388

ABSTRACT

To address the question of the Ig isotype repertoire of non placental mammals, we have examined the Ig expression in the marsupial Monodelphis domestica (grey short tailed opossum). Screening of an opossum spleen cDNA library has previously led to the isolation of full length clones for opossum IgG (gamma chain), IgE (epsilon chain) and IgA (alpha chain). We now present the isolation of several cDNA clones encoding the entire constant regions of the opossum IgM (mu chain). A comparative analysis of the amino acid sequences for IgM from various animal species showed that opossum IgM, within the various animals studied, is the most divergent member of its Ig class. However, it still conforms to the general structure of IgM in other vertebrates. Four Ig classes have now been identified in opossum and only one isotype is apparently present within each Ig class, IgM, IgG, IgA and IgE. Opossum has previously been shown to have a limited VH region diversity, with only two V gene families. Both of these belong to the group III of mammalian VH sequences. This limitation in variability is to some extent compensated for by a large variation in D, P and N regions, both in size and in sequence. However, evidence for the expression of only two functional J segments has so far been detected, which indicates a rather limited diversity also of the J segments in the opossum.


Subject(s)
Immunoglobulin M/genetics , Immunoglobulin Variable Region/genetics , Immunoglobulin mu-Chains/genetics , Opossums/immunology , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , DNA, Complementary , Humans , Immunoglobulin M/classification , Immunoglobulin Variable Region/classification , Immunoglobulin mu-Chains/classification , Molecular Sequence Data , Opossums/genetics , Sequence Analysis, DNA , Sequence Homology, Amino Acid
14.
Nature ; 400(6746): 773-6, 1999 Aug 19.
Article in English | MEDLINE | ID: mdl-10466727

ABSTRACT

Heparin is a sulphated polysaccharide, synthesized exclusively by connective-tissue-type mast cells and stored in the secretory granules in complex with histamine and various mast-cell proteases. Although heparin has long been used as an antithrombotic drug, endogenous heparin is not present in the blood, so it cannot have a physiological role in regulating blood coagulation. The biosynthesis of heparin involves a series of enzymatic reactions, including sulphation at various positions. The initial modification step, catalysed by the enzyme glucosaminyl N-deacetylase/N-sulphotransferase-2, NDST-2, is essential for the subsequent reactions. Here we report that mice carrying a targeted disruption of the gene encoding NDST-2 are unable to synthesize sulphated heparin. These NDST-2-deficient mice are viable and fertile but have fewer connective-tissue-type mast cells; these cells have an altered morphology and contain severely reduced amounts of histamine and mast-cell proteases. Our results indicate that one site of physiological action for heparin could be inside connective-tissue-type mast cells, where its absence results in severe defects in the secretory granules.


Subject(s)
Amidohydrolases/metabolism , Heparin/biosynthesis , Mast Cells/enzymology , Sulfotransferases/metabolism , Amidohydrolases/deficiency , Amidohydrolases/genetics , Animals , Cell Count , Cell Differentiation , Chymases , Crosses, Genetic , Female , Gene Targeting , Genotype , Heparin/metabolism , Immunoglobulin E/immunology , Male , Mast Cells/ultrastructure , Mice , Mice, Inbred C57BL , Mutagenesis , Neutrophils/immunology , Peritoneum/pathology , Serine Endopeptidases/metabolism , Stem Cells , Sulfates/metabolism , Sulfotransferases/deficiency , Sulfotransferases/genetics
15.
DNA Cell Biol ; 18(5): 381-96, 1999 May.
Article in English | MEDLINE | ID: mdl-10360839

