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1.
NMR Biomed ; : e5195, 2024 Jun 06.
Article in English | MEDLINE | ID: mdl-38845018

ABSTRACT

The neuronal tricarboxylic acid and glutamate/glutamine (Glu/Gln) cycles play important roles in brain function. These processes can be measured in vivo using dynamic 1H-[13C] MRS during administration of 13C-labeled glucose. Proton-observed carbon-edited (POCE) MRS enhances the signal-to-noise ratio (SNR) compared with direct 13C-MRS. Ultra-high field further boosts the SNR and increases spectral dispersion; however, even at 7 T, Glu and Gln 1H-resonances may overlap. Further gain can be obtained with selective POCE (selPOCE). Our aim was to create a setup for indirect dynamic 1H-[13C] MRS in the human brain at 7 T. A home-built non-shielded transmit-receive 13C-birdcage head coil with eight transmit-receive 1H-dipole antennas was used together with a 32-channel 1H-receive array. Electromagnetic simulations were carried out to ensure that acquisitions remained within local and global head SAR limits. POCE-MRS was performed using slice-selective excitation with semi-localization by adiabatic selective refocusing (sLASER) and stimulated echo acquisition mode (STEAM) localization, and selPOCE-MRS using STEAM. Sequences were tested in a phantom containing non-enriched Glu and Gln, and in three healthy volunteers during uniformly labeled 13C-glucose infusions. In one subject the voxel position was alternated between bi-frontal and bi-occipital placement within one session. [4-13C]Glu-H4 and [4-13C]Gln-H4 signals could be separately detected using both STEAM-POCE and STEAM-selPOCE in the phantom. In vivo, [4,5-13C]Glx could be detected using both sLASER-POCE and STEAM-POCE, with similar sensitivities, but [4,5-13C]Glu and [4,5-13C]Gln signals could not be completely resolved. STEAM-POCE was alternately performed bi-frontal and bi-occipital within a single session without repositioning of the subject, yielding similar results. With STEAM-selPOCE, [4,5-13C]Glu and [4,5-13C]Gln could be clearly separated. We have shown that with our setup indirect dynamic 1H-[13C] MRS at 7 T is feasible in different locations in the brain within one session, and by using STEAM-selPOCE it is possible to separate Glu from Gln in vivo while obtaining high quality spectra.

2.
NMR Biomed ; 37(6): e5122, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38369653

ABSTRACT

Amide proton transfer weighted (APTw) imaging enables in vivo assessment of tissue-bound mobile proteins and peptides through the detection of chemical exchange saturation transfer. Promising applications of APTw imaging have been shown in adult brain tumors. As pediatric brain tumors differ from their adult counterparts, we investigate the radiological appearance of pediatric brain tumors on APTw imaging. APTw imaging was conducted at 3 T. APTw maps were calculated using magnetization transfer ratio asymmetry at 3.5 ppm. First, the repeatability of APTw imaging was assessed in a phantom and in five healthy volunteers by calculating the within-subject coefficient of variation (wCV). APTw images of pediatric brain tumor patients were analyzed retrospectively. APTw levels were compared between solid tumor tissue and normal-appearing white matter (NAWM) and between pediatric high-grade glioma (pHGG) and pediatric low-grade glioma (pLGG) using t-tests. APTw maps were repeatable in supratentorial and infratentorial brain regions (wCV ranged from 11% to 39%), except those from the pontine region (wCV between 39% and 50%). APTw images of 23 children with brain tumor were analyzed (mean age 12 years ± 5, 12 male). Significantly higher APTw values are present in tumor compared with NAWM for both pHGG and pLGG (p < 0.05). APTw values were higher in pLGG subtype pilocytic astrocytoma compared with other pLGG subtypes (p < 0.05). Non-invasive characterization of pediatric brain tumor biology with APTw imaging could aid the radiologist in clinical decision-making.


Subject(s)
Amides , Brain Neoplasms , Phantoms, Imaging , Protons , Humans , Child , Male , Female , Brain Neoplasms/diagnostic imaging , Brain Neoplasms/pathology , Adolescent , Magnetic Resonance Imaging/methods , Glioma/diagnostic imaging , Glioma/pathology , Reproducibility of Results , Child, Preschool
3.
Magn Reson Med ; 87(2): 872-883, 2022 02.
Article in English | MEDLINE | ID: mdl-34520077

