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2.
ACS Omega ; 7(28): 24614-24625, 2022 Jul 19.
Article in English | MEDLINE | ID: mdl-35874199

ABSTRACT

Paleocene-Eocene hyperthermal events are a current research focus in the fields of sedimentology and paleoclimatology. The Fushun Basin in northeast China contains continuous continental Eocene fine-grained rocks, and a series of Eocene hyperthermal events in the Fushun Basin have been identified. Because of the high cost of high-precision isotope data testing, it is necessary to find new and alternative paleoclimate parameters. In this study, Eocene coal and oil shale-bearing layers in the Fushun Basin are used as research objects. The high-precision data of magnetic susceptibility, color reflectance, rock composition, and cluster analyses are used to conduct a vertical comparison in the same category and compare that analysis with the identified Eocene hyperthermal events in the Fushun Basin. The preliminary results show that high-frequency-dependent susceptibility, high color reflectance a* (redness)/L* (lightness) values, and high kaolinite content in the study area have good correspondence with global hyperthermal events and can be used as effective parameters for the identification of continental basin hyperthermal events. The detailed magnetic susceptibility and color reflectance data also reveal that the Eocene strata in the Fushun Basin recorded the Late Lutetian Thermal Maximum (LLTM) and 13 short-term hyperthermal events during the Early Eocene Climatic Optimum (EECO). These results indicate that the parameters of rock physical properties can be used to study the evolution of the paleoclimate in geological history, and it has universal practicability in continental and marine fine-grained sedimentary rocks.

3.
PLoS One ; 14(11): e0225080, 2019.
Article in English | MEDLINE | ID: mdl-31726467

ABSTRACT

We performed a series of bioinformatics analysis on a set of important gene expression data with 76 samples in early stage of non-small cell lung cancer, including 40 adenocarcinoma samples, 16 squamous cell carcinoma samples and 20 normal samples. In order to identify the specific markers for diagnosis, we compared the two subtypes with the normal samples respectively to determine the gene expression characteristics. Through the multi-dimensional scaling classification, we found that the samples were clustered well according to the disease cases. Based on the classification results and using empirical Bayes moderation and treat method, 486 important genes associated with the disease were identified. We constructed gene functions and gene pathways to verify our result and explain the pathogenicity factor and process. We generated a protein-protein interaction network based on the mutual interaction between the selected genes and found that the top thirteen hub genes were highly associated with lung cancer or some other cancers including five newly found genes through our method. The results of this study indicated that contrast on the gene expression between different subtypes and normal samples provides important information for the detection of non-small cell lung cancer and helps exploration of the disease pathogenesis.


Subject(s)
Biomarkers, Tumor/metabolism , Carcinoma, Non-Small-Cell Lung/metabolism , Carcinoma, Non-Small-Cell Lung/pathology , Lung Neoplasms/metabolism , Lung Neoplasms/pathology , Bayes Theorem , Cell Line, Tumor , Cluster Analysis , Down-Regulation/genetics , Gene Expression Regulation, Neoplastic , Gene Ontology , Gene Regulatory Networks , Humans , Neoplasm Staging , Protein Interaction Maps , Up-Regulation/genetics
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