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1.
Annu Int Conf IEEE Eng Med Biol Soc ; 2021: 3353-3357, 2021 11.
Article in English | MEDLINE | ID: mdl-34891958

ABSTRACT

Small rodent cardiac magnetic resonance imaging (MRI) plays an important role in preclinical models of cardiac disease. Accurate myocardial boundaries delineation is crucial to most morphological and functional analysis in rodent cardiac MRIs. However, rodent cardiac MRIs, due to animal's small cardiac volume and high heart rate, are usually acquired with sub-optimal resolution and low signal-to-noise ratio (SNR). These rodent cardiac MRIs can also suffer from signal loss due to the intra-voxel dephasing. These factors make automatic myocardial segmentation challenging. Manual contouring could be applied to label myocardial boundaries but it is usually laborious, time consuming, and not systematically objective. In this study, we present a deep learning approach based on 3D attention M-net to perform automatic segmentation of left ventricular myocardium. In the deep learning architecture, we use dual spatial-channel attention gates between encoder and decoder along with multi-scale feature fusion path after decoder. Attention gates enable networks to focus on relevant spatial information and channel features to improve segmentation performance. A distance derived loss term, besides general dice loss and binary cross entropy loss, was also introduced to our hybrid loss functions to refine segmentation contours. The proposed model outperforms other generic models, like U-Net and FCN, in major segmentation metrics including the dice score (0.9072), Jaccard index (0.8307) and Hausdorff distance (3.1754 pixels), which are comparable to the results achieved by state-of-the-art models on human cardiac ACDC17 datasets.Clinical relevance Small rodent cardiac MRI is routinely used to probe the effect of individual genes or groups of genes on the etiology of a large number of cardiovascular diseases. An automatic myocardium segmentation algorithm specifically designed for these data can enhance accuracy and reproducibility of cardiac structure and function analysis.


Subject(s)
Heart Ventricles , Magnetic Resonance Imaging , Animals , Attention , Heart Ventricles/diagnostic imaging , Mice , Myocardium , Reproducibility of Results
2.
Zhongguo Yi Liao Qi Xie Za Zhi ; 43(2): 79-82, 2019 Mar 30.
Article in Chinese | MEDLINE | ID: mdl-30977599

ABSTRACT

Restless legs syndrome,as a common sleep disorder,has nowadays long been diagnosed by self-rating scale and polysomnography.In this paper,a domestic diagnosis system for early restless legs syndrome based on deep learning is proposed,which is suitable for early patients with unstable symptoms in routine diagnosis.The hardware system is installed in the bed.And the non-contact sleeping dynamic signal acquisition is realized based on the acceleration sensors.The software system uses deep learning to classify and recognize the signals.A Fully Connected Feedforward Network based on Keras framework is constructed to recognize seven kinds of activities during sleeping.The accuracy of comprehensive classification is 97.83%.Based on former results,the periodic limb movement index and awakening index were evaluated to make the diagnosis of restless legs syndrome.


Subject(s)
Deep Learning , Polysomnography , Restless Legs Syndrome , Humans , Movement , Restless Legs Syndrome/diagnosis , Sleep
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