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1.
Front Big Data ; 4: 759110, 2021.
Article in English | MEDLINE | ID: mdl-34901843

ABSTRACT

Scene understanding is a key technical challenge within the autonomous driving domain. It requires a deep semantic understanding of the entities and relations found within complex physical and social environments that is both accurate and complete. In practice, this can be accomplished by representing entities in a scene and their relations as a knowledge graph (KG). This scene knowledge graph may then be utilized for the task of entity prediction, leading to improved scene understanding. In this paper, we will define and formalize this problem as Knowledge-based Entity Prediction (KEP). KEP aims to improve scene understanding by predicting potentially unrecognized entities by leveraging heterogeneous, high-level semantic knowledge of driving scenes. An innovative neuro-symbolic solution for KEP is presented, based on knowledge-infused learning, which 1) introduces a dataset agnostic ontology to describe driving scenes, 2) uses an expressive, holistic representation of scenes with knowledge graphs, and 3) proposes an effective, non-standard mapping of the KEP problem to the problem of link prediction (LP) using knowledge-graph embeddings (KGE). Using real, complex and high-quality data from urban driving scenes, we demonstrate its effectiveness by showing that the missing entities may be predicted with high precision (0.87 Hits@1) while significantly outperforming the non-semantic/rule-based baselines.

2.
IEEE J Biomed Health Inform ; 18(2): 515-24, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24058038

ABSTRACT

Semantic computing technologies have matured to be applicable to many critical domains such as national security, life sciences, and health care. However, the key to their success is the availability of a rich domain knowledge base. The creation and refinement of domain knowledge bases pose difficult challenges. The existing knowledge bases in the health care domain are rich in taxonomic relationships, but they lack nontaxonomic (domain) relationships. In this paper, we describe a semiautomatic technique for enriching existing domain knowledge bases with causal relationships gleaned from Electronic Medical Records (EMR) data. We determine missing causal relationships between domain concepts by validating domain knowledge against EMR data sources and leveraging semantic-based techniques to derive plausible relationships that can rectify knowledge gaps. Our evaluation demonstrates that semantic techniques can be employed to improve the efficiency of knowledge acquisition.


Subject(s)
Electronic Health Records , Information Storage and Retrieval/methods , Semantics , Algorithms , Humans , Knowledge Bases
3.
Carbohydr Res ; 340(18): 2802-7, 2005 Dec 30.
Article in English | MEDLINE | ID: mdl-16242678

ABSTRACT

The amount of glycomics data being generated is rapidly increasing as a result of improvements in analytical and computational methods. Correlation and analysis of this large, distributed data set requires an extensible and flexible representational standard that is also 'understood' by a wide range of software applications. An XML-based data representation standard that faithfully captures essential structural details of a glycan moiety along with additional information (such as data provenance) to aid the interpretation and usage of glycan data, will facilitate the exchange of glycomics data across the scientific community. To meet this need, we introduce GLYcan Data Exchange (GLYDE) standard as an XML-based representation format to enable interoperability and exchange of glycomics data. An online tool () for the conversion of other representations to GLYDE format has been developed.


Subject(s)
Database Management Systems/standards , Information Storage and Retrieval/standards , Polysaccharides/chemistry , Polysaccharides/standards , Software/standards , Carbohydrate Sequence , Computer Simulation , Databases as Topic , Molecular Sequence Data
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