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1.
Nucleic Acids Res ; 38(13): 4527-38, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20360045

ABSTRACT

FoxM1 is a member of the Forkhead family of transcription factors and is implicated in inducing cell proliferation and some forms of tumorigenesis. It binds promoter regions with a preference for tandem repeats of a consensus 'TAAACA' recognition sequence. The affinity of the isolated FoxM1 DNA-binding domain for this site is in the micromolar range, lower than observed for other Forkhead proteins. To explain these FoxM1 features, we determined the crystal structure of its DNA-binding domain in complex with a tandem recognition sequence. FoxM1 adopts the winged-helix fold, typical of the Forkhead family. Neither 'wing' of the fold however, makes significant contacts with the DNA, while the second, C-terminal, wing adopts an unusual ordered conformation across the back of the molecule. The lack of standard DNA-'wing' interactions may be a reason for FoxM1's relatively low affinity. The role of the 'wings' is possibly undertaken by other FoxM1 regions outside the DBD, that could interact with the target DNA directly or mediate interactions with other binding partners. Finally, we were unable to show a clear preference for tandem consensus site recognition in DNA-binding, transcription activation or bioinformatics analysis; FoxM1's moniker, 'Trident', is not supported by our data.


Subject(s)
Forkhead Transcription Factors/chemistry , Promoter Regions, Genetic , Base Sequence , Binding Sites , Consensus Sequence , DNA/chemistry , Forkhead Box Protein M1 , Forkhead Transcription Factors/genetics , Forkhead Transcription Factors/metabolism , Genome, Human , Humans , Models, Molecular , Mutation , Protein Binding , Protein Multimerization , Protein Structure, Secondary , Protein Structure, Tertiary , Tandem Repeat Sequences , Transcription, Genetic
2.
Leukemia ; 23(8): 1480-9, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19340006

ABSTRACT

Ubiquitination plays a major role in many aspects of hematopoiesis. Alterations in ubiquitination have been implicated in hematological cancer. The ubiquitin ligase Triad1 controls the proliferation of myeloid cells. Here, we show that two RING (really interesting new gene) domains in Triad1 differentially bind ubiquitin-conjugating enzymes, UbcH7 and Ubc13. UbcH7 and Ubc13 are known to catalyze the formation of different poly-ubiquitin chains. These chains mark proteins for proteasomal degradation or serve crucial non-proteolytic functions, respectively. In line with the dual Ubc interactions, we observed that Triad1 catalyzes the formation of both types of ubiquitin chains. The biological relevance of this finding was studied by testing Triad1 mutants in myeloid clonogenic assays. Full-length Triad1 and three mutants lacking conserved domains inhibited myeloid colony formation by over 50%. Strikingly, deletion of either RING finger completely abrogated the inhibitory effect of Triad1 in clonogenic growth. We conclude that Triad1 exhibits dual ubiquitin ligase activity and that both of its RING domains are crucial to inhibit myeloid cell proliferation. The differential interaction of the RINGs with Ubcs strongly suggests that the ubiquitination mediated through UbcH7 as well as Ubc13 plays a major role in myelopoiesis.


Subject(s)
Myelopoiesis/physiology , Protein Interaction Mapping , RING Finger Domains , Ubiquitin-Conjugating Enzymes/metabolism , Ubiquitin-Protein Ligases/physiology , Animals , Binding Sites , COS Cells , Cell Line , Chlorocebus aethiops , Humans , Kidney , Mice , NIH 3T3 Cells , Protein Binding , Protein Processing, Post-Translational , Recombinant Fusion Proteins/physiology , Structure-Activity Relationship , Two-Hybrid System Techniques , U937 Cells/metabolism , Ubiquitin-Protein Ligases/chemistry , Ubiquitin-Protein Ligases/genetics , Ubiquitination
3.
Control Clin Trials ; 5(4 Suppl): 472-5, 1984 Dec.
Article in English | MEDLINE | ID: mdl-6518774

ABSTRACT

The U.S. Department of Agriculture's regulation of food and food ingredients is essentially limited to meat and poultry products. Within this area, there do not appear to be any overriding general problems associated with the concept of the use of adherence markers that are deemed to be both safe and effective. Although present regulations do not specifically authorize such a practice, they could be amended through utilization of standard rule-making procedures. There also appears to be sufficient basis, under current regulation, for some controlled, experimental evaluation of the concept. The Department's inspection and label approval systems for meat and poultry products may serve to facilitate such an approach, while providing a relatively high level of regulatory control. Practical problems, in areas such as the scope and applicability of inspection coverage and appropriate labeling, can and should be identified and resolved at a relatively early stage of the project, if the introduction of these substances into meat and poultry products is deemed to be a viable option.


Subject(s)
Agriculture , Food Additives/analysis , Food Analysis/standards , Government Agencies , Food Labeling , Legislation, Food , United States
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