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1.
Sci Rep ; 14(1): 11469, 2024 05 20.
Article in English | MEDLINE | ID: mdl-38769392

ABSTRACT

Large amount of wastes are burnt or left to decompose on site or at landfills where they cause air pollution and nutrient leaching to groundwater. Waste management strategies that return these food wastes to agricultural soils recover the carbon and nutrients that would otherwise have been lost, enrich soils and improve crop productivity. The incorporation of liming materials can neutralize the protons released, hence reducing soil acidity and its adverse impacts to the soil environment, food security, and human health. Biochar derived from organic residues is becoming a source of carbon input to soil and provides multifunctional values. Biochar can be alkaline in nature, with the level of alkalinity dependent upon the feedstock and processing conditions. This study conducted a characterization of biochar derived from the pyrolysis process of eggplant and Acacia nilotica bark at temperatures of 300 °C and 600 °C. An analysis was conducted on the biochar kinds to determine their pH, phosphorus (P), as well as other elemental composition. The proximate analysis was conducted by the ASTM standard 1762-84, while the surface morphological features were measured using a scanning electron microscope. The biochar derived from Acacia nilotica bark exhibited a greater yield and higher level of fixed carbon while possessing a lower content of ash and volatile components compared to biochar derived from eggplant. The eggplant biochar exhibits a higher liming ability at 600 °C compared to the acacia nilotica bark-derived biochar. The calcium carbonate equivalent, pH, potassium (K), and phosphorus (P) levels in eggplant biochars increased as the pyrolysis temperature increased. The results suggest that biochar derived from eggplant could be a beneficial resource for storing carbon in the soil, as well as for addressing soil acidity and enhancing nutrients availability, particularly potassium and phosphorus in acidic soils.


Subject(s)
Biomass , Charcoal , Pyrolysis , Charcoal/chemistry , Phosphorus/chemistry , Phosphorus/analysis , Wood/chemistry , Hydrogen-Ion Concentration , Soil/chemistry , Temperature , Acacia/chemistry , Carbon/chemistry , Carbon/analysis
2.
BMC Plant Biol ; 24(1): 304, 2024 Apr 22.
Article in English | MEDLINE | ID: mdl-38644487

ABSTRACT

Biochar is a promising solution to alleviate the negative impacts of salinity stress on agricultural production. Biochar derived from food waste effect was investigated on three plant species, Medicago sativa, Amaranthus caudatus, and Zea mays, under saline environments. The results showed that biochar improved significantly the height by 30%, fresh weight of shoot by 35% and root by 45% of all three species compared to control (saline soil without biochar adding), as well as enhanced their photosynthetic pigments and enzyme activities in soil. This positive effect varied significantly between the 3 plants highlighting the importance of the plant-biochar interactions. Thus, the application of biochar is a promising solution to enhance the growth, root morphology, and physiological characteristics of plants under salt-induced stress.


Subject(s)
Amaranthus , Charcoal , Medicago sativa , Soil , Zea mays , Amaranthus/drug effects , Amaranthus/growth & development , Amaranthus/physiology , Zea mays/growth & development , Zea mays/drug effects , Zea mays/physiology , Medicago sativa/drug effects , Medicago sativa/growth & development , Medicago sativa/physiology , Soil/chemistry , Salinity , Plant Roots/growth & development , Plant Roots/drug effects , Photosynthesis/drug effects
3.
BMC Plant Biol ; 24(1): 131, 2024 Feb 21.
Article in English | MEDLINE | ID: mdl-38383294