ABSTRACT

Although the KRAB zinc finger proteins probably constitute the single largest class of transcription factors within the human genome, almost nothing is known about their biological function. To increase our knowledge about this interesting and relatively unexplored family of potent transcriptional repressors, we here present the cloning, structural analysis, and expression study of three novel mouse KRAB zinc finger proteins. In addition, we present an extensive comparative analysis of various members of this gene family based on the structure of the common KRAB A motif. At least three larger subfamilies of KRAB zinc finger proteins are identified: one carrying the classical KRAB A motif only, another holding both a classical KRAB A and a classical KRAB B motif, and a third holding a classical KRAB A and a highly divergent KRAB B domain, named b. A large variation both in size and in primary amino acid sequence was observed in the linker region between the KRAB domain and the C-terminally located zinc finger repeats. This variability indicates that this region is of minor importance for the biological function of KRAB-containing zinc finger proteins. The fact that in many zinc finger genes, the entire or almost the entire linker region is composed of degenerate finger motifs substantiates this conclusion. The absence of identifiable KRAB A and B motifs in the genome of yeast, Saccharomyces cerevisiae, indicates a relatively late appearance of the KRAB domain in evolution and may suggest that the biological functions are restricted to multicellular organisms. In addition, we show that the expression of individual members of one subfamily of KRAB zinc finger genes is restricted to specific hematopoietic cell lineages. This finding suggests that KRAB zinc finger proteins may play a role in lineage commitment, possibly silencing leakage transcription from nonlineage-expressed genes.


Subject(s)
Evolution, Molecular , Zinc Fingers/genetics , Amino Acid Sequence , Animals , Base Sequence , Blotting, Northern , Cloning, Molecular , DNA, Complementary/analysis , DNA-Binding Proteins/biosynthesis , Humans , Kruppel-Like Transcription Factors , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mice, Inbred CBA , Molecular Sequence Data , Multigene Family , Phylogeny , Sequence Analysis , Sequence Homology, Amino Acid
16.
Eur J Biochem ; 261(1): 244-50, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10103056

ABSTRACT

We present the cloning and structural analysis of a novel member of the large family of trypsin-related serine proteases. Northern blot analysis shows that this protease, in adult tissues, is expressed almost exclusively in the human testis. In addition, a larger transcript was detected in relatively high abundance in several embryonic tissues, indicating different functions during embryonic and adult life. Sera raised against this protease was used to locate the expression in adult tissues to the testosterone producing cells of the testis, the interstitial Leydig cells. We therefore propose the name leydin for this novel protease. Leydin is clearly distinct from acrosin, the other testis-specific serine protease which is expressed by the spermatocytes. Leydin is probably a two-chain protease such as acrosin, prostasin, and coagulation factor XI. The heavy chain consists of 246 amino acids, corresponding to a molecular mass of 27384 Da and a net charge of +10.76. The size of the light chain is between 9 and 18 amino acids depending on the site of proteolytic cleavage, which remains to be determined. The amino-acid residues surrounding the active site indicate a trypsin-like cleavage specificity. The presence of two dibasic sequences Arg-Arg and Lys-Arg at the N-terminus of the heavy chain indicate that one or more subtilisin-like endopeptidases are responsible for the processing of leydin. However, leydin may also be activated by a trypsin-like enzyme, possibly by auto catalysis.


Subject(s)
Leydig Cells/enzymology , Serine Endopeptidases/chemistry , Serine Endopeptidases/genetics , Adult , Amino Acid Sequence , Base Sequence , Cloning, Molecular , DNA, Complementary/genetics , Dimerization , Gene Expression , Humans , Immunohistochemistry , Male , Molecular Sequence Data , Molecular Weight , Phylogeny , Protein Conformation , RNA, Messenger/genetics , RNA, Messenger/metabolism , Serine Endopeptidases/metabolism , Tissue Distribution
17.
Eur J Immunol ; 28(11): 3730-7, 1998 11.
Article in English | MEDLINE | ID: mdl-9842915

