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1.
J Biol Chem ; 285(25): 19391-401, 2010 Jun 18.
Article in English | MEDLINE | ID: mdl-20410308

ABSTRACT

The PQBP1 (polyglutamine tract-binding protein 1) gene encodes a nuclear protein that regulates pre-mRNA splicing and transcription. Mutations in the PQBP1 gene were reported in several X chromosome-linked mental retardation disorders including Golabi-Ito-Hall syndrome. The missense mutation that causes this syndrome is unique among other PQBP1 mutations reported to date because it maps within a functional domain of PQBP1, known as the WW domain. The mutation substitutes tyrosine 65 with cysteine and is located within the conserved core of aromatic amino acids of the domain. We show here that the binding property of the Y65C-mutated WW domain and the full-length mutant protein toward its cognate proline-rich ligands was diminished. Furthermore, in Golabi-Ito-Hall-derived lymphoblasts we showed that the complex between PQBP1-Y65C and WBP11 (WW domain-binding protein 11) splicing factor was compromised. In these cells a substantial decrease in pre-mRNA splicing efficiency was detected. Our study points to the critical role of the WW domain in the function of the PQBP1 protein and provides an insight into the molecular mechanism that underlies the X chromosome-linked mental retardation entities classified globally as Renpenning syndrome.


Subject(s)
Carrier Proteins/chemistry , Carrier Proteins/genetics , Mutation, Missense , Nuclear Proteins/chemistry , Nuclear Proteins/genetics , Alternative Splicing , Calorimetry/methods , Circular Dichroism , DNA-Binding Proteins , Humans , Intellectual Disability/genetics , Ligands , Lymphocytes/metabolism , Magnetic Resonance Spectroscopy , Mutation , Proline/chemistry , Protein Structure, Tertiary , Surface Plasmon Resonance , Transcription, Genetic
2.
Dev Biol ; 323(1): 31-40, 2008 Nov 01.
Article in English | MEDLINE | ID: mdl-18755178

ABSTRACT

Gpr161 (also known as RE2) is an orphan G protein-coupled receptor (GPCR) that is expressed during embryonic development in zebrafish. Determining its biological function has proven difficult due to lack of knowledge regarding its natural or synthetic ligands. Here, we show that targeted knockdown of gpr161 disrupts asymmetric gene expression in the lateral plate mesoderm, resulting in aberrant looping of the heart tube. This is associated with elevated Ca(2+) levels in cells lining the Kupffer's vesicle and normalization of Ca(2+) levels, by over-expression of ncx1 or pmca-RNA, is able to partially rescue the cardiac looping defect in gpr161 knockdown embryos. Taken together, these data support a model in which gpr161 plays an essential role in left-right (L-R) patterning by modulating Ca(2+) levels in the cells surrounding the Kupffer's vesicle.


Subject(s)
Body Patterning/physiology , Receptors, G-Protein-Coupled/physiology , Zebrafish Proteins/physiology , Amino Acid Sequence , Animals , Animals, Genetically Modified , Body Patterning/genetics , Calcium/metabolism , Calcium Signaling , Embryo, Nonmammalian/metabolism , Embryo, Nonmammalian/physiology , Gene Expression Regulation, Developmental , In Situ Hybridization , Models, Biological , Molecular Sequence Data , Oligonucleotides, Antisense/pharmacology , Protein Structure, Tertiary , Receptors, G-Protein-Coupled/genetics , Receptors, G-Protein-Coupled/metabolism , Sequence Homology, Amino Acid , Zebrafish/embryology , Zebrafish/genetics , Zebrafish/metabolism , Zebrafish Proteins/antagonists & inhibitors , Zebrafish Proteins/genetics , Zebrafish Proteins/metabolism
3.
Gene Expr Patterns ; 7(5): 574-83, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17306630

ABSTRACT

Here, we report the identification and expression analysis of the zebrafish G protein gammaT1 subunit gene (gngT1) during development. Similar to its human and mouse homologs, we confirm zebrafish gngT1 is expressed in the developing retina, where its transcription overlaps with the photoreceptor cell-specific marker, rhodopsin (rho). Surprisingly, we also show zebrafish gngT1 is expressed in the dorsal diencephalon, where its transcription overlaps with the pineal specific markers, arylalkylamine N-acetyltransferase-2 (annat-2) and extra-ocular rhodopsin (exorh). Analysis of the proximal promoter sequence of the zebrafish gngT1 gene identifies several conserved binding sites for the cone-rod homeobox/orthodenticle (Crx/Otx) homeodomain family of transcription factors. Using a morpholino anti-sense approach in zebrafish, we show that targeted knockdown of otx5 potently suppresses gngT1 expression in the pineal gland, whereas knockdown of crx markedly reduces gngT1 expression in the retina. Taken together, these data indicate that pineal- and retinal-specific expression of the gngT1 gene are controlled by different transcription factors and exogenous signals.


