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1.
Plant Mol Biol ; 20(6): 1143-8, 1992 Dec.
Article in English | MEDLINE | ID: mdl-1463847

ABSTRACT

A full-length cDNA clone encoding carbonic anhydrase was isolated from an Arabidopsis thaliana (Columbia) leaf library. Comparison of the derived amino acid sequence obtained from this clone with those of pea and spinach reveals a considerable degree of identity. The carbonic anhydrase cDNA was used to probe the level of RNA encoding this protein in the leaves of plants grown in elevated CO2 (660 ppm). We have found that under these conditions the steady-state level of carbonic anhydrase mRNA was increased in comparison with control plants grown in normal atmospheric concentrations of CO2 (330 ppm). This raises the intriguing possibility that there exists in higher plants a mechanism for perceiving and responding to changes in environmental CO2 concentrations at the genetic level.


Subject(s)
Arabidopsis/genetics , Carbonic Anhydrases/genetics , Amino Acid Sequence , Arabidopsis/enzymology , Base Sequence , Carbon Dioxide/physiology , DNA/genetics , Gene Expression Regulation , Genes, Plant , Molecular Sequence Data , Plant Proteins/genetics , RNA, Messenger/genetics , Sequence Alignment
5.
J Med Virol ; 28(2): 73-7, 1989 Jun.
Article in English | MEDLINE | ID: mdl-2544679

ABSTRACT

We describe a novel method for the detection of human rhinoviruses in clinical samples, using the polymerase chain reaction. Two synthetic oligonucleotide primers were produced that bind in the 5' noncoding region of all rhinovirus serotypes tested, about 350 nucleotides apart, and were used to prime polymerase chain reaction amplification of the intervening stretch of DNA. The product of this reaction, which can be clearly visualized by gel electrophoresis, is a discrete 380 bp band, the occurrence of which is diagnostic of the presence of a rhinovirus in the clinical sample analysed. The technique, which is rapid, sensitive, and reliable, has been used successfully for all the different rhinovirus serotypes tested to date in our laboratory. However, the sensitivity of detection is greatly dependent on the inclusion of both tRNA and vanadyl complexes during the viral RNA extraction process. Using this technique, under optimal conditions, we were able to detect virus in clinical samples with titres as low as TCID50 10(2.5).


Subject(s)
DNA, Viral/biosynthesis , DNA-Directed DNA Polymerase , Gene Amplification , Picornaviridae Infections/genetics , Rhinovirus/isolation & purification , Base Sequence , Humans , Nucleic Acid Hybridization , Rhinovirus/classification , Rhinovirus/genetics , Sensitivity and Specificity , Serotyping
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