ABSTRACT

To study the kinetics and the phenotype of the mast cells (MC) arising during infection with the nematode Nippostrongylus brasiliensis, monospecific cDNA probes for nine different MC proteases were used in a Northern blot analysis of RNA from the small intestine of infected rats. The expression was analyzed at four individual time points during infection, day 0 (before infection), and days 7, 12 and 16 post infection. A dramatic increase in mRNA for rat mast cell protease (RMCP)-2, the major mucosal MC protease in the rat, was observed, beginning around day 7 after infection and peaking around day 12. At day 16 the expression was already beginning to decline. An almost identical pattern of mRNA expression was detected for the RMCP-8 subfamily of rat MC proteases (RMCP-8, -9 and -10) and for two additional rat serine proteases, the chymases RMCP-3 and -4. No simultaneous increase in the proteases known to be expressed preferentially by mature connective tissue MC (RMCP-1, -6 and -7) was observed. This is consistent with our finding that the expansion of MC in the intestines of parasite-infected animals was limited, almost exclusively, to the mucosal MC population. However, a minor increase in RMCP-5 and MC carboxypeptidase A (CPA) mRNA was detected at day 12 after infection, suggesting a derivation of mucosal MC from an expanding RMCP-5- and CPA-positive population of MC precursors.


Subject(s)
Intestinal Mucosa/metabolism , Nippostrongylus , RNA, Messenger/analysis , Serine Endopeptidases/genetics , Strongylida Infections/metabolism , Animals , Carboxypeptidases/genetics , Carboxypeptidases A , Chymases , Kinetics , Male , Polymerase Chain Reaction , Rats , Rats, Sprague-Dawley , Tryptases
18.
Eur J Immunol ; 28(9): 2738-50, 1998 Sep.
Article in English | MEDLINE | ID: mdl-9754561

ABSTRACT

In birds, reptiles and amphibians the IgY isotype exhibits the functional characteristics of both of IgG and IgE. Hence, the gene for IgY most likely duplicated some time during early mammalian evolution and formed the ancestor of present day IgG and IgE. To address the question of when IgY duplicated and formed two functionally distinct isotypes, and to study when IgG and IgA lost their second constant domains, we have examined the Ig expression in a non-placental mammal, the marsupial Monodelphis domestica (grey short-tailed opossum). Screening of an opossum spleen cDNA library revealed the presence of all three isotypes in marsupials. cDNA clones encoding the entire constant regions of opossum IgE (epsilon chain), IgG (gamma chain) and IgA (alpha chain) were isolated, and their nucleotide sequences were determined. A comparative analysis of the amino acid sequences for IgY, IgA, IgE and IgG from various animal species showed that opossum IgE, IgG and IgA on the phylogenetic tree form branches clearly separated from their eutherian counterparts. However, they still conform to the general structure found in eutherian IgE, IgG and IgA. Our findings indicate that all the major evolutionary changes in the Ig isotype repertoire, and in basic Ig structure that have occurred since the evolutionary separation of mammals from the early reptile lineages, occurred prior to the evolutionary separation of marsupials and placental mammals.


Subject(s)
Evolution, Molecular , Genes, Immunoglobulin , Immunoglobulin A/genetics , Immunoglobulin E/genetics , Immunoglobulin G/genetics , Immunoglobulin Switch Region/genetics , Opossums , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , DNA, Complementary/analysis , DNA, Complementary/genetics , Immunoglobulin A/immunology , Immunoglobulin E/immunology , Immunoglobulin G/immunology , Molecular Sequence Data , Polymerase Chain Reaction , Sequence Alignment
19.
Eur J Immunol ; 28(3): 1022-33, 1998 Mar.
Article in English | MEDLINE | ID: mdl-9541598

