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1.
Adv Sci (Weinh) ; 11(14): e2308496, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38308190

ABSTRACT

During maternal-to-zygotic transition (MZT) in the embryo, mRNA undergoes complex post-transcriptional regulatory processes. However, it is unclear whether and how alternative splicing plays a functional role in MZT. By analyzing transcriptome changes in mouse and human early embryos, dynamic changes in alternative splicing during MZT are observed and a previously unnoticed process of zygotic splicing activation (ZSA) following embryonic transcriptional activation is described. As the underlying mechanism of RNA splicing, splicing factors undergo dramatic maternal-to-zygotic conversion. This conversion relies on the key maternal factors BTG4 and PABPN1L and is zygotic-transcription-dependent. CDK11-dependent phosphorylation of the key splicing factor, SF3B1, and its aggregation with SRSF2 in the subnuclear domains of 2-cell embryos are prerequisites for ZSA. Isoforms generated by erroneous splicing, such as full-length Dppa4, hinder normal embryonic development. Moreover, alternative splicing regulates the conversion of early embryonic blastomeres from totipotency to pluripotency, thereby affecting embryonic lineage differentiation. ZSA is an essential post-transcriptional process of MZT and has physiological significance in generating new life. In addition to transcriptional activation, appropriate expression of transcript isoforms is also necessary for preimplantation embryonic development.


Subject(s)
Transcriptome , Zygote , Humans , Animals , Mice , Transcriptome/genetics , Zygote/metabolism , Embryonic Development/genetics , RNA Splicing , Protein Isoforms/genetics , Poly(A)-Binding Proteins/genetics , Poly(A)-Binding Proteins/metabolism , Nuclear Proteins/genetics
2.
ACS Appl Mater Interfaces ; 15(31): 37214-37231, 2023 Aug 09.
Article in English | MEDLINE | ID: mdl-37498537

ABSTRACT

Currently, antibiotics are the most common treatment for bacterial infections in clinical practice. However, with the abuse of antibiotics and the emergence of drug-resistant bacteria, the use of antibiotics has faced an unprecedented challenge. It is imminent to develop nonantibiotic antimicrobial agents. Based on the cation-π structure of barnacle cement protein, a polyphosphazene-based polymer poly[(N,N-dimethylethylenediamine)-g-(N,N,N,N-dimethylaminoethyl p-ammonium bromide (ammonium bromide)-g-(N,N,N,N-dimethylaminoethyl acetate ethylammonium bromide)] (PZBA) with potential adhesion and inherent antibacterial properties was synthesized, and a series of injectable antibacterial adhesive hydrogels (PZBA-PVA) were prepared by cross-linking with poly(vinyl alcohol) (PVA). PZBA-PVA hydrogels showed good biocompatibility, and the antibacterial rate of the best-performed hydrogel reached 99.81 ± 0.04% and 98.80 ± 2.16% against Staphylococcus aureus and Escherichia coli within 0.5 h in vitro, respectively. In the infected wound model, the healing rate of the PZBA-PVA-treated group was significantly higher than that of the Tegaderm film group due to the fact that the hydrogel suppressed inflammatory responses and modulated the infiltration of immune cells. Moreover, the wound healing mechanism of the PZBA-PVA hydrogel was further evaluated by real-time polymerase chain reaction and total RNA sequencing. The results indicated that the process of hemostasis and tissue development was prompted and the inflammatory and immune responses were suppressed to accelerate wound healing. Overall, the PZBA-PVA hydrogel is shown to have the potential for infected wound healing application.


Subject(s)
Staphylococcal Infections , Tissue Adhesives , Humans , Hydrogels/pharmacology , Hydrogels/chemistry , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/chemistry
3.
Int J Mol Sci ; 23(24)2022 Dec 08.
Article in English | MEDLINE | ID: mdl-36555200

ABSTRACT

Pulmonary arterial hypertension (PAH) is a pulmonary vascular disease characterized by pulmonary vascular remodeling and right heart enlargement the pathogenesis of PAH is complicated; no biologic-based therapy is available for the treatment of PAH, but recent studies suggest that inflammatory response and abnormal proliferation of pulmonary artery smooth muscle cells are the main pathogenic mechanism, while the role of immune-related long non-coding RNAs (lncRNAs) remains unclear. The aim of this study was to systematically analyze immune-related lncRNAs in PAH. Here, we downloaded a publicly available microarray data from PAH and control patients (GSE113439). A total of 243 up-regulated and 203 down-regulated differentially expressed genes (DEGs) were screened, and immune-related DEGs were further obtained from ImmPort. The immune-related lncRNAs were obtained by co-expression analysis of immune-related mRNAs. Then, immune-related lncRNAs-mRNAs network including 2 lncRNAs and 6 mRNAs was constructed which share regulatory miRNAs and have significant correlation. Among the lncRNA-mRNA pairs, one pair (JPX-RABEP1) was verified in the validating dataset GSE53408 and PAH mouse model. Furthermore, the immune cell infiltration analysis of the GSE113439 dataset revealed that the JPX-RABEP1 pair may participate in the occurrence and development of PAH through immune cell infiltration. Together, our findings reveal that the lncRNA-mRNA pair JPX-RABEP1 may be a novel biomarker and therapeutic target for PAH.


Subject(s)
Pulmonary Arterial Hypertension , RNA, Long Noncoding , Animals , Mice , Pulmonary Arterial Hypertension/genetics , RNA, Long Noncoding/genetics , Familial Primary Pulmonary Hypertension , Biomarkers , Computational Biology , RNA, Messenger/genetics
4.
Sci Total Environ ; 818: 151685, 2022 Apr 20.
Article in English | MEDLINE | ID: mdl-34785231

ABSTRACT

The boom in the takeaway industry has significantly increased the consumption of disposable plastic materials, which are very likely to release microplastic particles and cause secondary risks during daily use. The objective of this study was to probe whether heat treatment of disposable plastic materials in water, mimicking their use for hot food or drink, could result in the release of particles and harmful substances in the leachate. Our results showed that a hot water (100 °C) soaking released 1.07 ± 0.507, 1.44 ± 0.147, 2.24 ± 0.719 and 1.57 ± 0.599 million submicron and microparticles/mL from plastic packaging, cups, transparent boxes and expandable boxes, respectively after 60 min of agitation, and the submicron fraction was dominant. Based on Fourier transform infrared spectroscopy, heat treatment also altered the chemical composition of polyethylene packaging, but it had minor effects on polypropylene cups, transparent boxes and polystyrene expandable boxes. In addition, organic chemicals and heavy metals (mainly As, Cr and Pb), with maximum concentrations of 2.1 ± 0.85 mgC/L and 4.2 ± 0.32 ng/L, were detected in the leachate from plastic packaging, cups and expandable boxes, indicating the potential risk of these materials while holding hot food or drink. The findings suggest the potential ingestion risk of microplastics and harmful substances by human beings during the daily use of disposable plastic materials.


Subject(s)
Metals, Heavy , Water Pollutants, Chemical , Environmental Monitoring , Humans , Microplastics , Plastics/chemistry , Water , Water Pollutants, Chemical/analysis
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