Long-term performance of three mesophilic anaerobic digesters to convert animal and agro-industrial wastes into organic fertilizer.

Few studies have investigated the performance of anaerobic digestion (AD) to convert animal and agro-industrial wastes to organic fertilizers over a long-term field conditions. This paper studied three large-scale mesophilic digesters (D1eD3) over two years for their effects on feedstocks, which were dairy manure for D1 and D2 and co-digestion mixed manure and agro-industrial wastes for D3. Hydraulic retention times (HRT) were 9 d for D1, 12 d for D2, and 34 d for D3. Digester influent and effluent samples were taken every two months from the digesters and analyzed for pH, and concentrations of total solids (TS), ammonium nitrogen (NH4-N), total Kjeldahl nitrogen (TKN), total phosphorus (TP), and eight metals. The study revealed high variability in converting feedstock in the three digesters. Compared with their respective influent, the mean digester effluent pH decreased from 7.9 by 0.6 in D1 (p < 0.01) and by 0.3 in D2 (p < 0.01), but it increased from 6.1 by 1.8 in D3 (p < 0.01). The mean digester effluent TS increased from 3.4% by 0.1% (p > 0.05) in D1, but it decreased from 4.9% by 1.3% in D2 (p < 0.05) and from 12.3% by 4.8% in D3 (p < 0.01). All three digesters significantly increased NH4-N concentrations by 21.4 e81.8% (p < 0.05), but insignificantly changed TKN and TP concentrations (p > 0.05). Effects of AD on all metal concentrations were mixed and were insignificant (p > 0.05) because of large concentration variations. However, study of a ratio quotient (q Mg ) using magnesium (Mg) as the reference discovered accumulation of NH4-N, copper, potassium, and sodium, but loss of TKN, TP, iron, manganese, zinc, and calcium during AD for D2 and D3. The impact of AD conversion was closely related with types of feedstock (on pH) and HRT (on TS and NH4-N). The results of this study can assist in developing strategies for cleaner production using AD in an environmentally sustainable manner.

Deposition- and transport-dominated erosion regime effects on the loss of dissolved and sediment-bound organic carbon: Evaluation in a cultivated soil with laboratory rainfall simulations.

Erosion-induced soil carbon loss has been identified as a critical process in the global carbon (C) cycle. Surface coverage substantially alters the soil erosion process and the effects of net loss or deposition on soil organic C (SOC). However, information on SOC loss induced by soil erosion at the process level is limited. The aim of this study was to investigate how runoff and erosion regimes affect dissolved and sediment-bound organic C (DOC and SBOC) loss. Thus, six simulated rainfall events were conducted on two laboratory plots (9.75 m × 1.83 m) with different surface coverages (17-83%) and coverage distributions (upslope vs. downslope) using polypropylene geotextiles. The results showed that the variability in the process of runoff and sediment yield existed as a result of altered surface coverage over the erosion zone (SSerosion zone) and covered zone (SScovered zone) on the slope. Thus, the erosion regimes can be identified as deposition- and transport-dominated processes, which were the main soil erosion subprocesses. The surface coverage located downslope (SCtop-bottom slope) can more efficiently reduce runoff (21.9-85.7%) and sediment (67.6-98.3%) than the SCbottom-top slope (runoff: 20.1-83.0%; sediment: 35.0-93.3%), which has the surface coverage located upslope. DOC (8.0-11.3 mg L-1) and SBOC (0.3-0.5 mg g-1) in the deposition-dominated process on the SCtop-bottom slope were higher than in the transport-dominated process on the SCbottom-top slope (DOC: 6.8-10.2 mg L-1; SBOC: 0.2-0.3 mg g-1). The loading of DOC and SBOC was largely dependent on runoff and sediment yield, and DOC load contributed 83.9-89.7% of the SOC loss. Overall, laboratory results highlighted the soil C loss at different hydrological and erosion regimes (deposition- vs. transport-dominated process). This study provides important information that can be used to facilitate further implementations such as watershed modeling of soil C dynamics and the corresponding decision-making processes.

Effects of root morphological traits on soil detachment for ten herbaceous species in the Loess Plateau.

Plant root systems can greatly reduce soil loss, and their effects on soil erosion differ across species due to their varied root traits. The purpose of this study was to determine the effects of root morphology traits of herbaceous plants on the soil detachment process. Ten herbaceous plants (dominant species) in the Loess Plateau were selected, and 300 undisturbed soil samples (including living roots from the selected herbages) were scoured with flowing water to measure their soil detachment capacities under six levels of shear stress (4.98 to 16.37 Pa). Then, the root traits of each soil sample were measured, and the rill erodibility and critical shear stress were estimated based on the Water Erosion Prediction Project (WEPP) model. The results showed that root morphology traits varied greatly among the ten selected herbages. Accordingly, resulting variations in soil detachment capacity (0.030 to 3.297 kg m-2 s-1), rill erodibility (0.004 to 0.447 s m-1), and critical shear stress (4.73 to 1.13 Pa) were also observed. Plants with fibrous roots were more effective than those with tap roots in reducing soil detachment. Their mean soil detachment capacity and rill erodibility were 93.2% and 93.4% lower, respectively, and their mean critical shear stress was 1.15 times greater than that of the herbaceous plants with tap root systems. Of all the root traits, root surface area density (RSAD) was the primary root trait affecting the soil detachment, and it estimated the soil detachment capacity well (R2 = 0.91, normalized squared error (NSE) = 0.82). Additionally, an equation with few factors (soil aggregate and RSAD) was suggested to simulate the soil detachment capacity when the plant root parameters and soil properties were limited.