ABSTRACT

PURPOSE: Current challenges of in vivo CEST imaging include overlapping signals from different pools. The overlap arises from closely resonating pools and/or the broad magnetization transfer contrast (MTC) from macromolecules. This study aimed to evaluate the feasibility of variable delay multipulse (VDMP) CEST to separately assess solute pools with different chemical exchange rates in the human brain in vivo, while mitigating the MTC. METHODS: VDMP saturation buildup curves were simulated for amines, amides, and relayed nuclear Overhauser effect. VDMP data were acquired from glutamate and bovine serum albumin phantoms, and from six healthy volunteers at 7T. For the in vivo data, MTC removal was performed via a three-pool Lorentzian fitting. Different B1 amplitudes and mixing times were used to evaluate CEST pools with different exchange rates. RESULTS: The results show the importance of removing MTC when applying VDMP in vivo and the influence of B1 for distinguishing different pools. Finally, the optimal B1 and mixing times to effectively saturate slow- and fast-exchanging components are also reported. Slow-exchanging amides and rNOE components could be distinguished when using B1 = 1 µT and tmix = 10 ms and 40 ms, respectively. Fast-exchanging components reached the highest saturation when using a B1 = 2.8 µT and tmix = 0 ms. CONCLUSION: VDMP is a powerful CEST-editing tool, exploiting chemical exchange-rate differences. After MTC removal, it allows separate assessment of slow- and fast-exchanging solute pools in in vivo human brain.


Subject(s)
Brain , Magnetic Resonance Imaging , Amides , Amines , Brain/diagnostic imaging , Humans , Phantoms, Imaging
4.
NMR Biomed ; 34(6): e4491, 2021 06.
Article in English | MEDLINE | ID: mdl-33567471

ABSTRACT

Ultrahigh field magnetic resonance imaging facilitates high spatiotemporal resolution that benefits from increasing the number of receiver elements. Because high-density receiver arrays have a relatively small element size compared with the transmitter, a side effect is that such setups cause low flux coupling between the transmitter and receiver. Moreover, when transmitters are designed in a multitransmit configuration, their relative size is much smaller than the sample, reducing coupling to the sample and thereby potentially also the coupling to the receivers. Transmitters are traditionally detuned during reception. In this study, we investigate, for a 32-channel receiver head array at 7 T, if transmitter detuning of a quadrature birdcage or of an eight-channel transmit coil can be omitted without substantially sacrificing signal-to-noise ratio (SNR). The transmit elements are operated once with and once without detuning and, in the latter, the received signals are either merged with the array or excluded for image reconstruction. For each of the three measurements, SNR and 1/g-factor maps are investigated. The tuning of the quadrature and eight-channel transmit coils during signal reception introduced a 10.1% and 6.5% penalty in SNR, respectively, relative to the SNR received with detuned transmitters. When also incorporating the signal of the transmit coils, the SNR was regained to 98.5% or 101.4% for the quadrature and eight-channel coil, respectively, relative to the detuned transmitters, while the 1/g-factor maps improved slightly. For the 32-channel receive coil used the SNR penalty can become negligible when omitting detuning of the transmit coils. This not only simplifies transmit coil designs, potentially increasing their efficiency, but also enables the transmitters to be used as receivers in parallel to the receiver array, thus increasing parallel imaging performance.


Subject(s)
Magnetic Resonance Imaging/instrumentation , Acceleration , Brain/diagnostic imaging , Humans , Phantoms, Imaging , Radio Waves , Signal-To-Noise Ratio
5.
MAGMA ; 34(3): 377-387, 2021 Jun.
Article in English | MEDLINE | ID: mdl-32954447

ABSTRACT

OBJECTIVES: Renal multiparametric MRI (mpMRI) is a promising tool to monitor renal allograft health to enable timely treatment of chronic allograft nephropathy. This study aims to validate mpMRI by whole-kidney histology following transplantectomy. MATERIALS AND METHODS: A patient with kidney transplant failure underwent mpMRI prior to transplantectomy. The mpMRI included blood oxygenation level-dependent (BOLD) MRI, T1 and T2 mapping, diffusion-weighted imaging (DWI), 2D phase contrast (2DPC) and arterial spin labeling (ASL). Parenchymal mpMRI measures were compared to normative values obtained in 19 healthy controls. Differences were expressed in standard deviations (SD) of normative values. The mpMRI measures were compared qualitatively to histology. RESULTS: The mpMRI showed a heterogeneous parenchyma consistent with extensive interstitial hemorrhage on histology. A global increase in T1 (+ 3.0 SD) and restricted diffusivity (- 3.6 SD) were consistent with inflammation and fibrosis. Decreased T2 (- 1.8 SD) indicated fibrosis or hemorrhage. ASL showed diminished cortical perfusion (- 2.9 SD) with patent proximal arteries. 2DPC revealed a 69% decrease in renal perfusion. Histological evaluation showed a dense inflammatory infiltrate and fibrotic changes, consistent with mpMRI results. Most interlobular arteries were obliterated while proximal arteries were patent, consistent with ASL findings. DISCUSSION: mpMRI findings correlated well with histology both globally as well as locally.