ABSTRACT

Early blight (EB), caused by Alternaria solani, is a serious problem in tomato production. Plant growth-promoting rhizobacteria promote plant growth and inhibit plant disease. The present study explored the bio-efficacy of synergistic effect of rhizobacterial isolates and ginger powder extract (GPE) against tomato EB disease, singly and in combination. Six fungal isolates from symptomatic tomato plants were identified as A. solani on the basis of morphological features i.e., horizontal septation (6.96 to 7.93 µm), vertical septation (1.50 to 2.22 µm), conidia length (174.2 to 187.6 µm), conidial width (14.09 to 16.52 µm), beak length (93.06 to 102.26 µm), and sporulation. Five of the twenty-three bacterial isolates recovered from tomato rhizosphere soil were nonpathogenic to tomato seedlings and were compatible with each other and with GPE. Out of five isolates tested individually, three isolates (St-149D, Hyd-13Z, and Gb-T23) showed maximum inhibition (56.3%, 48.3%, and 42.0% respectively) against mycelial growth of A. solani. Among combinations, St-149D + GPE had the highest mycelial growth inhibition (76.9%) over the untreated control. Bacterial strains molecularly characterized as Pseudomonas putida, Bacillus subtilis, and Bacillus cereus and were further tested in pot trials through seed bacterization for disease control. Seeds treated with bacterial consortia + GPE had the highest disease suppression percentage (78.1%), followed by St-149D + GPE (72.2%) and Hyd-13Z + GPE (67.5%). Maximum seed germination was obtained in the bacterial consortia + GPE (95.0 ± 2.04) followed by St-149D + GPE (92.5 ± 1.44) and Hyd-13Z + GPE (90.0 ± 2.04) over control (73.8 ± 2.39) and chemical control as standard treatment (90.0 ± 2). Ginger powder extracts also induce the activation of defence-related enzymes (TPC, PO, PPO, PAL, and CAT) activity in tomato plants. These were highly significant in the testing bacterial inoculants against A. solani infection in tomato crops.


Subject(s)
Agricultural Inoculants , Plant Extracts , Solanum lycopersicum , Zingiber officinale , Animals , Powders , Alternaria , Bacteria , Plant Diseases/microbiology
4.
Sci Rep ; 14(1): 2614, 2024 01 31.
Article in English | MEDLINE | ID: mdl-38297010

ABSTRACT

Maize (Zea mays) is an influential crop in its production across the world. However, the invasion of many phytopathogens greatly affects the maize crop yield at various hotspot areas. Of many diseases, bacterial stalk rot of maize caused by Dickeya zeae results in severe yield reduction, thus the need for efficient management is important. Further, to produce epidemiological information for control of disease outbreaks in the hot spot regions of Sialkot District, Punjab Pakistan, extensive field surveys during 2021 showed that out of 266 visited areas, the highest disease incidence ranging from 66.5 to 78.5% while the lowest incidence was ranging from 9 to 20%. The Maxent modeling revealed that among 19 environmental variables, four variables including temperature seasonality (bio-4), mean temperature of the wettest quarter (bio-8), annual precipitation (bio-12), and precipitation of driest month (bio-14) were significantly contributing to disease distribution in current and coming years. The study outcomes revealed that disease spread will likely increase across four tehsils of Sialkot over the years 2050 and 2070. Our findings will be helpful to policymakers and researchers in devising effective disease management strategies against bacterial stalk rot of maize outbreaks in Sialkot, Pakistan.


Subject(s)
Climate Change , Dickeya , Zea mays , Zea mays/microbiology , Pakistan , Plant Diseases/microbiology , Enterobacteriaceae
5.
Plant Physiol Biochem ; 202: 107960, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37591032

ABSTRACT

Sustainable ecosystem management leads to the use of eco-friendly agricultural techniques for crop production. One of them is the use of metal and metal oxide nanomaterials and nanoparticles, which have proven to be a valuable option for the improvement of agricultural food systems. Moreover, the biological synthesis of these nanoparticles, from plants, bacteria, and fungi, also contributes to their eco-friendly and sustainable characteristics. Nanoparticles, which vary in size from 1 to 100 nm have a variety of mechanisms that are safer and more efficient than conventional fertilizers. Their usage as fertilizers and insecticides in agriculture is gaining favor in the scientific community to maximize crop output. More studies in this field will increase our understanding of this new technology and its broad acceptance in terms of performance, affordability, and environmental protection, as certain nanoparticles may outperform conventional fertilizers and insecticides. Accordingly, to the information gathered in this review, nanoparticles show remarkable potential for enhancing crop production, improving soil quality, and protecting the environment, however, metal and metal oxide NPs are not widely employed in agriculture. Many features of nanoparticles are yet left over, and it is necessary to uncover them. In this sense, this review article provides an overview of various types of metal and metal oxide nanoparticles used in agriculture, their characterization and synthesis, the recent research on them, and their possible application for the improvement of crop productivity in a sustainable manner.


