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1.
Science ; : eadp4963, 2024 Jun 13.
Article in English | MEDLINE | ID: mdl-38870274

ABSTRACT

Nitrenes are a highly reactive, yet fundamental compound class. They possess a mono-valent nitrogen atom and usually a short life span, typically in the nanosecond range. Here, we report on the synthesis of a stable nitrene by photolysis of the arylazide MSFluindN3 (1), which gave rise to the quantitative formation of the arylnitrene MSFluindN (2) (MSFluind = dispiro[fluorene-9,3'-(1',1',7',7'-tetramethyl-s-hydrindacen-4'-yl)-5',9''-fluorene]), that remains unchanged for at least 3 days when stored under argon atmosphere at room temperature. The extraordinary life span permitted the full characterization of 2 by single crystal x-ray crystallography, EPR spectroscopy and SQUID magnetometry, which supported a triplet ground state. Theoretical simulations suggest in addition to the kinetic stabilization conferred by the bulky MSFluind aryl substituent, that electron delocalization across the central aromatic ring contributes to the electron stabilization of 2.

2.
Acta Crystallogr B Struct Sci Cryst Eng Mater ; 80(Pt 1): 13-18, 2024 Feb 01.
Article in English | MEDLINE | ID: mdl-38174727

ABSTRACT

The interaction of intense synchrotron radiation with molecular crystals frequently modifies the crystal structure by breaking bonds, producing fragments and, hence, inducing disorder. Here, a second-rank tensor of radiation-induced lattice strain is proposed to characterize the structural susceptibility to radiation. Quantitative estimates are derived using a linear response approximation from experimental data collected on three materials Hg(NO3)2(PPh3)2, Hg(CN)2(PPh3)2 and BiPh3 [PPh3 = triphenylphosphine, P(C6H5)3; Ph = phenyl, C6H5], and are compared with the corresponding thermal expansivities. The associated eigenvalues and eigenvectors show that the two tensors are not the same and therefore probe truly different structural responses. The tensor of radiative expansion serves as a measure of the susceptibility of crystal structures to radiation damage.

3.
Dalton Trans ; 52(44): 16235-16248, 2023 Nov 14.
Article in English | MEDLINE | ID: mdl-37853810

ABSTRACT

A set of N-coordinated tellurium(II) compounds containing either C,N-chelating ligands CNR (where CN = 2-(RNCH)C6H4, R = tBu or Dipp; Dipp = 2,6-iPr2C6H3) or N,C,N pincer ligands NCNR (where NCN = 2,6-(RNCH)2C6H4, R = tBu or Dipp) were synthesized. In the case of C,N-chelated compounds, the reaction of CNDippLi with Te(dtc)2 (where dtc = Et2NCS2) in a 1 : 1 molar ratio smoothly provided the carbamate CNDippTe(dtc) which upon treatment with 2 eq. of HCl provided the chloride CNDippTeCl. In contrast, the analogous conversion of NCNRLi with Te(dtc)2 surprisingly furnished ionic bromides [NCNRTe]Br as a result of the exchange of dtc by Br coming from nBuBr present in the reaction mixture. Furthermore, the reaction of CNDippTeCl or [NCNRTe]Br with silver salts AgX (X = OTf or SbF6) provided the expected tellurenium cations [CNDippTe]SbF6 and [NCNRTe]X. To further increase the Lewis acidity of the central atom, the oxidation of selected compounds with 1 eq. of SO2Cl2 was examined yielding stable compounds [CNtBuTeCl2]X and [NCNtBuTeCl2]X. The oxidation of the Dipp substituted compounds proved to be more challenging and an excess of SO2Cl2 was necessary to obtain the oxidized products [CNDippTeCl2]SbF6 and [NCNDippTeCl2]SbF6, which could solely be characterized in solution. Compounds [CNtBuTeCl2]OTf and [NCNtBuTeCl2]OTf were shown to undergo a controlled hydrolysis to the corresponding telluroxanes. All compounds were studied by multinuclear NMR spectroscopy in solution and for selected compounds solid state 125Te NMR spectroscopy and single-crystal X-ray diffraction analysis were performed. The Lewis acidity of the studied cations was examined by the Gutmann-Beckett method using Et3PO as the probing agent. The Te-N chalcogen bonding situation of selected compounds has also been examined computationally by a set of real-space bonding indicators.