Subject(s)
Kidney Transplantation , Multiparametric Magnetic Resonance Imaging , Humans , Kidney , Male , Nephrectomy , Prostatic Neoplasms
6.
J Magn Reson Imaging ; 53(3): 859-873, 2021 03.
Article in English | MEDLINE | ID: mdl-32297700

ABSTRACT

BACKGROUND: Renal multiparametric magnetic resonance imaging (MRI) is a promising tool for diagnosis, prognosis, and treatment monitoring in kidney disease. PURPOSE: To determine intrasubject test-retest repeatability of renal MRI measurements. STUDY TYPE: Prospective. POPULATION: Nineteen healthy subjects aged over 40 years. FIELD STRENGTH/SEQUENCES: T1 and T2 mapping, R2 * mapping or blood oxygenation level-dependent (BOLD) MRI, diffusion tensor imaging (DTI), and intravoxel incoherent motion (IVIM) diffusion-weighted imaging (DWI), 2D phase contrast, arterial spin labelling (ASL), dynamic contrast enhanced (DCE) MRI, and quantitative Dixon for fat quantification at 3T. ASSESSMENT: Subjects were scanned twice with ~1 week between visits. Total scan time was ~1 hour. Postprocessing included motion correction, semiautomated segmentation of cortex and medulla, and fitting of the appropriate signal model. STATISTICAL TEST: To assess the repeatability, a Bland-Altman analysis was performed and coefficients of variation (CoVs), repeatability coefficients, and intraclass correlation coefficients were calculated. RESULTS: CoVs for relaxometry (T1 , T2 , R2 */BOLD) were below 6.1%, with the lowest CoVs for T2 maps and highest for R2 */BOLD. CoVs for all diffusion analyses were below 7.2%, except for perfusion fraction (FP ), with CoVs ranging from 18-24%. The CoV for renal sinus fat volume and percentage were both around 9%. Perfusion measurements were most repeatable with ASL (cortical perfusion only) and 2D phase contrast with CoVs of 10% and 13%, respectively. DCE perfusion had a CoV of 16%, while single kidney glomerular filtration rate (GFR) had a CoV of 13%. Repeatability coefficients (RCs) ranged from 7.7-87% (lowest/highest values for medullary mean diffusivity and cortical FP , respectively) and intraclass correlation coefficients (ICCs) ranged from -0.01 to 0.98 (lowest/highest values for cortical FP and renal sinus fat volume, respectively). DATA CONCLUSION: CoVs of most MRI measures of renal function and structure (with the exception of FP and perfusion as measured by DCE) were below 13%, which is comparable to standard clinical tests in nephrology. LEVEL OF EVIDENCE: 2 TECHNICAL EFFICACY: Stage 1.


Subject(s)
Kidney/diagnostic imaging , Multiparametric Magnetic Resonance Imaging/methods , Adult , Diffusion , Female , Glomerular Filtration Rate , Healthy Volunteers , Humans , Image Interpretation, Computer-Assisted/methods , Image Processing, Computer-Assisted , Male , Middle Aged , Models, Statistical , Motion , Perfusion , Prognosis , Prospective Studies , Reproducibility of Results , Spin Labels
7.
Dev Cogn Neurosci ; 45: 100816, 2020 10.
Article in English | MEDLINE | ID: mdl-33040972

ABSTRACT

The YOUth cohort study is a unique longitudinal study on brain development in the general population. As part of the YOUth study, 2000 children will be included at 8, 9 or 10 years of age and planned to return every three years during adolescence. Magnetic resonance imaging (MRI) brain scans are collected, including structural T1-weighted imaging, diffusion-weighted imaging (DWI), resting-state functional MRI and task-based functional MRI. Here, we provide a comprehensive report of the MR acquisition in YOUth Child & Adolescent including the test-retest reliability of brain measures derived from each type of scan. To measure test-retest reliability, 17 adults were scanned twice with a week between sessions using the full YOUth MRI protocol. Intraclass correlation coefficients were calculated to quantify reliability. Global brain measures derived from structural T1-weighted and DWI scans were reliable. Resting-state functional connectivity was moderately reliable, as well as functional brain measures for both the inhibition task (stop versus go) and the emotion task (face versus house). Our results complement previous studies by presenting reliability results of regional brain measures collected with different MRI modalities. YOUth facilitates data sharing and aims for reliable and high-quality data. Here we show that using the state-of-the art YOUth MRI protocol brain measures can be estimated reliably.