Subject(s)
Insecticides , Metal Nanoparticles , Nanostructures , Ecosystem , Fertilizers , Agriculture , Metals , Oxides
6.
ACS Omega ; 8(25): 22296-22315, 2023 Jun 27.
Article in English | MEDLINE | ID: mdl-37396244

ABSTRACT

The modern agricultural system has issues with the reduction of agricultural productivity due to a wide range of abiotic and biotic stresses. It is also expected that in the future the entire world population may rapidly increase and will surely demand more food. Farmers now utilize a massive quantity of synthetic fertilizers and pesticides for disease management and to increase food production. These synthetic fertilizers badly affect the environment, the texture of the soil, plant productivity, and human health. However, agricultural safety and sustainability depend on an ecofriendly and inexpensive biological application. In contrast to synthetic fertilizers, soil inoculation with plant-growth-promoting rhizobacteria (PGPR) is one of the excellent alternative options. In this regard, we focused on the best PGPR genera, Pseudomonas, which exists in the rhizosphere as well as inside the plant's body and plays a role in sustainable agriculture. Many Pseudomonas spp. control plant pathogens and play an effective role in disease management through direct and indirect mechanisms. Pseudomonas spp. fix the amount of atmospheric nitrogen, solubilize phosphorus and potassium, and also produce phytohormones, lytic enzymes, volatile organic compounds, antibiotics, and secondary metabolites during stress conditions. These compounds stimulate plant growth by inducing systemic resistance and by inhibiting the growth of pathogens. Furthermore, pseudomonads also protect plants during different stress conditions like heavy metal pollution, osmosis, temperature, oxidative stress, etc. Now, several Pseudomonas-based commercial biological control products have been promoted and marketed, but there are a few limitations that hinder the development of this technology for extensive usage in agricultural systems. The variability among the members of Pseudomonas spp. draws attention to the huge research interest in this genus. There is a need to explore the potential of native Pseudomonas spp. as biocontrol agents and to use them in biopesticide development to support sustainable agriculture.

7.
Food Sci Nutr ; 11(6): 3464-3484, 2023 Jun.
Article in English | MEDLINE | ID: mdl-37324842

ABSTRACT

Fragaria × ananassa Duch. (Strawberry) fruit is susceptible to postharvest diseases, thus decrease in quality attributes, such as physiological and biochemical properties leads to decrease in shelf life. The objective of the present study was to check the effect of Selenium NP's and packaging conditions on the shelf life of strawberry (Fragaria × ananassa Duch) fruits. The shelf life was observed with 4 days intervals and examined for characteristics such as physiological weight loss, moisture content, percentage decay loss, peroxidase, catalase, and DPPH radical scavenging. The quality change of postharvest Fragaria × ananassa Duch. was monitored by the application of selenium nanoparticles (T1 plant extract in 10 mM salt solution, T2 plant extract in 30 mM salt solution, T3 plant extract in 40 mM salt solution, T4 distilled water; control) in different packaging materials (plastic bags, cardboard, and brown paper) at different storage conditions (6°C and 25°C). 10 mM, 20 mM, and 30 mM solution of sodium selenite salt, prepared from 1 M stock solution. Selenium nanoparticles were synthesized using Cassia fistula L. extract and sodium selenite salt solution. Polyvinyl alcohol (PVA) was used as a stabilizer. The nanoparticles were characterized through UV-visible spectroscopy and X-Ray diffractometer (XRD). It was observed that the strawberry Fragaria × ananassa Duch. Treated with T1 (CFE and 10 mM salt solution) stored in plastic packaging at ±6°C showed the best physiological parameters and hence the treatment is recommended for storage without affecting the quality of strawberry fruit up to 16 days.

8.
Funct Integr Genomics ; 23(2): 119, 2023 Apr 06.
Article in English | MEDLINE | ID: mdl-37022538

ABSTRACT

Genome editing is a useful, adaptable, and favored technique for both functional genomics and crop enhancement. Over the years, rapidly evolving genome editing technologies, including clustered regularly interspaced short palindromic repeats/CRISPR-associated protein (CRISPR/Cas), transcription activator-like effector nucleases (TALENs), and zinc finger nucleases (ZFNs), have shown broad application prospects in gene function research and improvement of critical agronomic traits in many crops. These technologies have also opened up opportunities for plant breeding. These techniques provide excellent chances for the quick modification of crops and the advancement of plant science in the future. The current review describes various genome editing techniques and how they function, particularly CRISPR/Cas9 systems, which can contribute significantly to the most accurate characterization of genomic rearrangement and plant gene functions as well as the enhancement of critical traits in field crops. To accelerate the use of gene-editing technologies for crop enhancement, the speed editing strategy of gene-family members was designed. As it permits genome editing in numerous biological systems, the CRISPR technology provides a valuable edge in this regard that particularly captures the attention of scientists.