4.
J Chem Phys ; 158(12): 124103, 2023 Mar 28.
Article in English | MEDLINE | ID: mdl-37003723

ABSTRACT

In X-ray constrained wavefunction (XCW) fitting, external information, such as electron correlation and polarization, is included into a single-determinantal isolated-molecule wavefunction. In a first step, we show that the extraction of these two physical effects by XCW fitting is complete and accurate by comparing to theoretical reference calculations. In a second step, we show that fitting to data from single-crystal x-ray diffraction measurements provides the same results qualitatively and how the physical effects can be separated, although always inherently convolved in the experiment. We further demonstrate that exchange-correlation potentials are systematically affected by XCW fitting in a physically meaningful way, which could be exploited for method development in quantum chemistry, subject to some remaining challenges that we also outline.

5.
Dalton Trans ; 52(18): 5918-5925, 2023 May 09.
Article in English | MEDLINE | ID: mdl-37067202

ABSTRACT

The perfluorinated alkoxy silanes {(F3C)3CO}3SiH (1) and {(F5C6)3CO}2Si(Cl)H (2) were prepared and fully characterized. Despite the high calculated Brønsted acidities, all attempts to deprotonate 1 and 2 to give the conjugate silanide ions failed due to the exceptionally short and strong Si-H bonds. In the solid state, the Si-H units are not involved in any intermolecular interactions, but instead the crystal packing consists of exceptionally short and strong F⋯F interactions. The cohesive energies are entirely comprised of London dispersion interactions, similarly as in the crystal structures of noble gases.

6.
Chem Commun (Camb) ; 59(20): 2903-2906, 2023 Mar 07.
Article in English | MEDLINE | ID: mdl-36752173

ABSTRACT

An organometallic tetrahedron-shaped indium(I) tetramer [(MeIPrCH)In]4 (MeIPrCH = [(MeCNDipp)2CCH]-; Dipp = 2,6-iPr2C6H3) supported by anionic N-heterocyclic olefin (aNHO) ligands is reported. The monomeric unit of this species exhibits both Lewis acidic and basic character at indium, while the steric profile of the aNHO ligand enables isolation of a rare monomeric imide, RInNR'.

7.
Chemphyschem ; 24(9): e202200876, 2023 May 02.
Article in English | MEDLINE | ID: mdl-36661050

ABSTRACT

2,1,3-Benzochalcogenadiazoles C6 R4 N2 E (E/R; E=S, Se, Te; R=H, F, Cl, Br, I) and C6 H2 R2 N2 E (E/R'; E=S, Se, Te; R=Br, I) are 10π-electron hetarenes. By CV/EPR measurements, DFT calculations, and QTAIM and ELI-D analyses, it is shown that their molecular electron affinities (EAs) increase with decreasing Allen electronegativities and electron affinities of the E and non-hydrogen R (except Cl) atoms. DFT calculations for E/R+e⋅- →[E/R]⋅- electron capture reveal negative ΔG values numerically increasing with increasing atomic numbers of the E and R atoms; positive ΔS has a minor influence. It is suggested that the EA increase is caused by more effective charge/spin delocalization in the radical anions of heavier derivatives due to contributions from diffuse (a real-space expanded) p-AOs of the heavier E and R atoms; and that this counterintuitive effect might be of the general character.

