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1.
J Biomed Opt ; 16(8): 086002, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21895314

ABSTRACT

We investigate the use of a frequency-domain reconstruction algorithm based on the nonuniform fast Fourier transform (NUFFT) for photoacoustic imaging (PAI). Standard algorithms based on the fast Fourier transform (FFT) are computationally efficient, but compromise the image quality by artifacts. In our previous work we have developed an algorithm for PAI based on the NUFFT which is computationally efficient and can reconstruct images with the quality known from temporal backprojection algorithms. In this paper we review imaging qualities, such as resolution, signal-to-noise ratio, and the effects of artifacts in real-world situations. Reconstruction examples show that artifacts are reduced significantly. In particular, image details with a larger distance from the detectors can be resolved more accurately than with standard FFT algorithms.


Subject(s)
Algorithms , Image Processing, Computer-Assisted/methods , Photoacoustic Techniques/methods , Animals , Artifacts , Embryo, Nonmammalian/anatomy & histology , Female , Fourier Analysis , Mice , Neoplasms/pathology , Phantoms, Imaging , Signal Processing, Computer-Assisted , Signal-To-Noise Ratio , Sutures , Zebrafish/anatomy & histology
2.
J Biomed Opt ; 16(3): 036007, 2011 Mar.
Article in English | MEDLINE | ID: mdl-21456870

ABSTRACT

In the present study, we evaluated the applicability of ex vivo photoacoustic imaging (PAI) on small animal organs. We used photoacoustic tomography (PAT) to visualize infarcted areas within murine hearts and compared these data to other imaging techniques [magnetic resonance imaging (MRI), micro-computed tomography] and histological slices. In order to induce ischemia, an in vivo ligation of the left anterior descending artery was performed on nine wild-type mice. After varying survival periods, the hearts were excised and fixed in formaldehyde. Samples were illuminated with nanosecond laser pulses delivered by a Nd:YAG pumped optical parametric oscillator. Ultrasound detection was achieved using a Mach-Zehnder interferometer (MZI) working as an integrating line detector. The voxel data were computed using a Fourier-domain based reconstruction algorithm, followed by inverse Radon transforms. The results clearly showed the capability of PAI to visualize myocardial infarction and to produce three-dimensional images with a spatial resolution of approximately 120 µm. Regions of affected muscle tissue in PAI corresponded well with the results of MRI and histology. Photoacoustic tomography utilizing a MZI for ultrasound detection allows for imaging of small tissue samples. Due to its high spatial resolution, good soft tissue contrast and comparatively low cost, PAT offers great potentials for imaging.


Subject(s)
Myocardial Infarction/diagnosis , Tomography, Optical/methods , Acoustics , Animals , Disease Models, Animal , Histological Techniques , Imaging, Three-Dimensional , Interferometry , Magnetic Resonance Imaging , Mice , Mice, Inbred C57BL , Myocardial Infarction/diagnostic imaging , Optical Phenomena , Ultrasonography , X-Ray Microtomography
3.
J Biomed Opt ; 15(2): 021307, 2010.
Article in English | MEDLINE | ID: mdl-20459229

ABSTRACT

A device for three-dimensional (3-D) photoacoustic tomography with resolution in the range of tens of micrometers is presented that uses a light beam for interferometric detection of acoustic waves. Reconstruction of the 3-D initial pressure distribution from the signals representing line integrals of the acoustic field is a two-step process. It uses an inversion of 2-D wave propagation to obtain line projections of the initial pressure distribution and the inverse Radon transform. The light beam, propagating freely in a water bath, is scanned either in an arc- or box-shaped curve around the object. Simulations are performed to compare the two scanning procedures. The projection images are obtained either using the filtered back projection algorithm for the pi-arc scanning mode or the frequency domain algorithm for the box scanning mode. While the former algorithm provides slightly better image quality, the latter is about 20 times faster. The ability of the photoacoustic tomography device to create 3-D images with constant resolution throughout the reconstruction volume is demonstrated experimentally using a human hair phantom. These measurements revealed a 3-D resolution below 100 mum. In a second experiment, 3-D imaging of an isolated mouse heart is demonstrated to show the applicability for preclinical and biological research.


Subject(s)
Algorithms , Echocardiography/instrumentation , Elasticity Imaging Techniques/instrumentation , Imaging, Three-Dimensional/instrumentation , Interferometry/instrumentation , Tomography, Optical/instrumentation , Animals , Computer-Aided Design , Equipment Design , Equipment Failure Analysis , Mice , Reproducibility of Results , Sensitivity and Specificity
4.
Article in English | MEDLINE | ID: mdl-19584002

ABSTRACT

For the erythroid cell lineage development in vertebrates, GATA-1 transcription factor is essential. In our report, we have demonstrated that the approximate developmental status of erythrocytes and the progression of blood formation can be studied non-invasively in GATA-1:DsRed transgenic zebrafish (Danio rerio) embryo and larva by characterization of fluorescence luminance spectra. The study was carried out for animals maintained under normoxic and hypoxic (152 and 20 torr PO(2) respectively) conditions up to 10 days post-fertilization (dpf) and total blood cell concentrations and fluorescent cells' percentage were determined for this purpose. The erythroids were classified into five intensity stages (IS) on the basis of their fluorescence intensity. The luminescent cells with medium intensities (IS3) in normoxic animals were found throughout 2 to 10 dpf although in lower quantity while in hypoxic group they appeared from 5 dpf to 10 dpf showing a maximum of 15% of the total luminescent cells at 8 dpf. The total blood cell concentration dropped after 8 dpf in contrast to hypoxic group which showed further increasing trend. The fluorescent cells' percentage in normoxic group was generally higher as compared to the hypoxic ones. Our method successfully defined various stages of erythroid development. An effort was also made to correlate our luminance data (GATA-1 expression) and total blood cell concentrations with Epo mRNA production. Quantitative RT-PCR of 2-15 dpf old zebrafish was carried out for this purpose. Normoxic animals showed 1-3 Epo mRNA copies per ng RNA in contrast to the hypoxic larvae that showed remarkable fluctuation of 1 to 12 Epo mRNA copies per ng RNA during development. The blood volume (aortic diameter) and production time scale proved to be important factors to define the relationship of Epo mRNA with total blood cell concentration and GATA-1 protein expression respectively.


Subject(s)
Blood Volume/physiology , Erythropoiesis/physiology , Zebrafish/growth & development , Animals , Animals, Genetically Modified , Aorta/ultrastructure , Blood Cell Count , Erythrocyte Volume , Erythropoietin/metabolism , Fluorescent Dyes , GATA1 Transcription Factor/genetics , GATA1 Transcription Factor/metabolism , Gene Expression Regulation , Genes, Reporter , Larva/growth & development , Microscopy, Interference , Oxygen/physiology , Promoter Regions, Genetic , RNA, Messenger/metabolism , Vasodilation/physiology , Zebrafish/embryology , Zebrafish/physiology , Zebrafish Proteins/genetics , Zebrafish Proteins/metabolism
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