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1.
BMC Bioinformatics ; 25(1): 12, 2024 Jan 09.
Article in English | MEDLINE | ID: mdl-38195379

ABSTRACT

The integration of biology, computer science, and statistics has given rise to the interdisciplinary field of bioinformatics, which aims to decode biological intricacies. It produces extensive and diverse features, presenting an enormous challenge in classifying bioinformatic problems. Therefore, an intelligent bioinformatics classification system must select the most relevant features to enhance machine learning performance. This paper proposes a feature selection model based on the fractal concept to improve the performance of intelligent systems in classifying high-dimensional biological problems. The proposed fractal feature selection (FFS) model divides features into blocks, measures the similarity between blocks using root mean square error (RMSE), and determines the importance of features based on low RMSE. The proposed FFS is tested and evaluated over ten high-dimensional bioinformatics datasets. The experiment results showed that the model significantly improved machine learning accuracy. The average accuracy rate was 79% with full features in machine learning algorithms, while FFS delivered promising results with an accuracy rate of 94%.


Subject(s)
Algorithms , Fractals , Computational Biology , Machine Learning
2.
PLoS One ; 18(2): e0279743, 2023.
Article in English | MEDLINE | ID: mdl-36735701

ABSTRACT

BACKGROUND: Artificial intelligence (AI) has gained momentum in behavioural health interventions in recent years. However, a limited number of studies use or apply such methodologies in the early detection of depression. A large population needing psychological-intervention is left unidentified due to barriers such as cost, location, stigma and a global shortage of health workers. Therefore, it is essential to develop a mass screening integrative approach that can identify people with depression at its early stage to avoid a potential crisis. OBJECTIVES: This study aims to understand the feasibility and efficacy of using AI-enabled chatbots in the early detection of depression. METHODS: We use Dialogflow as a conversation interface to build a Depression Analysisn (DEPRA) chatbot. A structured and authoritative early detection depression interview guide, which contains 27 questions combining the structured interview guide for the Hamilton Depression Scale (SIGH-D) and the inventory of depressive symptomatology (IDS-C), underpins the design of the conversation flow. To attain better accuracy and a wide variety of responses, we train Dialogflow with the utterances collected from a focus group of 10 people. The occupation of the focus group members included academics and HDR candidates who are conscious, vigilant and have a clear understanding of the questions. In addition, DEPRA is integrated with a social media platform to provide practical access to all the participants. For the non-clinical trial, we recruited 50 participants aged between 18 and 80 from across Australia. To evaluate the practicability and performance of DEPRA, we also asked participants to submit a user satisfaction survey at the end of the conversation. RESULTS: A sample of 50 participants, with an average age of 34.7 years, completed this non-clinical trial. More than half of the participants (54%) are male and the major ethnicities are Asian (63%), Middle Eastern (25%), and others 12%. The first group comprises professional academic staff and HDR candidates, the second and third groups comprise relatives, friends, and volunteers who were recruited via social media promotions. DEPRA uses two scientific scoring systems, QIDS-SR and IDS-SR to verify the results of early depression detection. As the results indicate, both scoring systems return a similar outcome with slight variations for different depression levels. According to IDS-SR, 30% of participants were healthy, 14% mild, 22% moderate, 14% severe, and 20% very severe. QIDS-SR suggests 32% were healthy, 18% mild, 10% moderate, 18% severe, and 22% very severe. Furthermore, the overall satisfaction rate of using DEPRA was 79% indicating that the participants had a high rate of user satisfaction and engagement. CONCLUSION: DEPRA shows promises as a feasible option for developing a mass screening integrated approach for early detection of depression. Although the chatbot is not intended to replace the functionality of mental health professionals, it does show promise as a means of assisting with automation and concealed communication with verified scoring systems.


Subject(s)
Depression , Depressive Disorder, Major , Humans , Male , Adult , Adolescent , Young Adult , Middle Aged , Aged , Aged, 80 and over , Female , Depression/diagnosis , Depressive Disorder, Major/psychology , Artificial Intelligence , Surveys and Questionnaires , Focus Groups
3.
Article in English | MEDLINE | ID: mdl-24109934

ABSTRACT

Steganographic techniques allow secret data to be embedded inside another host data such as an image or a text file without significant changes to the quality of the host data. In this research, we demonstrate how steganography can be used as the main mechanism to build an access control model that gives data owners complete control to their sensitive cardiac health information hidden in their own Electrocardiograms. Our access control model is able to protect the privacy of users, the confidentiality of medical data, reduce storage space and make it more efficient to upload and download large amount of data.