8.
Inorg Chem ; 61(22): 8406-8418, 2022 Jun 06.
Article in English | MEDLINE | ID: mdl-35609007

ABSTRACT

A PP(O)P pincer ligand based upon a peri-substituted acenaphthyl (Ace) scaffold and a secondary phosphine oxide, (5-Ph2P-Ace-6-)2P(O)H, was prepared and fully characterized including a neutron diffraction study. The reaction with [Ni(H2O)6]Cl2 and PdCl2 produced ionic metal(II) complexes [κ3-P,P',P''((5-Ph2P-Ace-6-)2P(OH))MCl]Cl, which upon addition of Et3N gave rise to zwitterionic metal(II) complexes κ3-P,P',P''((5-Ph2P-Ace-6-)2P(O))MCl (M = Ni, Pd). The reaction with Ni(COD)2 (COD = cyclooctadiene) provided the η3-cyclooctenyl Ni(II) complex κ3-P,P',P''((5-Ph2P-Ace-6-)2P(O))Ni(η3-C8H13). A detailed complementary bonding analysis of the P-H, P-O, and P-M interactions was carried out (M = Ni, Pd).

9.
Chemistry ; 28(45): e202201023, 2022 Aug 10.
Article in English | MEDLINE | ID: mdl-35587690

ABSTRACT

The majority of binary chalcogen fluorides are fiercely reactive and extremely difficult to handle. Here, we show that access to crystalline donor-acceptor complexes between chalcogen difluorides (sulfur, selenium) and tetrafluorides (selenium, tellurium) with the N-heterocyclic carbene (NHC) 1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene (IPr) is possible conveniently and safely without the need to generate the highly unstable EF2 (E=S, Se) or the very toxic and corrosive SeF4 .

10.
Chemistry ; 27(64): 15898-15902, 2021 Nov 17.
Article in English | MEDLINE | ID: mdl-34550614

ABSTRACT

The Brønsted acidity of the perfluorinated trialkoxysilanol {(F3 C)3 CO}3 SiOH is more than 13 orders of magnitude higher than that of orthosilicic acid, Si(OH)4 , and even more for most previously known silanols. It is easily deprotonated by simple amines and pyridines to give the conjugate silanolates [OSi{OC(CF3 )3 }3 ]- , which possess extremely short Si-O bonds, comparable to those of silanones.

11.
Chemistry ; 27(10): 3407-3419, 2021 Feb 15.
Article in English | MEDLINE | ID: mdl-33090581

ABSTRACT

The crystal interaction density is generally assumed to be a suitable measure of the polarization of a low-molecular weight ligand inside an enzyme, but this approximation has seldomly been tested and has never been quantified before. In this study, we compare the crystal interaction density and the interaction electrostatic potential for a model compound of loxistatin acid (E64c) with those inside cathepsin B, in solution, and in vacuum. We apply QM/MM calculations and experimental quantum crystallography to show that the crystal interaction density is indeed very similar to the enzyme interaction density. Less than 0.1 e are shifted between these two environments in total. However, this difference has non-negligible consequences for derived properties.


Subject(s)
Electrons , Ligands , Pharmaceutical Preparations , Static Electricity
12.
IUCrJ ; 7(Pt 2): 268-275, 2020 Mar 01.
Article in English | MEDLINE | ID: mdl-32148854

ABSTRACT

Efficient infiltration of a mesoporous titania matrix with conducting organic polymers or small molecules is one key challenge to overcome for hybrid photovoltaic devices. A quantitative analysis of the backfilling efficiency with time-of-flight grazing incidence small-angle neutron scattering (ToF-GISANS) and scanning electron microscopy (SEM) measurements is presented. Differences in the morphology due to the backfilling of mesoporous titania thin films are compared for the macromolecule poly[4,8-bis-(5-(2-ethyl-hexyl)-thio-phen-2-yl)benzo[1,2-b;4,5-b']di-thio-phene-2,6-diyl-alt-(4-(2-ethyl-hexyl)-3-fluoro-thieno[3,4-b]thio-phene-)-2-carboxyl-ate-2-6-diyl)] (PTB7-Th) and the heavy-element containing small molecule 2-pinacol-boronate-3-phenyl-phen-anthro[9,10-b]telluro-phene (PhenTe-BPinPh). Hence, a 1.7 times higher backfilling efficiency of almost 70% is achieved for the small molecule PhenTe-BPinPh compared with the polymer PTB7-Th despite sharing the same volumetric mass density. The precise characterization of structural changes due to backfilling reveals that the volumetric density of backfilled materials plays a minor role in obtaining good backfilling efficiencies and interfaces with large surface contact.