Subject(s)
Magnetic Resonance Imaging/methods , Reproducibility of Results , Child , Cohort Studies , Female , Humans , Longitudinal Studies , Male
8.
Mol Psychiatry ; 25(7): 1559-1568, 2020 07.
Article in English | MEDLINE | ID: mdl-30867562

ABSTRACT

Electroconvulsive therapy (ECT) is the most effective treatment for depression, yet its working mechanism remains unclear. In the animal analog of ECT, neurogenesis in the dentate gyrus (DG) of the hippocampus is observed. In humans, volume increase of the hippocampus has been reported, but accurately measuring the volume of subfields is limited with common MRI protocols. If the volume increase of the hippocampus in humans is attributable to neurogenesis, it is expected to be exclusively present in the DG, whereas other processes (angiogenesis, synaptogenesis) also affect other subfields. Therefore, we acquired an optimized MRI scan at 7-tesla field strength allowing sensitive investigation of hippocampal subfields. A further increase in sensitivity of the within-subjects measurements is gained by automatic placement of the field of view. Patients receive two MRI scans: at baseline and after ten bilateral ECT sessions (corresponding to a 5-week interval). Matched controls are also scanned twice, with a similar 5-week interval. A total of 31 participants (23 patients, 8 controls) completed the study. A large and significant increase in DG volume was observed after ECT (M = 75.44 mm3, std error = 9.65, p < 0.001), while other hippocampal subfields were unaffected. We note that possible type II errors may be present due to the small sample size. In controls no changes in volume were found. Furthermore, an increase in DG volume was related to a decrease in depression scores, and baseline DG volume predicted clinical response. These findings suggest that the volume change of the DG is related to the antidepressant properties of ECT, and may reflect neurogenesis.


Subject(s)
Dentate Gyrus , Depression/pathology , Depression/therapy , Electroconvulsive Therapy , Organ Size , Dentate Gyrus/cytology , Dentate Gyrus/pathology , Female , Humans , Magnetic Resonance Imaging , Male , Middle Aged
9.
J Magn Reson Imaging ; 52(2): 622-631, 2020 08.
Article in English | MEDLINE | ID: mdl-31799793

ABSTRACT

BACKGROUND: Gadolinium-based contrast agents (GBCAs) are widely used in MRI, despite safety concerns regarding deposition in brain and other organs. In animal studies gadolinium was detected for weeks after administration in the kidneys, but this has not yet been demonstrated in humans. PURPOSE: To find evidence for the prolonged presence of gadobutrol in the kidneys in healthy volunteers. STUDY TYPE: Combined retrospective and prospective analysis of a repeatability study. POPULATION: Twenty-three healthy volunteers with normal renal function (12 women, age range 40-76 years), of whom 21 were used for analysis. FIELD STRENGTH/SEQUENCE: Inversion recovery-based T1 map at 3T. ASSESSMENT: T1 maps were obtained twice with a median interval of 7 (range: 4-16) days. The T1 difference (ΔT1 ) between both scans was compared between the gadolinium group (n = 16, 0.05 mmol/kg gadobutrol administered after T1 mapping during both scan sessions) and the control group (n = 5, no gadobutrol). T1 maps were analyzed separately for cortex and medulla. STATISTICAL TESTS: Mann-Whitney U-tests to detect differences in ΔT1 between groups and linear regression to relate time between scans and estimated glomerular filtration rate (eGFR) to ΔT1 . RESULTS: ΔT1 differed significantly between the gadolinium and control group: median ΔT1 cortex -98 vs. 7 msec (P < 0.001) and medulla -68 msec vs. 19 msec (P = 0.001), respectively. The bias corresponds to renal gadobutrol concentrations of 8 nmol/g tissue (cortex) and 4 nmol/g tissue (medulla), ie, ~2.4 µmol for both kidneys (0.05% of original dose). ΔT1 correlated in the gadolinium group with duration between acquisitions for both cortex (regression coefficient (ß) 16.5 msec/day, R2 0.50, P < 0.001) and medulla (ß 11.5 msec/day, R2 0.32, P < 0.001). Medullary ΔT1 correlated with eGFR (ß 1.13 msec/(ml/min) R2 0.25, P = 0.008). DATA CONCLUSION: We found evidence of delayed renal gadobutrol excretion after a single contrast agent administration in subjects with normal renal function. Even within this healthy population, elimination delay increased with decreasing kidney function. LEVEL OF EVIDENCE: 3 Technical Efficacy: Stage 3 J. Magn. Reson. Imaging 2020;52:622-631.