Subject(s)
Computer Systems , Electrocardiography/instrumentation , Access to Information , Algorithms , Computer Security , Confidentiality , Electrocardiography/methods , Humans , Privacy , Signal Processing, Computer-Assisted
4.
IEEE Trans Biomed Eng ; 60(12): 3322-30, 2013 Dec.
Article in English | MEDLINE | ID: mdl-23708767

ABSTRACT

With the growing number of aging population and a significant portion of that suffering from cardiac diseases, it is conceivable that remote ECG patient monitoring systems are expected to be widely used as point-of-care (PoC) applications in hospitals around the world. Therefore, huge amount of ECG signal collected by body sensor networks from remote patients at homes will be transmitted along with other physiological readings such as blood pressure, temperature, glucose level, etc., and diagnosed by those remote patient monitoring systems. It is utterly important that patient confidentiality is protected while data are being transmitted over the public network as well as when they are stored in hospital servers used by remote monitoring systems. In this paper, a wavelet-based steganography technique has been introduced which combines encryption and scrambling technique to protect patient confidential data. The proposed method allows ECG signal to hide its corresponding patient confidential data and other physiological information thus guaranteeing the integration between ECG and the rest. To evaluate the effectiveness of the proposed technique on the ECG signal, two distortion measurement metrics have been used: the percentage residual difference and the wavelet weighted PRD. It is found that the proposed technique provides high-security protection for patients data with low (less than 1%) distortion and ECG data remain diagnosable after watermarking (i.e., hiding patient confidential data) and as well as after watermarks (i.e., hidden data) are removed from the watermarked data.


Subject(s)
Confidentiality , Data Compression/methods , Electrocardiography/methods , Signal Processing, Computer-Assisted , Computer Communication Networks , Electronic Health Records , Home Care Services , Humans , Telemetry
5.
Article in English | MEDLINE | ID: mdl-21097076

ABSTRACT

In Wireless tele-cardiology applications, ECG signal is widely used to monitor cardiac activities of patients. Accordingly, in most e-health applications, ECG signals need to be combined with patient confidential information. Data hiding and watermarking techniques can play a crucial role in ECG wireless tele-monitoring systems by combining the confidential information with the ECG signal since digital ECG data is huge enough to act as host to carry tiny amount of additional secret data. In this paper, a new steganography technique is proposed that helps embed confidential information of patients into specific locations (called special range numbers) of digital ECG host signal that will cause minimal distortion to ECG, and at the same time, any secret information embedded is completely extractable. We show that there are 2.1475 × 10(9) possible special range numbers making it extremely difficult for intruders to identify locations of secret bits. Experiments show that percentage residual difference (PRD) of watermarked ECGs can be as low as 0.0247% and 0.0678% for normal and abnormal ECG segments (taken from MIT-BIH Arrhythmia database) respectively.


Subject(s)
Confidentiality , Electrocardiography , Information Systems , Humans
6.
Article in English | MEDLINE | ID: mdl-21097218

ABSTRACT

Since ECG is huge in size sending large volume data over resource constrained wireless networks is power consuming and will reduce the energy of nodes in Body Sensor Networks (BSN). Therefore, compression of ECGs and diagnosis of diseases from compressed ECGs will play key roles in enhancing the life-time of body sensor networks. Moreover, discrimination between ventricular Tachycardia and Ventricular Fibrillation is of crucial importance to save human life. Existing algorithms work only on plain text ECGs to distinguish between the two, and therefore, not suitable in BSN. VT and VF are often similar in patterns and in filtration of noise and improper attribute selection in compressed ECGs will make it even harder to classify them properly. In this paper, a supervised attribute selection algorithm called Correlation Based Feature Selection (CFS) [4] is used to filter the unwanted attributes and select the most relevant attributes. We then use the selected attributes to train and classify VT and VF using Radial Basis Function (RBF) Neural Network and k-nearest neighbour techniques. We experimented with 103 ECG samples taken from MIT-BIH Malignant Ventricular Ectopy Database. Results showed that accuracy can be as high as 93.3% when attribute selection is used and large number of training samples are provided.


Subject(s)
Electrocardiography/methods , Tachycardia, Ventricular/therapy , Ventricular Fibrillation , Algorithms , Cardiology/methods , Data Compression , Heart Ventricles/pathology , Humans , Models, Statistical , Nerve Net , Neural Networks, Computer , Reproducibility of Results , Sensitivity and Specificity , Signal Processing, Computer-Assisted , Tachycardia, Ventricular/pathology
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