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1.
Planta ; 248(2): 381-391, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29744651

ABSTRACT

MAIN CONCLUSION: Recombinant wheat DHDPS was produced for the first time in milligram quantities and shown to be an enzymatically active tetramer in solution using analytical ultracentrifugation and small angle X-ray scattering. Wheat is an important cereal crop with an extensive role in global food supply. Given our rapidly growing population, strategies to increase the nutritional value and production of bread wheat are of major significance in agricultural science to satisfy our dietary requirements. Lysine is one of the most limiting essential amino acids in wheat, thus, a thorough understanding of lysine biosynthesis is of upmost importance to improve its nutritional value. Dihydrodipicolinate synthase (DHDPS; EC 4.3.3.7) catalyzes the first committed step in the lysine biosynthesis pathway of plants. Here, we report for the first time the expression and purification of recombinant DHDPS from the bread wheat Triticum aestivum (Ta-DHDPS). The optimized protocol yielded 36 mg of > 98% pure recombinant Ta-DHDPS per liter of culture. Enzyme kinetic studies demonstrate that the recombinant Ta-DHDPS has a KM (pyruvate) of 0.45 mM, KM (l-aspartate-4-semialdehyde) of 0.07 mM, kcat of 56 s-1, and is inhibited by lysine (IC 50 LYS of 0.033 mM), which agree well with previous studies using labor-intensive purification from wheat suspension cultures. We subsequently employed circular dichroism spectroscopy, analytical ultracentrifugation and small angle X-ray scattering to show that the recombinant enzyme is folded with 60% α/ß structure and exists as a 7.5 S tetrameric species with a Rg of 33 Å and Dmax of 118 Å. This study is the first to report the biophysical properties of the recombinant Ta-DHDPS in aqueous solution and offers an excellent platform for future studies aimed at improving nutritional value and primary production of bread wheat.


Subject(s)
Hydro-Lyases/chemistry , Hydro-Lyases/metabolism , Protein Engineering/methods , Recombinant Proteins/metabolism , Triticum/genetics , Bread , Circular Dichroism , Crystallization , Hydro-Lyases/genetics , Lysine/metabolism , Protein Folding , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Scattering, Small Angle , Solutions , Triticum/enzymology , X-Ray Diffraction
2.
Methods Enzymol ; 562: 205-23, 2015.
Article in English | MEDLINE | ID: mdl-26412653

ABSTRACT

Here, we review recent studies aimed at defining the importance of quaternary structure to a model oligomeric enzyme, dihydrodipicolinate synthase. This will illustrate the complementary and synergistic outcomes of coupling the techniques of analytical ultracentrifugation with enzyme kinetics, in vitro mutagenesis, macromolecular crystallography, small angle X-ray scattering, and molecular dynamics simulations, to demonstrate the role of subunit self-association in facilitating protein dynamics and enzyme function. This multitechnique approach has yielded new insights into the molecular evolution of protein quaternary structure.


Subject(s)
Bacterial Proteins/chemistry , Hydro-Lyases/chemistry , Plant Proteins/chemistry , Bacterial Proteins/isolation & purification , Evolution, Molecular , Hydro-Lyases/isolation & purification , Kinetics , Molecular Dynamics Simulation , Plant Proteins/isolation & purification , Protein Multimerization , Protein Structure, Quaternary , Protein Subunits , Scattering, Small Angle , Ultracentrifugation , X-Ray Diffraction
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