Subject(s)
Organometallic Compounds , Adult , Aged , Animals , Contrast Media , Female , Healthy Volunteers , Humans , Kidney/diagnostic imaging , Magnetic Resonance Imaging , Middle Aged , Prospective Studies , Retrospective Studies
10.
World Neurosurg ; 126: e250-e258, 2019 Jun.
Article in English | MEDLINE | ID: mdl-30797931

ABSTRACT

BACKGROUND: Ultra-high-field magnetic resonance imaging (MRI) of the brain is attractive for image guidance during neurosurgery because of its high tissue contrast and detailed vessel visualization. However, high-field MRI is prone to distortion artifacts, which may compromise image guidance. Here we investigate intra- and extracranial distortions in 7-T MRI scans. METHODS: Five patients with and 5 patients without skin-adhesive fiducials received magnetization-prepared T1-weighted 7-T MRI and standard 3-T MRI scans. The 7- and 3-T images were rigidly coregistered and compared. Intracranial distortions were evaluated qualitatively, whereas shifts at the skin surface and shifts of the center positions of skin-adhesive fiducials were measured quantitatively. Moreover, we present an illustrative case of an ultra-high-field image-guided skull base meningioma resection. RESULTS: We found excellent intracranial correspondence between 3- and 7-T MRI scans. However, the average maximum skin shift was 6.8 ± 2.0 mm in group A and 5.2 ± 0.9 mm in group B. The average maximum difference between the skin-adhesive fiducial positions was 5.6 ± 3.1 mm in group B. In our tumor resection case, the meningioma blood supply could be targeted early thanks to 7-T image guidance, which made subsequent tumor removal straightforward. CONCLUSIONS: There are no visible intracranial distortions in magnetization-prepared T1-weighted 7-T MRI cranial images. However, we found considerable extracranial shifts. These shifts render 7-T images unreliable for patient-to-image registration. We recommend performing patient-to-image registration on a routine (computed tomography scan or 3-T magnetic resonance) image and subsequently fusing the 7-T magnetic resonance image with the routine image on the image guidance machine, until this issue is resolved.


Subject(s)
Magnetic Resonance Imaging/methods , Neurosurgical Procedures/methods , Surgery, Computer-Assisted/methods , Adhesives , Adult , Aged , Aged, 80 and over , Artifacts , Electromagnetic Fields , Female , Humans , Male , Meningioma/blood supply , Meningioma/diagnostic imaging , Meningioma/surgery , Phantoms, Imaging , Reproducibility of Results , Skull Base Neoplasms/blood supply , Skull Base Neoplasms/diagnostic imaging , Skull Base Neoplasms/surgery
11.
Sci Rep ; 9(1): 1089, 2019 01 31.
Article in English | MEDLINE | ID: mdl-30705355

ABSTRACT

Chemical exchange saturation transfer (CEST) exploits the chemical exchange of labile protons of an endogenous or exogenous compound with water to image the former indirectly through the water signal. Z-spectra of the brain have traditionally been analyzed for two most common saturation phenomena: downfield amide proton transfer (APT) and upfield nuclear Overhauser enhancement (NOE). However, a great body of brain metabolites, many of interest in neurology and oncology, contributes to the downfield saturation in Z-spectra. The extraction of these "hidden" metabolites from Z-spectra requires careful design of CEST sequences and data processing models, which is only possible by first obtaining CEST signatures of the brain metabolites possessing labile protons. In this work, we measured exchange rates of all major-for-CEST brain metabolites in the physiological pH range at 37 °C. Analysis of their contributions to Z-spectra revealed that regardless of the main magnetic field strength and pH, five main contributors, i.e. myo-inositol, creatine, phosphocreatine, glutamate, and mobile (poly)peptides, account for ca. 90% of downfield CEST effect. The fundamental CEST parameters presented in this study can be exploited in the design of novel CEST sequences and Z-spectra processing models, which will enable simultaneous and quantitative CEST imaging of multiple metabolites: multicolor CEST.


Subject(s)
Brain/metabolism , Metabolome , Animals , Hydrogen-Ion Concentration , Magnetic Resonance Spectroscopy , Organophosphorus Compounds
12.
Magn Reson Imaging ; 51: 128-136, 2018 09.
Article in English | MEDLINE | ID: mdl-29747015

ABSTRACT

A method is described to design parallel transmit (PTX) excitation pulses that are compatible with turbo spin echo (TSE) sequences, based on information available from conventional per-channel B1+ mapping. The excitation phase of PTX pulses that generate a reduced field of excitation (rFOX) is matched to the phase the quadrature mode of a PTX coil. This enables TSE imaging of a PTX-enabled rFOX excitation combined with standard nonselective refocusing pulses transmitted in the quadrature mode. In-vivo imaging experiments were performed at 7T using a dual channel parallel transmit head coil. In combination with simulations, the CPMG-required excitation phase was confirmed in TSE sequences with refocusing pulses of variable flip angle. Further experiments showed that the same rFOX was generated in TSE and gradient echo sequences, enabling high-resolution imaging with parallel imaging acceleration of the rFOX.


