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1.
AMB Express ; 13(1): 80, 2023 Aug 01.
Article in English | MEDLINE | ID: mdl-37528261

ABSTRACT

Microorganisms play an important role in the tobacco aging process. Before the aging process, raw tobacco leaves must be threshed and redried. In order to explore the differences of microbial community structure of threshed and redried tobacco leaves from different origins at home and abroad, 14 groups of tobacco leaves from 8 different countries were tested by high-throughput DNA sequencing and microbiology analysis. Then, through amplicon sequence variants (ASV) cluster analysis, Venn diagram and species labeling and other microbial diversity analysis, the dominant bacteria and fungi on the surface of threshed and redried tobacco leaves were obtained. The results showed that there were significant differences in the composition of tobacco bacteria and fungi after threshing and redrying from different geographical areas. The relative abundance of Microbacterium and Sphingomonas in domestic tobacco leaves was significantly higher than that of foreign tobacco leaves. The relative abundance of Pseudomonas in foreign tobacco bacterial colonies was significantly higher than that of domestic tobacco leaves. In terms of fungi, the relative abundance of Aspergillus and Alternaria in domestic tobacco leaves was significantly higher than that of foreign tobacco leaves. Septoria, Sampaiozyma, Cladosporium and Phoma account for significantly higher proportions of foreign tobacco leaves. These microorganisms may be indispensable in aging process to form different flavors of tobacco leaves. It provides an important theoretical basis for the further use of microorganisms to promote tobacco leaf aging.

2.
Sci Rep ; 13(1): 13333, 2023 08 16.
Article in English | MEDLINE | ID: mdl-37587237

ABSTRACT

During the processing of tobacco leaves, flue-curing and redrying can affect the structure of bacterial community, having an effect on the aging quality of tobacco leaves. In order to characterize the effects of flue-curing and redrying on the bacterial community of tobacco leaves, the bacterial community of samples at different processing stages (before flue-curing, after flue-curing, before redrying and after redrying) was analyzed using Illumina sequencing. A total of 33 phyla, 79 classes, 195 orders, 344 families, 826 genera and 7922 ASVs were obtained from 36 samples. There was no significant difference in the core bacterial groups of tobacco leaf at four processing stages. Proteobacteria dominated at the phylum level. Sphingomonas, Pseudomonas and Methylobacterium were the main genera shared by all samples. The functional prediction by PICRUSt showed an increase in the relative abundance of pathway related to metabolism after flue-curing and pathway related to environmental information processing after redrying. This study, we analyzed the changes of bacterial community and structural composition of tobacco leaves from flue-curing to redrying, and found that flue-curing had a greater effect on the microbial community than redrying. This is conducive for the exploration of microbial resources and improvement of tobacco leaf quality.


Subject(s)
Cancer Vaccines , Nicotiana , Humans , Plant Leaves , Proteobacteria/genetics , Aging
3.
PLoS One ; 17(11): e0274968, 2022.
Article in English | MEDLINE | ID: mdl-36350806

ABSTRACT

Immersive projection display system is widely adopted in virtual reality and various exhibition halls. How to maintain high display quality in an immersive projection environment with uneven illumination and the color deviation caused by the inter-reflection of light is still a challenging task. In this paper, we innovatively propose a deep learning-based radiation compensation for an L-shaped projector-camera system. This method employs complex reflection phenomena to simulate the light transport processing in an L-shaped environment, we also designed a Dark-Channel Enhanced-Compensation Net (DECNet) which composed of a convolutional neural network called Compensation Net, a DarkChannelNet and another subnet (such as sensing network) aiming at achieving high-quality reproduction of projected display images. The final output of DECNet is the compensation image to be projected. It is always a critical problem to establish appropriate evaluation and analysis indexes throughout the research of light pollution compensation algorithms. In this paper, PSNR, SSIM, and RMSE are proposed to quantitatively analyze the image quality. The experimental results show that this method has certain advantages in reducing the inter-reflection of the projection plane. And our method could also well replace the traditional process using the backlight transmission matrix. It can be concluded to a certain that this method can be extended to other more complex projection environments with strong scalability and inclusiveness.


Subject(s)
Algorithms , Neural Networks, Computer , Image Processing, Computer-Assisted/methods
4.
Front Plant Sci ; 13: 998841, 2022.
Article in English | MEDLINE | ID: mdl-36247564

ABSTRACT

The pectin methylesterases (PMEs) play multiple roles in regulating plant development and responses to various stresses. In our study, a total of 121 PME genes were identified in the tobacco genome, which were clustered into two groups based on phylogenetic analysis together with Arabidopsis members. The investigations of gene structure and conserved motif indicated that exon/intron and motif organizations were relatively conserved in each group. Additionally, several stress-related elements were identified in the promoter region of these genes. The survey of duplication events revealed that segmental duplications were critical to the expansion of the PME gene family in tobacco. The expression profiles analysis revealed that these genes were expressed in various tissues and could be induced by diverse abiotic stresses. Notably, NtPME029 and NtPME043, were identified as homologues with AtPME3 and AtPME31, respectively. Furthermore, NtPME029 was highly expressed in roots and the over-expression of the NtPME029 gene could promote the development of roots. While NtPME043 could be induced by salt and ABA treatments, and the over-expression of the NtPME043 gene could significantly enhance the salt-stress tolerance in tobacco. Overall, these findings may shed light on the biological and functional characterization of NtPME genes in tobacco.

5.
Arch Virol ; 167(12): 2845-2850, 2022 Dec.
Article in English | MEDLINE | ID: mdl-36214899

ABSTRACT

Stagonosporopsis cucurbitacearum is an important plant-pathogenic fungus that causes stem and leaf blight diseases in a variety of crops. Here, we report the characterization of a novel victorivirus, tentatively named "Stagonosporopsis cucurbitacearum victorivirus 1" (ScVV-1), isolated from the S. cucurbitacearum isolate M-7. The ScVV-1 genome is 5,165 bp in length with a predicted GC content of 60.1% and contains two large open reading frames (ORF 1 and ORF2) encoding putative proteins that share significant sequence similarity with coat proteins (CPs) and RNA-dependent RNA polymerases (RdRps) of mycoviruses of the family Totiviridae. The ScVV-1 RdRp appears to be translated using a stop-initiation pentanucleotide UAAUG sequence. Phylogenetic analysis based on CP and RdRp amino acid (aa) sequences both indicated that ScVV-1 belongs to the genus Victorivirus in the family Totiviridae. To our knowledge, this is the first full-length genome sequence of a victorivirus infecting S. cucurbitacearum.


Subject(s)
Ascomycota , Fungal Viruses , Totiviridae , Nicotiana/genetics , Phylogeny , Totiviridae/genetics , Ascomycota/genetics , Fungal Viruses/genetics , Open Reading Frames , Genome, Viral , RNA, Viral/genetics , RNA, Viral/chemistry , RNA, Double-Stranded
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