Subject(s)
CRISPR-Cas Systems , Genetic Engineering , Plants, Genetically Modified/genetics , Genetic Engineering/methods , Genome, Plant , Plant Breeding/methods , Crops, Agricultural/genetics , Technology
9.
Plants (Basel) ; 12(3)2023 Jan 17.
Article in English | MEDLINE | ID: mdl-36771517

ABSTRACT

Biocontrol agents (BCA) have been an important tool in agriculture to prevent crop losses due to plant pathogens infections and to increase plant food production globally, diminishing the necessity for chemical pesticides and fertilizers and offering a more sustainable and environmentally friendly option. Fungi from the genus Trichoderma are among the most used and studied microorganisms as BCA due to the variety of biocontrol traits, such as parasitism, antibiosis, secondary metabolites (SM) production, and plant defense system induction. Several Trichoderma species are well-known mycoparasites. However, some of those species can antagonize other organisms such as nematodes and plant pests, making this fungus a very versatile BCA. Trichoderma has been used in agriculture as part of innovative bioformulations, either just Trichoderma species or in combination with other plant-beneficial microbes, such as plant growth-promoting bacteria (PGPB). Here, we review the most recent literature regarding the biocontrol studies about six of the most used Trichoderma species, T. atroviride, T. harzianum, T. asperellum, T. virens, T. longibrachiatum, and T. viride, highlighting their biocontrol traits and the use of these fungal genera in Trichoderma-based formulations to control or prevent plant diseases, and their importance as a substitute for chemical pesticides and fertilizers.

10.
Environ Sci Pollut Res Int ; 30(14): 41272-41285, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36630039

ABSTRACT

For the ecological risk assessment of heavy metals and microplastics in Marala wetlands in Sialkot, Pakistan, samples of sediments, water, aquatic plants (Alternanthera philoxeroides, Typha latifolia, and Ipomoea carnea), and fish (Labeo rohita) were studied from five different locations. Pb, Cd, and Cr concentrations were above permissible limits devised by WHO in sediments and water at most of sites. High concentrations of Cd were recorded in water samples compared to sediments with maximum values recorded at Site-2 (52.08 ± 9.55 mg kg-1) and Site-5 (62.29 ± 10.12 mg kg-1). The maximum concentrations of Cr (7.23 ± 0.40 mg kg-1) and Pb (22.87 ± 0.83 mg kg-1) were found at Site-4 in water samples. The maximum abundance of microplastics (3047 pieces kg-1 of sediments) was at Site-1 with filaments in the highest proportion among the other types. Zn, Ni, and Cu remained generally low in concentrations in both sediments and waters. Plants showed accumulation of heavy metals, notably the amount of Cd (33.36 ± 0.26 mgkg-1) and Ni (163.3 ± 1.30 mgkg-1) absorbed by T. latifolia and A. philoxeroides, respectively were high. Also, photosynthetic pigments in plants seemed to be affected. However, estimated daily intake (EDI) and provisional tolerable weekly intake (PTWI) calculations for the human population consuming fish from this wetland remained below the FAO/WHO limits. PCA analysis revealed the anthropogenic origin of metals that might be causing adverse effects on the biota which depend on this wetland for their food.


Subject(s)
Aquatic Organisms , Environmental Monitoring , Metals, Heavy , Microplastics , Water Pollutants, Chemical , Animals , Humans , Cadmium/analysis , Cyprinidae , Geologic Sediments , Ipomoea , Lead/analysis , Metals, Heavy/analysis , Pakistan , Plastics , Risk Assessment , Typhaceae , Water/analysis , Water Pollutants, Chemical/analysis , Wetlands
11.
Biology (Basel) ; 11(12)2022 Dec 05.
Article in English | MEDLINE | ID: mdl-36552272

