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1.
PLoS One ; 9(4): e95192, 2014.
Article in English | MEDLINE | ID: mdl-24755770

ABSTRACT

Medical research is developing an ever greater need for comprehensive high-quality data generation to realize the promises of personalized health care based on molecular biomarkers. The nucleic acid proximity-based methods proximity ligation and proximity extension assays have, with their dual reporters, shown potential to relieve the shortcomings of antibodies and their inherent cross-reactivity in multiplex protein quantification applications. The aim of the present study was to develop a robust 96-plex immunoassay based on the proximity extension assay (PEA) for improved high throughput detection of protein biomarkers. This was enabled by: (1) a modified design leading to a reduced number of pipetting steps compared to the existing PEA protocol, as well as improved intra-assay precision; (2) a new enzymatic system that uses a hyper-thermostabile enzyme, Pwo, for uniting the two probes allowing for room temperature addition of all reagents and improved the sensitivity; (3) introduction of an inter-plate control and a new normalization procedure leading to improved inter-assay precision (reproducibility). The multiplex proximity extension assay was found to perform well in complex samples, such as serum and plasma, and also in xenografted mice and resuspended dried blood spots, consuming only 1 µL sample per test. All-in-all, the development of the current multiplex technique is a step toward robust high throughput protein marker discovery and research.


Subject(s)
Immunoassay/methods , Polymerase Chain Reaction/methods , Animals , Blood Proteins/metabolism , Cross Reactions , DNA-Directed DNA Polymerase/metabolism , Dried Blood Spot Testing , Enzyme Stability , Female , Heterografts , Humans , Mice, Nude , Oligonucleotides/metabolism , Sensitivity and Specificity , Temperature
2.
J Virol Methods ; 163(1): 116-22, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19751768

ABSTRACT

Recent outbreaks of avian influenza in different parts of the world have caused major economic losses for the poultry industry, affected wildlife seriously and present a significant threat even to human public health, due to the risk for zoonotic transmission. The ability to recognize avian influenza viruses (AIVs) early is of paramount importance to ensure that appropriate measures can be taken quickly to contain the outbreak. In this study, the performance of a proximity ligation assay (PLA) for the detection of AIV antigens in biological specimens was evaluated. It is shown that PLA: (i) as a novel principle of highly sensitive antigen detection is extending the arsenal of tools for the diagnosis of AIV; (ii) is very specific, nearly as sensitive as a commonly used reference real-time PCR assay, and four orders of magnitude more sensitive than a sandwich ELISA, utilizing the same antibody; (iii) avoids the necessity of nucleic acids extraction, which greatly facilitates high-throughput implementations; (iv) allows the use of inactivated samples, which safely can be transported from the field to diagnostic laboratories for further analysis. In summary, the results demonstrate that PLA is suited for rapid, accurate and early detection of AIV.


Subject(s)
Antigens, Viral/isolation & purification , Influenza A virus/isolation & purification , Influenza in Birds/diagnosis , Polymerase Chain Reaction/methods , Animals , Antigens, Viral/genetics , Antigens, Viral/immunology , Poultry/virology , Sensitivity and Specificity
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