ABSTRACT

Using a recently developed PCR-based strategy, a cDNA encoding a novel mouse mast cell (MC) serine protease (MMCP-8) was isolated and characterized. The MMCP-8 mRNA contains an open reading frame of 247 amino acids (aa), divided into a signal sequence of 18 aa followed by a 2-aa activation peptide (Gly-Glu) and a mature protease of 227 aa. The mature protease has an M(r) of 25072, excluding post-translational modifications, a net positive charge of +12 and six potential N-glycosylation sites. MMCP-8 showed a high degree of homology with mouse granzyme B in the critical regions for determining substrate cleavage specificity, indicating that MMCP-8, similar to granzyme B, preferentially cleaves after Asp residues. A comparative analysis of the aa sequence of MMCP-8 with other hematopoietic serine proteases shows that it is more closely related to cathepsin G and T cell granzymes than to the MC chymases. We therefore conclude that MMCP-8 belongs to a novel subfamily of mouse MC proteases distinct from both the classical chymases and tryptases. Southern blot analysis of BALB/c genomic DNA indicated that only one MMCP-8 gene (or MMCP-8 like gene) is present in the mouse genome. Northern blot analysis of rodent hematopoietic cell lines revealed high levels of MMCP-8 mRNA in a mouse connective tissue MC-like tumor line. However, MMCP-8 mRNA could not be detected in mouse liver, intestine, lung or ears, indicating very low expression in normal tissues. Analysis of the expression of different MMCP in the tissues of Schistosoma mansoni-infected BALB/c mice showed a strong increase in MMCP-8 levels in the lungs but not in the intestines of infected animals, suggesting the presence of a novel subpopulation of MC in the lungs that expressed MMCP-8, either alone or in combination with MMCP-5 and carboxypeptidase A. The dramatic increase in MMCP-1 and MMCP-2 levels but not of MMCP-8 in the intestines of parasitized animals also shows that MMCP-8 is not expressed in mucosal MC in the mouse. This latter is in clear contrast to what has been observed in the rat where the MMCP-8 homologues, RMCP-8, -9 and -10, can be considered as true mucosal MC proteases.


Subject(s)
Mast Cells/enzymology , Serine Endopeptidases/genetics , Amino Acid Sequence , Animals , Base Sequence , Cell Differentiation , Chymases , Gene Expression , Genes , Mice , Molecular Sequence Data , Phylogeny , Rats , Schistosomiasis mansoni/enzymology , Sequence Alignment , Tissue Distribution , Tryptases
20.
J Biol Chem ; 273(8): 4747-53, 1998 Feb 20.
Article in English | MEDLINE | ID: mdl-9468538

ABSTRACT

Myeloperoxidase (MPO), stored in azurophil granules of neutrophils, is critical for an optimal oxygen-dependent microbicidal activity of these cells. Pro-MPO goes through a stepwise proteolytic trimming with elimination of an amino-terminal propeptide to yield one heavy and one light polypeptide chain. The propeptide of MPO may have a role in retention and folding of the nascent protein into its tertiary structure or in targeting of pro-MPO for processing and storage in granules. A propeptide-deleted pro-MPO mutant (MPODeltapro) was constructed to determine if deletion of the propeptide interferes with processing and targeting after transfection to the myeloid 32D cell line. Transfection of full-length cDNA for human MPO results in normal processing and targeting of MPO to cytoplasmic dense organelles. Although the efficiency of incorporation was lower for MPODeltapro, both pro-MPO and MPODeltapro showed heme incorporation indicating that the propeptide is not critical for this process. Deletion of the propeptide results in synthesis of a protein that lacks processing into mature two-chain forms but rather is degraded intracellularly or secreted. The finding of continued degradation of MPODeltapro in the presence of lysosomotrophic agents or brefeldin A rules out that the observed degradation takes place after transfer to granules. Intracellular pro-MPO has high mannose oligosaccharide side chains, whereas stored mature MPO was found to have both high mannose and complex oligosaccharide side chains as judged by only partial sensitivity to endoglycosidase H. The propeptide may normally interfere with the generation of certain complex oligosaccharide chain(s) supported by the finding of high mannose side chains in secreted pro-MPO and lack of them in MPODeltapro that contained complex oligosaccharide side chains only. In conclusion, elimination of the propeptide of pro-MPO blocks the maturation process and abolishes accumulation of the final product in granules suggesting a critical role of the propeptide for late processing of pro-MPO and targeting for storage in granules.


Subject(s)
Enzyme Precursors/metabolism , Peroxidase/metabolism , Protein Processing, Post-Translational , Animals , Cell Line , DNA, Complementary , Enzyme Precursors/genetics , Hexosaminidases/metabolism , Humans , Mice , Mutagenesis, Site-Directed , Oligosaccharides/metabolism , Peroxidase/genetics , Sequence Deletion , Transfection
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