ABSTRACT

Food security will be a substantial issue in the near future due to the expeditiously growing global population. The current trend in the agriculture industry entails the extravagant use of synthesized pesticides and fertilizers, making sustainability a difficult challenge. Land degradation, lower production, and vulnerability to both abiotic and biotic stresses are problems caused by the usage of these pesticides and fertilizers. The major goal of sustainable agriculture is to ameliorate productivity and reduce pests and disease prevalence to such a degree that prevents large-scale damage to crops. Agriculture is a composite interrelation among plants, microbes, and soil. Plant microbes play a major role in growth promotion and improve soil fertility as well. Bacillus spp. produces an extensive range of bio-chemicals that assist in plant disease control, promote plant development, and make them suitable for agricultural uses. Bacillus spp. support plant growth by N fixation, P and K solubilization, and phytohormone synthesis, in addition to being the most propitious biocontrol agent. Moreover, Bacilli excrete extracellular metabolites, including antibiotics, lytic enzymes, and siderophores, and demonstrate antagonistic activity against phytopathogens. Bacillus spp. boosts plant resistance toward pathogens by inducing systemic resistance (ISR). The most effective microbial insecticide against insects and pests in agriculture is Bacillus thuringiensis (Bt). Additionally, the incorporation of toxin genes in genetically modified crops increases resistance to insects and pests. There is a constant increase in the identified Bacillus species as potential biocontrol agents. Moreover, they have been involved in the biosynthesis of metallic nanoparticles. The main objective of this review article is to display the uses and application of Bacillus specie as a promising biopesticide in sustainable agriculture. Bacillus spp. strains that are antagonistic and promote plant yield attributes could be valuable in developing novel formulations to lead the way toward sustainable agriculture.

12.
Beilstein J Nanotechnol ; 13: 1068-1107, 2022.
Article in English | MEDLINE | ID: mdl-36262178

ABSTRACT

Carbon dots (CDs) show extensive potential in various fields such as sensing, bioimaging, catalysis, medicine, optoelectronics, and drug delivery due to their unique properties, that is, low cytotoxicity, cytocompatibility, water-solubility, multicolor wavelength tuned emission, photo-stability, easy modification, strong chemical inertness, etc. This review article especially focuses on the recent advancement (2015-2022) in the green synthesis of CDs, their application in metal ions sensing and microbial bioimaging, detection, and viability studies as well as their applications in pathogenic control and plant growth promotion.

13.
Plants (Basel) ; 11(17)2022 Aug 28.
Article in English | MEDLINE | ID: mdl-36079613

ABSTRACT

Strain TSO9 was isolated from a commercial field of wheat (Triticum turgidum L. subsp. durum) located in the Yaqui, Valley, Mexico. Here, the genome of this strain was sequenced, obtaining a total of 5,248,515 bp; 38.0% G + C content; 1,186,514 bp N50; and 2 L50. Based on the 16S rRNA gene sequencing, strain TSO9 was affiliated with the genus Priestia. The genome annotation of Priestia sp. TSO9 contains a total of 147 RNAs, 128 tRNAs, 1 tmRNA, and 5512 coding DNA sequences (CDS) distributed into 332 subsystems, where CDS associated with agricultural purposes were identified, such as (i) virulence, disease, and defense (57 CDS) (i.e., resistance to antibiotics and toxic compounds (34 CDS), invasion and intracellular resistance (12 CDS), and bacteriocins and ribosomally synthesized antibacterial peptides (10 CDS)), (ii) iron acquisition and metabolism (36 CDS), and (iii) secondary metabolism (4 CDS), i.e., auxin biosynthesis. In addition, subsystems related to the viability of an active ingredient for agricultural bioproducts were identified, such as (i) stress response (65 CDS). These genomic traits are correlated with the metabolic background of this strain, and its positive effects on wheat growth regulation reported in this work. Thus, further investigations of Priestia sp. TSO9 are necessary to complement findings regarding its application in agroecosystems to increase wheat yield sustainably.

