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1.
Sci Rep ; 14(1): 16851, 2024 07 22.
Article in English | MEDLINE | ID: mdl-39039102

ABSTRACT

Amyotrophic lateral sclerosis (ALS) is a debilitating neurodegenerative condition leading to progressive muscle weakness, atrophy, and ultimately death. Traditional ALS clinical evaluations often depend on subjective metrics, making accurate disease detection and monitoring disease trajectory challenging. To address these limitations, we developed the nQiALS toolkit, a machine learning-powered system that leverages smartphone typing dynamics to detect and track motor impairment in people with ALS. The study included 63 ALS patients and 30 age- and sex-matched healthy controls. We introduce the three core components of this toolkit: the nQiALS-Detection, which differentiated ALS from healthy typing patterns with an AUC of 0.89; the nQiALS-Progression, which separated slow and fast progression at specific thresholds with AUCs ranging between 0.65 and 0.8; and the nQiALS-Fine Motor, which identified subtle progression in fine motor dysfunction, suggesting earlier prediction than the state-of-the-art assessment. Together, these tools represent an innovative approach to ALS assessment, offering a complementary, objective metric to traditional clinical methods and which may reshape our understanding and monitoring of ALS progression.


Subject(s)
Amyotrophic Lateral Sclerosis , Disease Progression , Smartphone , Amyotrophic Lateral Sclerosis/diagnosis , Amyotrophic Lateral Sclerosis/physiopathology , Humans , Female , Male , Middle Aged , Aged , Machine Learning , Case-Control Studies
2.
J Am Med Inform Assoc ; 31(6): 1239-1246, 2024 May 20.
Article in English | MEDLINE | ID: mdl-38497957

ABSTRACT

OBJECTIVE: Passive monitoring of touchscreen interactions generates keystroke dynamic signals that can be used to detect and track neurological conditions such as Parkinson's disease (PD) and psychomotor impairment with minimal burden on the user. However, this typically requires datasets with clinically confirmed labels collected in standardized environments, which is challenging, especially for a large subject pool. This study validates the efficacy of a self-supervised learning method in reducing the reliance on labels and evaluates its generalizability. MATERIALS AND METHODS: We propose a new type of self-supervised loss combining Barlow Twins loss, which attempts to create similar feature representations with reduced feature redundancy for samples coming from the same subject, and a Dissimilarity loss, which promotes uncorrelated features for samples generated by different subjects. An encoder is first pre-trained using this loss on unlabeled data from an uncontrolled setting, then fine-tuned with clinically validated data. Our experiments test the model generalizability with controls and subjects with PD on 2 independent datasets. RESULTS: Our approach showed better generalization compared to previous methods, including a feature engineering strategy, a deep learning model pre-trained on Parkinsonian signs, and a traditional supervised model. DISCUSSION: The absence of standardized data acquisition protocols and the limited availability of annotated datasets compromise the generalizability of supervised models. In these contexts, self-supervised models offer the advantage of learning more robust patterns from the data, bypassing the need for ground truth labels. CONCLUSION: This approach has the potential to accelerate the clinical validation of touchscreen typing software for neurodegenerative diseases.


Subject(s)
Parkinson Disease , Supervised Machine Learning , Humans , Parkinson Disease/diagnosis , Male , Female , Aged , Algorithms , Middle Aged
3.
Mov Disord Clin Pract ; 10(10): 1530-1535, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37868929

ABSTRACT

Background: The nQiMechPD algorithm transforms natural typing data into a numerical index that characterizes motor impairment in people with Parkinson's Disease (PwPD). Objectives: Use nQiMechPD to compare asymmetrical progression of PD-related impairment in dominant (D-PD) versus non-dominant side onset (ND-PD) de-novo patients. Methods: Keystroke data were collected from 53 right-handed participants (15 D-PD, 13 ND-PD, 25 controls). We apply linear mixed effects modeling to evaluate participants' right, left, and both hands nQiMechPD relative change by group. Results: The 6-month nQiMechPD trajectories of right (**P = 0.002) and both (*P = 0.043) hands showed a significant difference in nQiMechPD trends between D-PD and ND-PD participants. Left side trends were not significantly different between these two groups (P = 0.328). Conclusions: Significant differences between D-PD and ND-PD groups were observed, likely driven by contrasting dominant hand trends. Our findings suggest disease onset side may influence motor impairment progression, medication response, and functional outcomes in PwPD.

4.
Brain Commun ; 4(4): fcac194, 2022.
Article in English | MEDLINE | ID: mdl-35950091

ABSTRACT

Measuring cognitive function is essential for characterizing brain health and tracking cognitive decline in Alzheimer's Disease and other neurodegenerative conditions. Current tools to accurately evaluate cognitive impairment typically rely on a battery of questionnaires administered during clinical visits which is essential for the acquisition of repeated measurements in longitudinal studies. Previous studies have shown that the remote data collection of passively monitored daily interaction with personal digital devices can measure motor signs in the early stages of synucleinopathies, as well as facilitate longitudinal patient assessment in the real-world scenario with high patient compliance. This was achieved by the automatic discovery of patterns in the time series of keystroke dynamics, i.e. the time required to press and release keys, by machine learning algorithms. In this work, our hypothesis is that the typing patterns generated from user-device interaction may reflect relevant features of the effects of cognitive impairment caused by neurodegeneration. We use machine learning algorithms to estimate cognitive performance through the analysis of keystroke dynamic patterns that were extracted from mechanical and touchscreen keyboard use in a dataset of cognitively normal (n = 39, 51% male) and cognitively impaired subjects (n = 38, 60% male). These algorithms are trained and evaluated using a novel framework that integrates items from multiple neuropsychological and clinical scales into cognitive subdomains to generate a more holistic representation of multifaceted clinical signs. In our results, we see that these models based on typing input achieve moderate correlations with verbal memory, non-verbal memory and executive function subdomains [Spearman's ρ between 0.54 (P < 0.001) and 0.42 (P < 0.001)] and a weak correlation with language/verbal skills [Spearman's ρ 0.30 (P < 0.05)]. In addition, we observe a moderate correlation between our typing-based approach and the Total Montreal Cognitive Assessment score [Spearman's ρ 0.48 (P < 0.001)]. Finally, we show that these machine learning models can perform better by using our subdomain framework that integrates the information from multiple neuropsychological scales as opposed to using the individual items that make up these scales. Our results support our hypothesis that typing patterns are able to reflect the effects of neurodegeneration in mild cognitive impairment and Alzheimer's disease and that this new subdomain framework both helps the development of machine learning models and improves their interpretability.

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