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1.
Front Microbiol ; 3: 67, 2012.
Article in English | MEDLINE | ID: mdl-22363337

ABSTRACT

Southeast Asia has become the center of rapid industrial development and economic growth. However, this growth has far outpaced investment in public infrastructure, leading to the unregulated release of many pollutants, including wastewater-related contaminants such as antibiotics. Antibiotics are of major concern because they can easily be released into the environment from numerous sources, and can subsequently induce development of antibiotic-resistant bacteria. Recent studies have shown that for some categories of drugs this source-to-environment antibiotic resistance relationship is more complex. This review summarizes current understanding regarding the presence of quinolones, sulfonamides, and tetracyclines in aquatic environments of Indochina and the prevalence of bacteria resistant to them. Several noteworthy findings are discussed: (1) quinolone contamination and the occurrence of quinolone resistance are not correlated; (2) occurrence of the sul sulfonamide resistance gene varies geographically; and (3) microbial diversity might be related to the rate of oxytetracycline resistance.

2.
Sci Total Environ ; 409(15): 2894-901, 2011 Jul 01.
Article in English | MEDLINE | ID: mdl-21669325

ABSTRACT

The ubiquitous application and release of antibiotics to the environment can result in bacterial antibiotic resistance, which in turn can be a serious risk to humans and other animals. Southeast Asian countries commonly apply an integrated recycling farm system called VAC (Vegetable, Aquaculture and Caged animal). In the VAC environment, antibiotics are released from animal and human origins, which would cause antibiotic-resistant bacteria (ARB). This study evaluated occurrence of ARB in the VAC environment in northern Vietnam, with quantitative analysis of antibiotic pollution. We found that sulfonamides were commonly detected at all sites. In dry season, while sulfamethazine was a major contaminant in pig farm pond (475-6662 ng/l) and less common in city canal and aquaculture sites, sulfamethoxazole was a major one in city canal (612-4330 ng/l). Erythromycin (154-2246 ng/l) and clarithromycin (2.8-778 ng/ml) were the common macrolides in city canal, but very low concentrations in pig farm pond and aquaculture sites. High frequencies of sulfamethoxazole-resistant bacteria (2.14-94.44%) were found whereas the occurrence rates of erythromycin-resistant bacteria were lower (<0.01-38.8%). A positive correlation was found between sulfamethoxazole concentration and occurrence of sulfamethoxazole-resistant bacteria in dry season. The sulfamethoxazole-resistant isolates were found to belong to 25 genera. Acinetobacter and Aeromonas were the major genera. Twenty three of 25 genera contained sul genes. This study showed specific contamination patterns in city and VAC environments and concluded that ARB occurred not only within contaminated sites but also those less contaminated. Various species can obtain resistance in VAC environment, which would be reservoir of drug resistance genes. Occurrence of ARB is suggested to relate with rainfall condition and horizontal gene transfer in diverse microbial community.


Subject(s)
Anti-Bacterial Agents/analysis , Bacteria/genetics , Drug Resistance, Bacterial/genetics , Water Pollutants, Chemical/analysis , Bacteria/growth & development , Bacteria/isolation & purification , Environmental Monitoring , Erythromycin/analysis , Sulfamethazine/analysis , Sulfamethoxazole/analysis , Vietnam , Water Microbiology , Water Pollution, Chemical/statistics & numerical data
3.
Biochem Genet ; 47(5-6): 370-83, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19357945

ABSTRACT

The patterns of molecular evolution of the most diverse region of the apical membrane antigen 1 (AMA1) gene in Plasmodium falciparum from a Vietnamese subpopulation (Bao Loc) were investigated. Within the Bao Loc population, the sequenced gene region showed relatively high allelic and nucleotide diversity (0.985 and 0.02694, respectively). Further, the level of population recombination was substantial, resulting in a significant decay of linkage disequilibrium along the gene region. The results suggest that AMA1 is a useful genetic marker for studying the relationships between adaptation of parasite populations (to the human host immune system) and malaria epidemiology.


Subject(s)
Antigens, Protozoan/genetics , Membrane Proteins/genetics , Plasmodium falciparum/genetics , Polymorphism, Genetic , Protozoan Proteins/genetics , Animals , Base Sequence , DNA, Protozoan/chemistry , DNA, Protozoan/genetics , Gene Frequency , Genetic Variation , Genotype , Haplotypes , Humans , Linkage Disequilibrium , Malaria, Falciparum/parasitology , Plasmodium falciparum/isolation & purification , Sequence Analysis, DNA , Vietnam
4.
Environ Monit Assess ; 156(1-4): 69-72, 2009 Sep.
Article in English | MEDLINE | ID: mdl-18696239

ABSTRACT

White Spot Syndrome Virus (WSSV) is the major and most serious pathogen in shrimp aquaculture industries. By using a sensitive PCR-based detection technique followed by sequencing multiple PCR products for confirmation, we address to the question of whether WSSV can persist in shrimp ponds and surrounding areas after an outbreak. The seawater samples were taken from two shrimp ponds and surrounding canals in a coastal area in northern Vietnam, Quang Ninh Province where the shrimps cultured in the two ponds had been killed due to a WSSV outbreak in April 2001 and the ponds were thereafter abandoned. A total of 480 seawater samples (30 samples each for July and December of 2001 and 2002) were subjected to WSSV genome detection. Although the detection rates of WSSV genome were generally gradually declined in seawater environments of both diseased shrimp ponds and surrounding canals, WSSV was still detected with rates of more than 10% in the diseased ponds and lower in surrounding canals in December 2002, 20 months after the WSSV outbreak.


Subject(s)
Decapoda/virology , Environmental Monitoring , Seawater/virology , White spot syndrome virus 1/genetics , Animals , DNA, Viral/genetics , Genome, Viral/genetics , Polymerase Chain Reaction , White spot syndrome virus 1/isolation & purification
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