Subject(s)
Brain/physiology , Image Interpretation, Computer-Assisted/methods , Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Algorithms , Brain/anatomy & histology , Humans , Reference Values , Spin Labels
13.
Magn Reson Med ; 80(4): 1533-1545, 2018 10.
Article in English | MEDLINE | ID: mdl-29476551

ABSTRACT

PURPOSE: Image quality obtained for brain imaging at 7T can be hampered by inhomogeneities in the static magnetic field, B0 , and the RF electromagnetic field, B1 . In imaging sequences such as fluid-attenuated inversion recovery (FLAIR), which is used to assess neurological disorders, these inhomogeneities cause spatial variations in signal that can reduce clinical efficacy. In this work, we aim to correct for signal inhomogeneities to ensure whole-brain coverage with 3D FLAIR at 7T. METHODS: The direct signal control (DSC) framework was used to optimize channel weightings applied to the 8 transmit channels used in this work on a pulse-by-pulse basis through the echo train in the FLAIR sequences. 3D FLAIR brain images were acquired on 5 different subjects and compared with imaging using a quadrature-like mode of the transmit array. Precomputed "universal" DSC solutions calculated from a separate set of 5 subjects were also explored. RESULTS: DSC consistently enabled improved imaging across all subjects, with no dropouts in signal seen over the entire brain volume, which contrasted with imaging in quadrature mode. Further, the universal DSC solutions also consistently improved imaging despite not being optimized specifically for the subject being imaged. CONCLUSION: 3D FLAIR brain imaging at 7T is substantially improved using DSC and is able to recover regions of low signal without increasing imaging time or interecho spacing.


Subject(s)
Brain/diagnostic imaging , Imaging, Three-Dimensional/methods , Magnetic Resonance Imaging/methods , Signal Processing, Computer-Assisted , Humans
14.
Magn Reson Med ; 80(1): 126-136, 2018 07.
Article in English | MEDLINE | ID: mdl-29154463

ABSTRACT

PURPOSE: To detect neuronal activity-evoked pH changes by amide proton transfer-chemical exchange saturation transfer (APT-CEST) MRI at 7 T. METHODS: Three healthy subjects participated in the study. A low-power 3-dimensional APT-CEST sequence was optimized through the Bloch-McConnell equations. pH sensitivity of the sequence was estimated both in phantoms and in vivo. The feasibility of pH-functional MRI was tested in Bloch-McConnell-simulated data using the optimized sequence. In healthy subjects, the visual stimuli were used to evoke transient pH changes in the visual cortex, and a 3-dimensional APT-CEST volume was acquired at the pH-sensitive frequency offset of 3.5 ppm every 12.6 s. RESULTS: In theory, a three-component general linear model was capable of separating the effects of blood oxygenation level-dependent contrast and pH. The Bloch-McConnell equations indicated that a change in pH of 0.03 should be measurable at the experimentally determined temporal signal-to-noise ratio of 108. However, only a blood oxygenation level-dependent effect in the visual cortex could be discerned during the visual stimuli experiments performed in the healthy subjects. CONCLUSIONS: The results of this study suggest that if indeed there are any transient brain pH changes in response to visual stimuli, those are under 0.03 units pH change, which is extremely difficult to detect using the existent techniques. Magn Reson Med 80:126-136, 2018. © 2017 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine. This is an open access article under the terms of the Creative Commons Attribution NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.


Subject(s)
Magnetic Resonance Imaging/methods , Neurons/pathology , Oxygen/blood , Algorithms , Brain/diagnostic imaging , Carbon Dioxide/chemistry , Computer Simulation , Contrast Media , Healthy Volunteers , Humans , Hydrogen-Ion Concentration , Image Interpretation, Computer-Assisted/methods , Image Processing, Computer-Assisted/methods , Imaging, Three-Dimensional , Models, Theoretical , Phantoms, Imaging , Protons , Reproducibility of Results
15.
Magn Reson Imaging ; 46: 56-63, 2018 02.
Article in English | MEDLINE | ID: mdl-29103975

ABSTRACT

Quantitative Magnetic Resonance Imaging (MRI) is based on a two-steps approach: estimation of the magnetic moments distribution inside the body, followed by a voxel-by-voxel quantification of the human tissue properties. This splitting simplifies the computations but poses several constraints on the measurement process, limiting its efficiency. Here, we perform quantitative MRI as a one step process; signal localization and parameter quantification are simultaneously obtained by the solution of a large scale nonlinear inversion problem based on first-principles. As a consequence, the constraints on the measurement process can be relaxed and acquisition schemes that are time efficient and widely available in clinical MRI scanners can be employed. We show that the nonlinear tomography approach is applicable to MRI and returns human tissue maps from very short experiments.


