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1.
Q Rev Biophys ; 52: e9, 2019 10 22.
Article in English | MEDLINE | ID: mdl-31637984

ABSTRACT

Night-migratory songbirds appear to sense the direction of the Earth's magnetic field via radical pair intermediates formed photochemically in cryptochrome flavoproteins contained in photoreceptor cells in their retinas. It is an open question whether this light-dependent mechanism could be sufficiently sensitive given the low-light levels experienced by nocturnal migrants. The scarcity of available photons results in significant uncertainty in the signal generated by the magnetoreceptors distributed around the retina. Here we use results from Information Theory to obtain a lower bound estimate of the precision with which a bird could orient itself using only geomagnetic cues. Our approach bypasses the current lack of knowledge about magnetic signal transduction and processing in vivo by computing the best-case compass precision under conditions where photons are in short supply. We use this method to assess the performance of three plausible cryptochrome-derived flavin-containing radical pairs as potential magnetoreceptors.


Subject(s)
Behavior, Animal/radiation effects , Darkness , Magnetic Fields , Songbirds/physiology , Animal Migration/radiation effects , Animals , Cryptochromes/metabolism , Songbirds/metabolism
2.
Science ; 364(6441): 653-658, 2019 05 17.
Article in English | MEDLINE | ID: mdl-31097661

ABSTRACT

Unlike mammals, Xenopus laevis tadpoles have a high regenerative potential. To characterize this regenerative response, we performed single-cell RNA sequencing after tail amputation. By comparing naturally occurring regeneration-competent and -incompetent tadpoles, we identified a previously unrecognized cell type, which we term the regeneration-organizing cell (ROC). ROCs are present in the epidermis during normal tail development and specifically relocalize to the amputation plane of regeneration-competent tadpoles, forming the wound epidermis. Genetic ablation or manual removal of ROCs blocks regeneration, whereas transplantation of ROC-containing grafts induces ectopic outgrowths in early embryos. Transcriptional profiling revealed that ROCs secrete ligands associated with key regenerative pathways, signaling to progenitors to reconstitute lost tissue. These findings reveal the cellular mechanism through which ROCs form the wound epidermis and ensure successful regeneration.


Subject(s)
Epidermis/physiology , Re-Epithelialization/physiology , Tail/physiology , Xenopus laevis/physiology , Animals , Epidermal Cells/physiology , Re-Epithelialization/genetics , Sequence Analysis, RNA/methods , Single-Cell Analysis/methods , Transcriptome , Xenopus Proteins/genetics , Xenopus laevis/genetics
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