Author Correction: Multiple gene promoter methylation and clinical stage in adjacent normal tissues: Effect on prognosis of colorectal cancer in Taiwan.

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

Novel methylation gene panel in adjacent normal tissues predicts poor prognosis of colorectal cancer in Taiwan.

BACKGROUND: It is evident that current clinical criteria are suboptimal to accurately estimate patient prognosis. Studies have identified epigenetic aberrant changes as novel prognostic factors for colorectal cancer (CRC). AIM: To estimate whether a methylation gene panel in different clinical stages can reflect a different prognosis. METHODS: We enrolled 120 CRC patients from Tri-Service General Hospital in Taiwan and used the candidate gene approach to select six genes involved in carcinogenesis pathways. Patients were divided into two groups based on the methylation status of the six evaluated genes, namely, the < 3 aberrancy group and ≥ 3 aberrancy group. Various tumor stages were divided into two subgroups (local and advanced stages) on the basis of the pathological type of the following tissues: Tumor and adjacent normal tissues (matched normal). We assessed DNA methylation in tumors and adjacent normal tissues from CRC patients and analyzed the association between DNA methylation with different cancer stages and the prognostic outcome including time to progression (TTP) and overall survival. RESULTS: We observed a significantly increasing trend of hazard ratio as the number of hypermethylated genes increased both in normal tissue and tumor tissue. The 5-year TTP survival curves showed a significant difference between the ≥ 3 aberrancy group and the < 3 aberrancy group. Compared with the < 3 aberrancy group, a significantly shorter TTP was observed in the ≥ 3 aberrancy group. We further analyzed the interaction between CRC prognosis and different cancer stages (local and advanced) according to the methylation status of the selected genes in both types of tissues. There was a significantly shorter 5-year TTP for tumors at advanced stages with the promoter methylation status of selected genes than for those with local stages. We found an interaction between cancer stages and the promoter methylation status of selected genes in both types of tissues. CONCLUSION: Our data provide a significant association between the methylation markers in normal tissues with advanced stage and prognosis of CRC. We recommend using these novel markers to assist in clinical decision-making.

Multiple gene promoter methylation and clinical stage in adjacent normal tissues: Effect on prognosis of colorectal cancer in Taiwan.

This study provide an insight that the panel genes methylation status in different clinical stage tended to reflect a different prognosis even in matched normal tissues, to clinical recommendation. We enrolled 153 colorectal cancer patients from a medical center in Taiwan and used the candidate gene approach to select five genes involved in carcinogenesis pathways. We analyzed the relationship between DNA methylation with different cancer stages and the prognostic outcome. There were significant trends of increasing risk of 5-year time to progression and event-free survival of subjects with raising number of hypermethylation genes both in normal tissue and tumor tissue. The group with two or more genes with aberrant methylation in the advanced cancer stages (Me/advanced) had lower 5-year event-free survival among patients with colorectal cancer in either normal or tumor tissue. The adjusted hazard ratios in the group with two or more genes with aberrant methylation with advanced cancer stages (Me/advanced) were 8.04 (95% CI, 2.80-23.1; P for trend <0.01) and 8.01 (95% CI, 1.92-33.4; P for trend <0.01) in normal and tumor tissue, respectively. DNA methylation status was significantly associated with poor prognosis outcome. This finding in the matched normal tissues of colorectal cancer patients could be an alternative source of prognostic markers to assist clinical decision making.

Clinical stage and risk of recurrence and mortality: interaction of DNA methylation factors in patients with colorectal cancer.

Aberrant DNA methylation plays a crucial role in cancer development; however, prospective evidence of an interaction between molecular biomarkers and cancer staging for predicting the prognosis of colorectal cancer (CRC) is still limited. We examined DNA methylation in tumors and adjacent normal tissues from patients who underwent CRC surgical resection, and evaluated the interaction between cancer staging (advanced vs local) and DNA methylation to predict the prognosis of CRC. We recruited 132 patients with CRC from Tri-Service General Hospital in Taiwan and used the candidate gene approach to select 3 tumor suppressor genes involved in carcinogenesis pathways. ORs and 95% CIs were computed using logistic regression analyses while adjusting for potential covariates. Advanced cancer stage was correlated with cancer recurrence (OR 7.22, 95% CI 2.82 to 18.45; p<0.001). In addition, after stratification by promoter methylation in 3 combined genes in the matched normal tissues, we observed a joint effect after adjusting for sex, age at surgery, and adjuvant chemotherapy, yielding a significant OR of 20.35 (95% CI 4.16 to 99.57; p<0.001). DNA methylation status would significantly increase the recurrence risk of CRC with a significant impact on joint effect between DNA methylation and clinical stage, particularly in matched normal tissues. This was attributed to molecular changes that could not be examined on the basis of clinical pathology. Our interaction results may serve as a reference marker for evaluating the risk of recurrence in future studies.