14.
Molecules ; 27(18)2022 Sep 18.
Article in English | MEDLINE | ID: mdl-36144820

ABSTRACT

Twenty-four analogues of benzimidazole-based thiazoles (1-24) were synthesized and assessed for their in vitro acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE) inhibitory potential. All analogues were found to exhibit good inhibitory potential against cholinesterase enzymes, having IC50 values in the ranges of 0.10 ± 0.05 to 11.10 ± 0.30 µM (for AChE) and 0.20 ± 0.050 µM to 14.20 ± 0.10 µM (for BuChE) as compared to the standard drug Donepezil (IC50 = 2.16 ± 0.12 and 4.5 ± 0.11 µM, respectively). Among the series, analogues 16 and 21 were found to be the most potent inhibitors of AChE and BuChE enzymes. The number (s), types, electron-donating or -withdrawing effects and position of the substituent(s) on the both phenyl rings B & C were the primary determinants of the structure-activity relationship (SAR). In order to understand how the most active derivatives interact with the amino acids in the active site of the enzyme, molecular docking studies were conducted. The results obtained supported the experimental data. Additionally, the structures of all newly synthesized compounds were elucidated by using several spectroscopic methods like 13C-NMR, 1H-NMR and HR EIMS.


Subject(s)
Alzheimer Disease , Cholinesterase Inhibitors , Acetylcholinesterase/metabolism , Alzheimer Disease/drug therapy , Amino Acids , Benzimidazoles/chemistry , Butyrylcholinesterase/chemistry , Cholinesterase Inhibitors/chemistry , Donepezil , Humans , Molecular Docking Simulation , Molecular Structure , Structure-Activity Relationship , Thiazoles/pharmacology
15.
PeerJ ; 10: e13505, 2022.
Article in English | MEDLINE | ID: mdl-35789659

ABSTRACT

Background: Genetic diversity is being lost because of increasing urbanization and decreasing cultivation land, which leads to the abrupt use of wild resources of medicinally aromatic plants (MAPs). Cymbopogon citratus is a morphologically diverse MAP that is largely exploited in the food, cosmetics, and pharmaceutical industries. However, the intraspecific phytochemical and molecular diversity of C. citratus has yet to be explored. Methodology: The germplasm was obtained from four different countries representing Pakistan, India, Bangladesh, and the United States. Oil extraction was performed by hydro distillation, and metabolic profiles of different accessions were generated by GC-MS. Seventeen functional molecular markers based on three genes encoding cytochrome P450, uridyl diphosphate glycosyltransferase and the 5S rRNA gene family were used to explore genetic diversity. Principal component analysis (PCA) and heatmaps were constructed using R software with the help of the gg-plot R package v1.0.5 for data validation. Results: Among the 208 identified metabolites, citral was maximal, with a phytochemical contribution (1.92-27.73%), α-pinene (0.82-15.57%), verbenol (0.24-22.84%), neral (0.23-21.31%) and geranial acetate (0.43-15.65%). In the majority of accessions, citral was the dominant component. The highest concentration of citral was detected in 384541 (27.74%), 384527 (27.52%) belonging to Pakistan and one USA-based accession 38456 (27.71%). Region-specific grouping revealed a relationship between genetic diversity and geographical location. Pakistani accessions 384518, 38452, and 384544 genetically and 384535, 384518, and 384510 were phytochemically diverse. Conclusion: The genetic diversity was more pronounced in cultivated accessions than in wild accessions. Moreover, it was observed that phytochemical diversity correlated with the altitude and temperature of the region.


Subject(s)
Cymbopogon , Oils, Volatile , Oils, Volatile/chemistry , Cymbopogon/chemistry , Phytochemicals , Genetic Variation/genetics
16.
Plant Dis ; 106(1): 307-309, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34328362

ABSTRACT

Fusarium brachygibbosum Padwick, the causal agent of stalk rot disease, is a threat to the maize crop in China. However, genomic information of the pathogen is not available yet. The current study presented the genomic information of F. brachygibbosum, isolated from maize. The genome size is 40.36 Mb and consists of 12,510 genes. The GC content is 47.95%, and there are 913 predicted secretory proteins. The presented genomic data highlighted the virulence features, plant-microbe interaction ability, genes associated with the pathogen's metabolic processes, and host-binding ability. Presented results would extend our knowledge of the pathogen and help us develop suitable disease management strategies.