Subject(s)
Image Processing, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Positron-Emission Tomography/methods , Algorithms , Brain/diagnostic imaging , Fourier Analysis , Healthy Volunteers , Humans , Least-Squares Analysis , Models, Statistical , Signal Processing, Computer-Assisted , Software , Tomography, X-Ray Computed
16.
J Magn Reson Imaging ; 46(2): 497-504, 2017 08.
Article in English | MEDLINE | ID: mdl-28130811

ABSTRACT

PURPOSE: To evaluate whether brown adipose tissue (BAT) is present in middle-aged patients with cardiovascular comorbidities and to quantify how BAT presence associates with obesity and metabolic dysfunction. MATERIALS AND METHODS: Supraclavicular and subcutaneous adipose tissue fat-signal-fraction (FF) was determined with 1.5T water-fat magnetic resonance imaging (MRI) in 50 patients with coronary artery disease, cerebrovascular disease, or peripheral artery disease. The association between BAT presence, as measured by a higher FF difference between supraclavicular and subcutaneous adipose tissue, and obesity and metabolic dysfunction was quantified using multivariable linear regression. RESULTS: Supraclavicular adipose tissue displays a lower FF of 82.6% (interquartile range [IQR] 78.8-84.3) compared to 90.2% (IQR 87.3-91.9) in subcutaneous white adipose tissue (WAT, P < 0.0001). BAT presence was associated with less obesity and metabolic dysfunction. For example, 1 SD lower waist circumference (11.7 cm), 1 SD lower triglycerides (1.0 mmol/L), and absence of metabolic syndrome and type 2 diabetes were associated with 1.1% (95% confidence interval [CI] 0.1; 2.0), 1.1% (95% CI 0.1; 2.0), 2.1% (95% CI 0.1; 4.1), and 4.1% (95% CI 0.1; 7.1) higher FF difference between supraclavicular adipose tissue and subcutaneous WAT, respectively. CONCLUSION: Supraclavicular adipose tissue has BAT characteristics in adult patients with clinical manifest cardiovascular disease and BAT presence is associated with less obesity and a more favorable metabolic profile. LEVEL OF EVIDENCE: 2 Technical Efficacy: Stage 2 J. MAGN. RESON. IMAGING 2017;46:497-504.


Subject(s)
Adipose Tissue, Brown/diagnostic imaging , Cardiovascular Diseases/diagnostic imaging , Diabetes Mellitus, Type 2/diagnostic imaging , Magnetic Resonance Imaging , Adipose Tissue/diagnostic imaging , Adipose Tissue, White/diagnostic imaging , Aged , Cardiovascular Diseases/complications , Coronary Artery Disease/diagnostic imaging , Diabetes Complications/diagnostic imaging , Diabetes Mellitus, Type 2/complications , Female , Humans , Male , Middle Aged , Obesity/diagnostic imaging , Obesity/metabolism , Peripheral Arterial Disease/diagnostic imaging , Prospective Studies , Risk Factors , Subcutaneous Fat
17.
NMR Biomed ; 30(5)2017 May.
Article in English | MEDLINE | ID: mdl-28111824

ABSTRACT

High field MRI is beneficial for chemical exchange saturation transfer (CEST) in terms of high SNR, CNR, and chemical shift dispersion. These advantages may, however, be counter-balanced by the increased transmit field inhomogeneity normally associated with high field MRI. The relatively high sensitivity of the CEST contrast to B1 inhomogeneity necessitates the development of correction methods, which is essential for the clinical translation of CEST. In this work, two B1 correction algorithms for the most studied CEST effects, amide-CEST and nuclear Overhauser enhancement (NOE), were analyzed. Both methods rely on fitting the multi-pool Bloch-McConnell equations to the densely sampled CEST spectra. In the first method, the correction is achieved by using a linear B1 correction of the calculated amide and NOE CEST effects. The second method uses the Bloch-McConnell fit parameters and the desired B1 amplitude to recalculate the CEST spectra, followed by the calculation of B1 -corrected amide and NOE CEST effects. Both algorithms were systematically studied in Bloch-McConnell equations and in human data, and compared with the earlier proposed ideal interpolation-based B1 correction method. In the low B1 regime of 0.15-0.50 µT (average power), a simple linear model was sufficient to mitigate B1 inhomogeneity effects on a par with the interpolation B1 correction, as demonstrated by a reduced correlation of the CEST contrast with B1 in both the simulations and the experiments.