Phosphorus losses from monitored fields with conservation practices in the Lake Erie Basin, USA.

Conservation practices are implemented on farm fields in the USA through Farm Bill programs; however, there is a need for greater verification that these practices provide environmental benefits (e.g., water quality). This study was conducted to assess the impact of Farm Bill eligible conservation practices on soluble P (SP) and total P (TP) losses from four fields that were monitored between 2004 and 2013. No-tillage doubled SP loading compared to rotational tillage (e.g., tilled only before planting corn); however, no-tillage decreased TP loading by 69 % compared to rotational tillage. Similarly, grassed waterways were shown to increase SP loads, but not TP loads. A corn-soybean-wheat-oat rotation reduced SP loads by 85 % and TP loads by 83 % compared to the standard corn-soybean rotation in the region. We can potentially attain TP water quality goals using these Farm Bill practices; however, additional strategies must be employed to meet these goals for SP.

Quantification of chemical transport processes from the soil to surface runoff.

There is a good conceptual understanding of the processes that govern chemical transport from the soil to surface runoff, but few studies have actually quantified these processes separately. Thus, we designed a laboratory flow cell and experimental procedures to quantify the chemical transport from soil to runoff water in the following individual processes: (i) convection with a vertical hydraulic gradient, (ii) convection via surface flow or the Bernoulli effect, (iii) diffusion, and (iv) soil loss. We applied different vertical hydraulic gradients by setting the flow cell to generate different seepage or drainage conditions. Our data confirmed the general form of the convection-diffusion equation. However, we now have additional quantitative data that describe the contribution of each individual chemical loading process in different surface runoff and soil hydrological conditions. The results of this study will be useful for enhancing our understanding of different geochemical processes in the surface soil mixing zone.

Determination of trace triazine and chloroacetamide herbicides in tile-fed drainage ditch water using solid-phase microextraction coupled with GC-MS.

Solid-phase microextraction coupled with gas chromatography-mass spectrometry (SPME-GC-MS) was used to analyze two triazine (atrazine and simazine) and three chloroacetamide herbicides (acetochlor, alachlor, and metolachlor) in water samples from a midwest US agricultural drainage ditch for two growing seasons. The effects of salt concentration, sample volume, extraction time, and injection time on extraction efficiency using a 100-mum polydimethylsiloxane-coated fiber were investigated. By optimizing these parameters, ditch water detection limits of 0.5 microgL(-1) simazine and 0.25 microgL(-1) atrazine, acetochlor, alachlor, and metolachlor were achieved. The optimum salt concentration was found to be 83% NaCl, while sample volume (10 or 20 mL) negligibly affected analyte peak areas. The optimum extraction time was 40 min, and the optimum injection time was 15 min. Results indicated that atrazine levels in the ditch water exceeded the US maximum contaminant level for drinking water 12% of the time, and atrazine was the most frequently detected among studied analytes.

Effects of near-surface hydraulic gradients on nitrate and phosphorus losses in surface runoff.

Phosphorous (P) and nitrogen (N) in runoff from agricultural fields are key components of nonpoint-source pollution and can accelerate eutrophication of surface waters. A laboratory study was designed to evaluate effects of near-surface hydraulic gradients on P and N losses in surface runoff from soil pans at 5% slope under simulated rainfall. Experimental treatments included three rates of fertilizer input (control [no fertilizer input], low [40 kg P ha(-1), 100 kg N ha(-1)], and high [80 kg P ha(-1), 200 kg N ha(-1)]) and four near-surface hydraulic gradients (free drainage [FD], saturation [Sa], artesian seepage without rain [Sp], and artesian seepage with rain [Sp + R]). Simulated rainfall of 50 mm h(-1) was applied for 90 min. The results showed that near-surface hydraulic gradients have dramatic effects on NO(3)-N and PO(4)-P losses and runoff water quality. Under the low fertilizer treatment, the average concentrations in surface runoff from FD, Sa, Sp, and Sp + R were 0.08, 2.20, 529.5, and 71.8 mg L(-1) for NO(3)-N and 0.11, 0.54, 0.91, and 0.72 mg L(-1) for PO(4)-P, respectively. Similar trends were observed for the concentrations of NO(3)-N and PO(4)-P under the high fertilizer treatment. The total NO(3)-N loss under the FD treatment was only 0.01% of the applied nitrogen, while under the Sp and Sp + R treatments, the total NO(3)-N loss was 11 to 16% of the applied nitrogen. These results show that artesian seepage could make a significant contribution to water quality problems.