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1.
Dalton Trans ; (7): 1214-20, 2005 Apr 07.
Article in English | MEDLINE | ID: mdl-15782256

ABSTRACT

Density functional methods have been used to calculate the geometries, electronic structure and ionization energies (IE) of N-heterocyclic carbene complexes of palladium and platinum, [M(CN2R2C2H2)2](M = Pd, Pt; R = H, Me, Bu t). Agreement with X-ray structures (R = Bu t) was good. Calculated IE agreed well with the photoelectron (PE) spectra (R = Bu t); metal bands were calculated to be within 0.25 eV of the experimental values, whereas the higher lying ligand bands deviated by up to 0.9 eV. Spin-orbit methods were needed to achieve this level of agreement for the Pt complex, but the calculations were found to underestimate the spin-orbit splitting somewhat. The principal metal-ligand bonding is between the carbene lone pair HOMO and a (d(z2)+ s) hybrid on the metal. The metal p(z) orbital contributes very little to the bonding. The metal d(xz,yz) orbitals mix primarily with the filled pi3 orbitals on the ligands and secondarily with the empty pi5 orbitals. Consequently they are little stabilized in comparison to the metal d(xy,x2- y2) orbitals, which are non-bonding in the complex. The first PE band for both the Pd and Pt complexes is from ionization of a (s - d(z2)) hybrid orbital. The IE is greater for Pt than for Pd on account of the post-lanthanide relativistic stabilization of the Pt 6s orbital.

2.
Genetics ; 169(3): 1291-303, 2005 Mar.
Article in English | MEDLINE | ID: mdl-15654114

ABSTRACT

Double-strand breaks (DSBs) initiate meiotic recombination. The DSB repair model predicts that both genetic markers spanning the DSB should be included in heteroduplex DNA and be detectable as non-Mendelian segregations (NMS). In experiments testing this, a significant fraction of events do not conform to this prediction, as only one of the markers displays NMS (one-sided events). Two explanations have been proposed to account for the discrepancies between the predictions and experimental observations. One suggests that two-sided events are the norm but are "hidden" as heteroduplex repair frequently restores the parental configuration of one of the markers. Another explanation posits that one-sided events reflect events in which heteroduplex is formed predominantly on only one side of the DSB. In the absence of heteroduplex repair, the first model predicts that two-sided events would be revealed at the expense of one-sided events, while the second predicts no effect on the distribution of events when heteroduplex repair is lost. We tested these predictions by deleting the DNA mismatch repair genes MSH2 or MLH1 and analyzing the proportion of two-sided events. Unexpectedly, the results do not match the predictions of either model. In both mlh1Delta and msh2Delta, the proportion of two-sided events is significantly decreased relative to wild type. These observations can be explained in one of two ways. Either Msh2p/Mlh1p-independent mispair removal leads to restoration of one of the markers flanking the DSB site or Msh2p/Mlh1p actively promote two-sided events.


Subject(s)
Alcohol Oxidoreductases/metabolism , Aminohydrolases/metabolism , Base Pair Mismatch , DNA Repair , DNA-Binding Proteins/metabolism , Fungal Proteins/metabolism , Pyrophosphatases/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/genetics , Adaptor Proteins, Signal Transducing , Base Sequence , Chromosome Mapping , Chromosomes, Fungal , DNA Primers , Models, Genetic , Molecular Sequence Data , MutL Protein Homolog 1 , MutS Homolog 2 Protein , Polymerase Chain Reaction
3.
Inorg Chem ; 43(11): 3475-83, 2004 May 31.
Article in English | MEDLINE | ID: mdl-15154811

ABSTRACT

In contrast to [Cp(2)MoH(3)](+), which is a thermally stable trihydride complex, the ansa-bridged analogue [(eta-C(5)H(4))(2)CMe(2)MoH(H(2))](+) (1) is a thermally labile dihydrogen/hydride complex. Partial deuteration of the hydride ligands allows observation of J(H)(-)(D) = 11.9 Hz in 1-d(1) and 9.9 Hz in 1-d(2) (245 K), indicative of a dihydrogen/hydride structure. There is a slight preference for deuterium to concentrate in the dihydrogen ligand. A rapid dynamic process interchanges the hydride and dihydrogen moieties in complex 1. Low temperature (1)H NMR spectra of 1 give a single hydride resonance, which broadens at very low temperature due to rapid dipole-dipole relaxation (T(1) = 23 ms (750 MHz, 175 K) for the hydride resonance in 1). Low temperature (1)H NMR spectra of 1-d(2) allow the observation of decoalescence at 180 K into two resonances. The bound dihydrogen ligand exhibits hindered rotation with DeltaG(150) = 7.4 kcal/mol, but H atom exchange is still rapid at all accessible temperatures (down to 130 K). Density functional calculations confirm the dihydrogen/hydride structure as the ground state for the molecule and give estimates for the energy of two hydrogen exchange processes in good agreement with experiment. The presence of the C ansa bridge is shown to decrease the ability of the metallocene fragment to donate to the hydrogens, thus stabilizing the (eta(2)-H(2)) unit and modulating the barrier to H(2) rotation.

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