Nanoscopic Dynamics Dictate the Phase Separation Behavior of Intrinsically Disordered Proteins.

Many intrinsically disordered proteins (IDPs) in nature may undergo liquid-liquid phase separation to assemble membraneless organelles with varied liquid-like properties and stability/dynamics. While solubility changes underlie these properties, little is known about hydration dynamics in phase-separating IDPs. Here, by studying IDP polymers of similar composition but distinct liquid-like dynamics and stability upon separation, namely, thermal hysteresis, we probe at a nanoscopic level hydration/dehydration dynamics in IDPs as they reversibly switch between phase separation states. Using continuous-wave electron paramagnetic resonance (CW EPR) spectroscopy, we observe distinct backbone and amino acid side-chain hydration dynamics in these IDPs. This nanoscopic view reveals that side-chain rehydration creates a dynamic water shield around the main-chain backbone that effectively and counterintuitively prevents water penetration and governs IDP solubility. We find that the strength of this superficial water shell is a sequence feature of IDPs that encodes for the stability of their phase-separated assemblies. Our findings expose and offer an initial understanding of how the complexity of nanoscopic water-IDP interactions dictate their rich phase separation behavior.

Characterization of Aqueous Lower-Polarity Solvation Shells Around Amphiphilic 2,2,6,6-Tetramethylpiperidine-1-oxyl Radicals in Water.

Solvation of the amphiphilic nitroxide radical 2,2,6,6-tetramethylpiperidine-1-oxyl (TEMPO) and hydrophilic 4-oxo-2,2,6,6-tetramethylpiperidine-1-oxyl (TEMPONE) in water and tetrahydrofuran (THF) is studied in detail. The existence of pure water shells enclosing TEMPO in an aqueous solution that leads to significantly reduced local polarity at the nitroxide moiety is shown with multifrequency electron paramagnetic resonance (EPR) spectroscopy at X- and Q-bands as well as spectral simulations. These aqueous lower-polarity solvation shells (ALPSS) offer TEMPO a local polarity that is similar to that in organic solvents like THF. Furthermore, using double electron-electron resonance spectroscopy, local enrichment and inhomogeneous distribution without direct molecular encounters of dissolved TEMPO in water are found that can be correlated with potentially attractive interactions mediated through ALPSS. However, no local enrichment of TEMPO is found in organic solvents such as THF. In contrast to TEMPO, the structurally very similar nitroxide radical TEMPONE shows no ALPSS encapsulation behavior with water molecules in aqueous solutions. Ensemble-averaging methods such as dynamic light scattering and electrospray ionization mass spectrometry substantiate the EPR spectroscopically obtained results of ALPSS-encased TEMPO and attractive interactions between them, leading to a higher local concentration. Furthermore, force field molecular dynamics simulations and metadynamics deliver support for our conclusions.

Nanoscopic hydrophilic/hydrophilic phase-separation well below the LCST of polyphosphoesters.

The complex phase separation process of thermoresponsive polyphosphoesters (PPEs) with an identical side-group structure but different copolymer compositions is characterized by electron paramagnetic resonance (EPR) spectroscopy. In water these PPEs show LCST-type behavior, in which water-rich and slightly polymer-enriched nanoscopic regions are highly water swollen, and nanoscopic inhomogeneities with the lowest polarity contrast measured so far develop 8 °C below the macroscopic cloud point.