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1.
J Genet ; 96(1): 147-154, 2017 Mar.
Article in English | MEDLINE | ID: mdl-28360399

ABSTRACT

Allelic combinations of major photoperiodic (E1, E3, E4) and maturity (E2) genes have extended the adaptation of quantitative photoperiod sensitive soybean crop from its origin (China ∼35◦N latitude) to both north (up to ∼50◦N) and south (up to 40◦S) latitudes, but their allelic status and role in India (6-35◦N) are unknown. Loss of function and hypoactive alleles of these genes are known to confer photoinsensitivity to long days and early maturity. Early maturity has helped to adapt soybean to short growing season of India. We had earlier found that all the Indian cultivars are sensitive to incandescent long day (ILD) and could identify six insensitive accessions through screening 2071 accessions under ILD. Available models for ILD insensitivity suggested that identified insensitive genotypes should be either e3/e4 or e1 (e1-nl or e1-fs) with either e3 or e4. We found that one of the insensitive accessions (EC 390977) was of e3/e4 genotype and hybridized it with four ILD sensitive cultivars JS 335, JS 95-60, JS 93-05, NRC 37 and an accession EC 538828. Inheritance studies and marker-based cosegregation analyses confirmed the segregation of E3 and E4 genes and identified JS 93-05 and NRC 37 as E3E3E4E4 and EC 538828 as e3e3E4E4. Further, genotyping through sequencing, derived cleaved amplified polymorphic sequences (dCAPS) and cleaved amplified polymorphic sequences (CAPS) markers identified JS 95-60 with hypoactive e1-as and JS 335 with loss of function e3-fs alleles. Presence of photoperiodic recessive alleles in these two most popular Indian cultivars suggested for their role in conferring early flowering and maturity. This observation could be confirmed in F2 population derived from the cross JS 95-60 × EC 390977, where individuals with e1-as e1-as and e4e4 genotypes could flower 7 and 2.4 days earlier, respectively. Possibility of identification of new alleles ormechanism for ILD insensitivity and use of photoinsensitivity in Indian conditions have been discussed.


Subject(s)
Circadian Rhythm/genetics , Genes, Plant , Genomics/methods , Glycine max/genetics , Photoperiod , Alleles , Genotype , Microsatellite Repeats , Phenotype , Polymorphism, Genetic , Quantitative Trait Loci , Quantitative Trait, Heritable
2.
Int Urol Nephrol ; 43(3): 925-8, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21739178

ABSTRACT

Pyelonephritis is rarely considered in the differential diagnosis of acute kidney injury. Acute non-obstructed bacterial pyelonephritis is an infrequent and rarely considered cause of rapidly progressive acute kidney injury. A diagnostic challenge thus develops as it is difficult to clinically differentiate acute kidney injury secondary to ischemic or toxic acute tubular necrosis or papillary necrosis versus acute interstitial nephritis secondary to drugs or infectious pyelonephritis. We describe a case of acute kidney injury due to suppurative pyelonephritis in an elderly immunocompetent man who presented with dysuria, vomiting, and fever and later found to have histologic and radiologic proven pyelonephritis as the cause of acute kidney injury in the absence of hypotension, nephrotoxic agents, non-steroidal analgesics, immunosuppression, urinary tract obstruction, or other structural anomalies. The patient was managed with antimicrobial therapy, hemodialysis, and a short course of corticosteroids.


Subject(s)
Acute Kidney Injury/etiology , Escherichia coli Infections/complications , Pyelonephritis/complications , Acute Kidney Injury/diagnosis , Acute Kidney Injury/therapy , Aged , Anti-Bacterial Agents/therapeutic use , Cefepime , Cephalosporins/therapeutic use , Diagnosis, Differential , Escherichia coli Infections/diagnosis , Escherichia coli Infections/drug therapy , Humans , Male , Ofloxacin/therapeutic use , Pyelonephritis/diagnosis , Pyelonephritis/drug therapy , Pyelonephritis/microbiology , Renal Dialysis
3.
Clin J Am Soc Nephrol ; 5(3): 484-9, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20093350

ABSTRACT

BACKGROUND AND OBJECTIVES: During the past decade, nephrogenic systemic fibrosis (NSF) has been reported in patients who have severe renal impairment and have been exposed to a gadolinium (Gd)-based contrast agent during magnetic resonance imaging (MRI). As a result of positive reporting bias, many suitable patients with chronic kidney disease (CKD) are being denied a highly important form of investigation that can be safely undertaken. We analyzed the safety of Gd-MRI in patients with CKD and varying levels of estimated GFR (eGFR). DESIGN, SETTING, PARTICIPANTS, & MEASUREMENTS: We performed a retrospective analysis of 2053 unselected patients who had CKD and had received Gd-MRI between 1999 and 2009, so as to determine the risk for NSF related to level of CKD, nature of Gd preparation, and Gd dosage. RESULTS: Overall, 2053 patients (63.5% men; mean age 60.6 +/- 15.7 years) had 2278 Gd-MRI scans; their mean eGFR was 40.7 +/- 23.7 ml/min. A total of 918 (44.7%) patients had stage 3, 491 (23.9%) had stage 4, and 117 (5.7%) had predialysis stage 5 CKD. No cases of NSF were identified during an average follow-up period of 28.6 +/- 18.2 months. CONCLUSIONS: In this study, no patients developed NSF during extended follow-up, even after multiple Gd doses in some. Gd-MRI can be safely undertaken in the majority of patients with CKD, but caution is merited for dialysis patients and those with acute kidney injury, with relative caution for predialysis patients with stage 5 CKD.


Subject(s)
Contrast Media/adverse effects , Gadolinium/adverse effects , Kidney Diseases/diagnosis , Magnetic Resonance Imaging , Nephrogenic Fibrosing Dermopathy/chemically induced , Adult , Aged , Chronic Disease , England , Female , Gadolinium DTPA/adverse effects , Glomerular Filtration Rate , Humans , Kidney Diseases/physiopathology , Magnetic Resonance Angiography , Male , Meglumine/adverse effects , Meglumine/analogs & derivatives , Middle Aged , Organometallic Compounds/adverse effects , Patient Selection , Retrospective Studies , Risk Assessment , Risk Factors , Severity of Illness Index , Time Factors
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