Subject(s)
Fusarium , Zea mays , Fusarium/genetics , Plant Diseases , Virulence
17.
Front Microbiol ; 12: 587431, 2021.
Article in English | MEDLINE | ID: mdl-34054741

ABSTRACT

Pythium myriotylum is a notorious soil-borne oomycete that causes post-emergence damping-off in chili pepper. Of various disease management strategies, utilization of plant growth promoting rhizobacteria (PGPR) in disease suppression and plant growth promotion is an interesting strategy. The present study was performed to isolate and characterize PGPR indigenous to the chili rhizosphere in Pakistan, and to test the potential to suppress the damping-off and plant growth promotion in chili. Out of a total of 28 antagonists, eight bacterial isolates (4a2, JHL-8, JHL-12, 1C2, RH-24, 1D, 5C, and RH-87) significantly suppressed the colony growth of P. myriotylum in a dual culture experiment. All the tested bacterial isolates were characterized for biochemical attributes, and 16S rRNA sequence based phylogenetic analysis identified these isolates as Flavobacterium spp., Bacillus megaterium, Pseudomonas putida, Bacillus cereus, and Pseudomonas libanensis. All the tested bacterial isolates showed positive test results for ammonia production, starch hydrolase (except 4a2), and hydrogen cyanide production (except 4a2 and 1D). All the tested antagonists produced indole-3-acetic acid (13.4-39.0 µg mL-1), solubilized inorganic phosphate (75-103 µg mL-1), and produced siderophores (17.1-23.7%) in vitro. All the tested bacterial isolates showed varying levels of susceptibility and resistance response against different antibiotics and all these bacterial isolates were found to be non-pathogenic to chili seeds and notably enhanced percentage seed germination, plumule, redical length, and vigor index over un-inoculated control. Additionally, under pathogen pressure, bacterization increased the defense related enzymes such as Peroxidase (PO), polyphenol oxidase (PPO), and phenylalanine ammonia-lyase (PAL) activates. Moreover, the treatment of chili seeds with these bacterial isolates significantly suppressed the damping-off caused by P. myriotylum and improved PGP traits compared to the control. In addition, a positive correlation was noticed between shoot, root length, and dry shoot and root weight, and there was a negative correlation between dry shoot, root weight, and seedling percentage mortality. These results showed that native PGPR possesses multiple traits beneficial to the chili plants and can be used to develop eco-friendly and effective seed treatment formulation as an alternative to synthetic chemical fungicides.

18.
Sci Rep ; 10(1): 13859, 2020 08 17.
Article in English | MEDLINE | ID: mdl-32807801

ABSTRACT

Phytophthora capsici is a notorious fungus which infects many crop plants at their early and late growth stages. In the present study, twelve P. capsici isolates were morphologically characterized, and based on pathogenicity assays; two highly virulent isolates causing post-emergence damping-off on locally cultivated chilli pepper were screened. Two P. capsici isolates, HydPak1 (MF322868) and HydPk2 (MF322869) were identified based on internal transcribed spacer (ITS) sequence homology. Plant growth promoting rhizobacteria (PGPR) play a significant role in disease suppression and plant growth promotion in various crops. Out of fifteen bacterial strains recovered from chilli rhizosphere, eight were found potential antagonists to P. capsici in vitro. Bacterial strains with strong antifungal potential were subjected to biochemical and molecular analysis. All tested bacterial strains, were positive for hydrogen cyanide (HCN), catalase production and indole-3-acetic acid (IAA) production (ranging from 6.10 to 56.23 µg ml-1), while siderophore production varied between 12.5 and 33.5%. The 16S rRNA sequence analysis of tested bacterial strains showed 98-100% identity with Pseudomonas putida, P. libanensis, P. aeruginosa, Bacillus subtilis, B. megaterium, and B. cereus sequences available in the National Center for Biotechnology Information (NCBI) GenBank nucleotide database. All sequences of identified bacteria were submitted to GenBank for accessions numbers (MH796347-50, MH796355-56, MH801129 and MH801071). Greenhouse studies concluded that all tested bacterial strains significantly suppressed the P. capsici infections (52.3-63%) and enhanced the plant growth characters in chilli pepper. Efficacy of many of these tested rhizobacteria is being first time reported against P. capsici from Pakistan. Plant growth promoting rhizobacteria (PGPR) exhibiting multiple traits may be used in the development of new, eco-friendly, and effective bioformulations as an alternative to synthetic fungicides.


Subject(s)
Antibiosis , Bacillus cereus/physiology , Bacillus megaterium/physiology , Bacillus subtilis/physiology , Bacillus/physiology , Capsicum/growth & development , Capsicum/microbiology , Host Microbial Interactions/physiology , Phytophthora/pathogenicity , Pseudomonas aeruginosa/physiology , Pseudomonas putida/physiology , Pseudomonas/physiology , Fungicides, Industrial , Pakistan , Phytophthora/physiology
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