Subject(s)
Amides/metabolism , Artifacts , Brain/anatomy & histology , Brain/metabolism , Magnetic Resonance Imaging/methods , Molecular Imaging/methods , Signal Processing, Computer-Assisted , Algorithms , Humans , Image Enhancement/methods , Magnetic Resonance Spectroscopy/methods , Reproducibility of Results , Sensitivity and Specificity
18.
Magn Reson Med ; 77(1): 361-373, 2017 01.
Article in English | MEDLINE | ID: mdl-26800383

ABSTRACT

PURPOSE: The design of turbo spin-echo sequences is modeled as a dynamic optimization problem which includes the case of inhomogeneous transmit radiofrequency fields. This problem is efficiently solved by optimal control techniques making it possible to design patient-specific sequences online. THEORY AND METHODS: The extended phase graph formalism is employed to model the signal evolution. The design problem is cast as an optimal control problem and an efficient numerical procedure for its solution is given. The numerical and experimental tests address standard multiecho sequences and pTx configurations. RESULTS: Standard, analytically derived flip angle trains are recovered by the numerical optimal control approach. New sequences are designed where constraints on radiofrequency total and peak power are included. In the case of parallel transmit application, the method is able to calculate the optimal echo train for two-dimensional and three-dimensional turbo spin echo sequences in the order of 10 s with a single central processing unit (CPU) implementation. The image contrast is maintained through the whole field of view despite inhomogeneities of the radiofrequency fields. CONCLUSION: The optimal control design sheds new light on the sequence design process and makes it possible to design sequences in an online, patient-specific fashion. Magn Reson Med 77:361-373, 2017. © 2016 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine.


Subject(s)
Imaging, Three-Dimensional/methods , Magnetic Resonance Imaging/methods , Algorithms , Brain/diagnostic imaging , Humans , Phantoms, Imaging , Signal Processing, Computer-Assisted
19.
J Cereb Blood Flow Metab ; 37(4): 1461-1469, 2017 Apr.
Article in English | MEDLINE | ID: mdl-27354092

ABSTRACT

Increasing the concentration of oxygen dissolved in water is known to increase the recovery rate (R1 = 1/T1) of longitudinal magnetization (T1 relaxation). Direct T1 changes in response to precise hyperoxic gas challenges have not yet been quantified and the actual effect of increasing arterial oxygen concentration on the T1 of brain parenchyma remains unclear. The aim of this work was to use quantitative T1 mapping to measure tissue T1 changes in response to precisely targeted hyperoxic respiratory challenges ranging from baseline end-tidal oxygen (PetO2) to approximately 500 mmHg. We did not observe measureable T1 changes in either gray matter or white matter parenchymal tissue. The T1 of peripheral cerebrospinal fluid located within the sulci, however, was reduced as a function of PetO2. No significant T1 changes were observed in the ventricular cerebrospinal fluid under hyperoxia. Our results indicate that care should be taken to distinguish actual T1 changes from those which may be related to partial volume effects with cerebrospinal fluid, or regions with increased fluid content such as edema when examining hyperoxia-induced changes in T1 using methods based on T1-weighted imaging.


Subject(s)
Brain Mapping/methods , Brain/diagnostic imaging , Hyperoxia , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Oxygen/metabolism , Adult , Brain/metabolism , Female , Healthy Volunteers , Humans , Hyperoxia/cerebrospinal fluid , Hyperoxia/metabolism , Male , Oxygen/administration & dosage , Oxygen Consumption , Reproducibility of Results , Sensitivity and Specificity , Tissue Distribution
20.
Magn Reson Med ; 77(5): 2040-2047, 2017 05.
Article in English | MEDLINE | ID: mdl-27173968

ABSTRACT

PURPOSE: Peak local specific absorption rate (pSAR10g) is an important parameter used to determine patient safety during radiofrequency transmission. pSAR10g predictions for parallel transmit MRI are affected by the level of coupling exhibited by a modeled array in the simulation environment. However, simulated array coupling is rarely equal to the physical array coupling. Accurately simulating the physical array coupling may improve the accuracy of predicted SAR levels. METHODS: The scattering parameter matrix (S-matrix) of a prototype 4-channel array was measured in situ using directional couplers installed on a 7T scanner. Agreement between the simulated and measured S-matrix was achieved by using network co-simulation with a modified cost function. B1+ maps acquired in a phantom were compared to B1+ distributions determined from simulations. RESULTS: The modified co-simulation technique forces the simulations to have S-matrices similar to the measured values. A comparison of realistically versus ideally simulated coupling conditions shows that ideally simulated coupling can result in large ( > 40%) error in pSAR10g predictions, even when the array is reasonably tuned. The simulated B1+ distributions match the measured B1+ distributions better when the coupling is accurately simulated. CONCLUSION: Considering the measured array coupling matrix in numerical simulations eliminates a potential confound in pSAR10g prediction. Magn Reson Med 77:2040-2047, 2017. © 2016 International Society for Magnetic Resonance in Medicine.


Subject(s)
Magnetic Resonance Imaging/methods , Algorithms , Computer Simulation , Equipment Design , Hot Temperature , Humans , Image Processing, Computer-Assisted , Models, Theoretical , Patient Safety , Phantoms, Imaging , Radio Waves , Reproducibility of Results , Scattering, Radiation
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