Subject(s)
GTP-Binding Protein gamma Subunits/metabolism , Gene Expression Regulation, Developmental , Zebrafish Proteins/metabolism , Zebrafish/genetics , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , GTP-Binding Protein gamma Subunits/genetics , Homeodomain Proteins/genetics , Homeodomain Proteins/metabolism , In Situ Hybridization , Molecular Sequence Data , Oligonucleotides, Antisense/pharmacology , Otx Transcription Factors/genetics , Otx Transcription Factors/metabolism , Photoreceptor Cells/metabolism , Pineal Gland/cytology , Pineal Gland/metabolism , RNA Probes , Retina/cytology , Retina/metabolism , Rhodopsin/metabolism , Sequence Homology, Amino Acid , Trans-Activators/genetics , Trans-Activators/metabolism , Zebrafish/growth & development , Zebrafish/metabolism , Zebrafish Proteins/genetics
4.
Blood ; 108(1): 160-6, 2006 Jul 01.
Article in English | MEDLINE | ID: mdl-16537812

ABSTRACT

Vascular endothelial growth factor (VEGF) is a major mediator of pathologic angiogenesis, a process necessary for the formation of new blood vessels to support tumor growth. Historically, VEGF has been thought to signal via receptor tyrosine kinases, which are not typically considered to be G protein dependent. Here, we show that targeted knockdown of the G protein gng2 gene (Ggamma2) blocks the normal angiogenic process in developing zebrafish embryos. Moreover, loss of gng2 function inhibits the ability of VEGF to promote the angiogenic sprouting of blood vessels by attenuating VEGF induced phosphorylation of phospholipase C-gamma1 (PLCgamma1) and serine/threonine kinase (AKT). Collectively, these results demonstrate a novel interaction between Ggamma2- and VEGF-dependent pathways to regulate the angiogenic process in a whole-animal model. Blocking VEGF function using a humanized anti-VEGF antibody has emerged as a promising treatment for colorectal, non-small lung cell, and breast cancers. However, this treatment may cause considerable side effects. Our findings provide a new opportunity for cotargeting G protein- and VEGF-dependent pathways to synergistically block pathologic angiogenesis, which may lead to a safer and more efficacious therapeutic regimen to fight cancer.


Subject(s)
GTP-Binding Protein gamma Subunits/pharmacology , GTP-Binding Proteins/pharmacology , Neovascularization, Physiologic/drug effects , Protein Subunits/pharmacology , Signal Transduction/drug effects , Vascular Endothelial Growth Factor A/drug effects , Zebrafish Proteins/pharmacology , Animals , GTP-Binding Protein gamma Subunits/genetics , GTP-Binding Protein gamma Subunits/physiology , GTP-Binding Proteins/genetics , GTP-Binding Proteins/physiology , Gene Expression Profiling , Models, Animal , Neovascularization, Physiologic/physiology , Phenotype , Phospholipase C gamma/metabolism , Protein Subunits/genetics , Protein Subunits/physiology , Proto-Oncogene Proteins c-akt/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction/physiology , Vascular Endothelial Growth Factor A/physiology , Zebrafish , Zebrafish Proteins/genetics , Zebrafish Proteins/physiology
5.
Science ; 310(5755): 1782-6, 2005 Dec 16.
Article in English | MEDLINE | ID: mdl-16357253

ABSTRACT

Lighter variations of pigmentation in humans are associated with diminished number, size, and density of melanosomes, the pigmented organelles of melanocytes. Here we show that zebrafish golden mutants share these melanosomal changes and that golden encodes a putative cation exchanger slc24a5 (nckx5) that localizes to an intracellular membrane, likely the melanosome or its precursor. The human ortholog is highly similar in sequence and functional in zebrafish. The evolutionarily conserved ancestral allele of a human coding polymorphism predominates in African and East Asian populations. In contrast, the variant allele is nearly fixed in European populations, is associated with a substantial reduction in regional heterozygosity, and correlates with lighter skin pigmentation in admixed populations, suggesting a key role for the SLC24A5 gene in human pigmentation.


Subject(s)
Antiporters/genetics , Skin Pigmentation/genetics , Zebrafish Proteins/genetics , Zebrafish/genetics , Black or African American/genetics , Alanine/genetics , Alleles , Amino Acid Sequence , Animals , Antiporters/chemistry , Antiporters/physiology , Asian People/genetics , Biological Evolution , Black People/genetics , Calcium/metabolism , Gene Frequency , Genes , Genetic Variation , Haplotypes , Heterozygote , Humans , Ion Transport , Melanins/analysis , Melanosomes/chemistry , Melanosomes/ultrastructure , Mice , Molecular Sequence Data , Multifactorial Inheritance , Mutation , Pigment Epithelium of Eye/chemistry , Pigment Epithelium of Eye/ultrastructure , Polymorphism, Single Nucleotide , Selection, Genetic , Threonine/genetics , White People/genetics , Zebrafish/embryology , Zebrafish/metabolism , Zebrafish Proteins/chemistry , Zebrafish Proteins/physiology
6.
IUBMB Life ; 57(12): 773-8, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16393779

ABSTRACT

WW domains are small protein modules that recognize proline-rich peptide motifs or phosphorylated-serine/threonine proline sites in cognate proteins. Within host proteins these modules are joined to other protein domains or to a variety of catalytic domains acting together as adaptors or targeting anchors of enzymes. An important aspect of signaling by WW domains is their ability to recognize their cognate ligands in tandem. Tandem WW domains not only act in a synergistic manner but also appear to chaperone the function of each other. In this review, we focus on structure, function, and mechanism of the tandem WW domains co-operativity as well as independent actions. We emphasize here the implications of tandem arrangement and cooperative function of the domains for signaling pathways.


Subject(s)
Models, Molecular , Protein Structure, Tertiary/genetics , Proteins/chemistry , Signal Transduction/genetics , Adaptor Proteins, Signal Transducing/metabolism , ErbB Receptors/metabolism , Oxidoreductases/metabolism , Phosphoproteins/metabolism , Proline/metabolism , Protein Binding , Receptor, ErbB-4 , Transcription Factors , Tryptophan/chemistry , Tumor Suppressor Proteins , WW Domain-Containing Oxidoreductase , YAP-Signaling Proteins
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