13.
Dalton Trans ; 49(6): 1731-1735, 2020 Feb 14.
Article in English | MEDLINE | ID: mdl-31956882

ABSTRACT

The new bidentate bisphosphino ligand (5-Ph2P-Ace-6-SiMe2)2 (1) binds rhodium(i) chloride and brings it into close proximity to a strong unpolar σ-Si-Si bond, in which it immediately inserts. In the spirocyclic Rh(iii) product of the oxidative addition, (5-Ph2P-Ace-6-SiMe2)2RhCl (2), the two Si atoms are still close enough to engage in weak non-covalent interactions.

14.
Inorg Chem ; 59(3): 1592-1601, 2020 Feb 03.
Article in English | MEDLINE | ID: mdl-31247823

ABSTRACT

We introduce a large-scale synthesis of a sterically encumbered N-heterocyclic olefin (NHO) and illustrate the ability of its deprotonated form to act as an anionic four-electron bridging ligand. The resulting multicenter donating ability has been used to link two low oxidation state Ge(II) centers in close proximity, leading to bridging Ge-Cl-Ge and Ge-H-Ge bonding environments supported by Ge2C2 heterocyclic manifolds. Reduction of a dimeric [RGeCl]2 species (R = anionic NHO, [(MeCNDipp)2C═CH]-; Dipp = 2,6-iPr2C6H3) did not give the expected acyclic RGeGeR analogue of an alkyne, but rather ligand migration/disproportionation transpired to yield the known diorganogermylene R2Ge and Ge metal. This process was examined computationally, and the ability of the reported anionic NHO to undergo atom migration chemistry contrasts with what is typically found with bulky monoanionic ligands (such as terphenyl ligands).

15.
Inorg Chem ; 58(24): 16372-16378, 2019 Dec 16.
Article in English | MEDLINE | ID: mdl-31747261

ABSTRACT

A proximity enforcing diarylsilane ligand is reported, which gives rise to unusual Si-H···M interactions with the d10 metal ions Cu+ and Ag+ upon complexation. These interactions are studied in detail both experimentally and computationally and can be classified to be weakly agostic in nature for the Si-H···Cu interaction. The Si-H···Ag interaction has more signatures of an electrostatic contact.

16.
J Phys Chem Lett ; 10(22): 6973-6982, 2019 Nov 21.
Article in English | MEDLINE | ID: mdl-31633355

ABSTRACT

The coupling of the crystallographic refinement technique Hirshfeld atom refinement (HAR) with the recently constructed libraries of extremely localized molecular orbitals (ELMOs) gives rise to the new quantum-crystallographic method HAR-ELMO. This method is significantly faster than HAR but as accurate and precise, especially concerning the free refinement of hydrogen atoms from X-ray diffraction data, so that the first fully quantum-crystallographic refinement of a protein is presented here. However, the promise of HAR-ELMO exceeds large molecules and protein crystallography. In fact, it also renders possible electron-density investigations of heavy elements in small molecules and facilitates the detection and isolation of systematic errors from physical effects.

17.
Inorg Chem ; 58(19): 13323-13336, 2019 Oct 07.
Article in English | MEDLINE | ID: mdl-31503465

ABSTRACT

A modular route to previously inaccessible classes of ring-fused π-extended heteroacenes bearing the heavy inorganic element tellurium (Te) is presented. These new materials can be viewed as n-doped analogs of molecular graphene subunits that exhibit color tunable visible light phosphorescence in the solid state and in the presence of air. The general mechanism of phosphorescence in these systems was probed experimentally and computationally via time-dependent density functional theory (TD-DFT). The incorporation of Te into π-extended oligoacene frameworks was achieved by an efficient Zr/Te transmetalation protocol; related zirconium-element exchange reactions have been used to prepare both electron-rich and electron-deficient heterocycles containing different elements from throughout the p-block. Therefore, the current study provides a clear path to incorporate inorganic elements into heteroacenes of greater complexity and side group selectivity compared to existing synthetic routes.

18.
Chemistry ; 25(36): 8479-8483, 2019 Jun 26.
Article in English | MEDLINE | ID: mdl-31034114

ABSTRACT

Guest-controlled diastereoselective self-assembly of a diboryltellurophene and a chiral tetrol bearing an indacene backbone was achieved to give either hetero- or homochiral macrocyclic boronic esters, selectively. The heterochiral isomer (hetero-[2+2]Te ) exhibited a higher inclusion ability for electron-deficient aromatic guests, leading to effective quenching of phosphorescence from the diboryltellurophene moieties. The reported macrocycles collectively represent a promising arene sensing approach based on phosphorescence.

19.
Dalton Trans ; 48(14): 4504-4513, 2019 Apr 02.
Article in English | MEDLINE | ID: mdl-30762857

ABSTRACT

The synthesis and structures of the di- and triorgano antimony compounds (6-Ph2P-Ace-5-)2SbCl (1) and (6-Ph2P-Ace-5-)3Sb (2) are presented along with their use as coordination non-innocent ligands for transition metals, leading to the complexes Cl(6-Ph2P-Ace-5-)2SbCuCl (3), Cl2(6-Ph2P-Ace-5-)2SbPdCl (4), Cl2(6-Ph2P-Ace-5-)2SbPtCl (5) and Cl(6-Ph2P-Ace-5-)3SbRhCl (6). The electronic structures of 1-6 were investigated by DFT computations using a set of topological and surface-based real-space bonding indicators derived from the Atoms-In-Molecules (AIM), Non-Covalent interactions Index (NCI), and Electron Localizability Indicator (ELI-D) methods, unravelling a dative Sb-Cu bond character in 3 and polar-covalent Sb-Pd/Pt/Rh interactions in 4-6.

20.
Dalton Trans ; 48(8): 2635-2645, 2019 Feb 19.
Article in English | MEDLINE | ID: mdl-30702734

ABSTRACT

The use of bis(6-diphenylphosphinoacenaphth-5-yl)tellurium (6-Ph2P-Ace-5-)2Te (6) as a ligand for complex formation reactions with CuCl and AgCl is reported, giving rise to the formation of 1 : 1 complexes (6-Ph2P-Ace-5-)2Te·CuCl (7) and (6-Ph2P-Ace-5-)2Te·AgCl (8). The reaction of 6 with (tht)AuCl or (CO)AuCl failed to provide the analogous complex (6-Ph2P-Ace-5-)2Te·AuCl (9), but gave the recently reported (6-diphenylphosphinoacenaphth-5-yl)gold dimer (6-Ph2P-Ace-5-Au)2 (10) and (6-diphenylphosphinoacenaphth-5-yl)tellurenyl chloride, (6-Ph2P-Ace-5-Te)Cl (11). The reaction of 6, 7 and 8 with PhICl2 provided diarylchlorotelluronium chloride [(6-Ph2P-Ace-5-)2TeCl]Cl (12). Compounds 7, 8 and 12 were characterized by multinuclear NMR spectroscopy and single-crystal X-ray crystallography. DFT computations of 6, 7, 8, [(6-Ph2P-Ace-5-)2TeCl]+ (12') and [(8-Me2N-Nap-1-)2TeCl]+ (13') were carried out including a variety of real-space bonding indicators (RSBI) derived from the Atom-In-Molecules (AIM) and the Electron Localizability Indicator (ELI-D) space partitioning schemes. Furthermore, the non-covalent interaction (NCI) index was applied to examine the nature of the Te-X interactions (X = Cu, Ag, P, N, Cl) and complement the AIM and ELI-D approaches.

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