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1.
PLoS One ; 14(7): e0220055, 2019.
Article in English | MEDLINE | ID: mdl-31329628

ABSTRACT

Cryopreservation is the most common method for long-term cell storage. Successful cryopreservation of cells depends on optimal freezing conditions, freezer storage and a proper thawing technique to minimize the cellular damage that can occur during the cryopreservation process. These factors are especially critical for sensitive stem cells with a consequential and significant impact on viability and functionality. Until now, slow-freezing has been the routine method of cryopreservation but, more recently rapid-cooling techniques have also been proposed. In this study, an ultra-rapid cooling technique [1] was performed for the first time on human mesenchymal stem cells and the effectiveness evaluated in comparison with the conventional slow-freezing procedure. A thin nylon-membrane carrier was used combined with different cryoprotective agents: dimethyl sulfoxide, ethylene glycol and/or trehalose. Various aspects of the low cryoprotective doses and the ultra-rapid cooling procedure of the human mesenchymal stem cells were examined including: the physical properties of the nylon-support, cells encumbrance, viability, proliferation and differentiation. The expression of cell surface markers and apoptosis were also investigated. The study used an ultra-rapid cooling/warming method and showed an overall cell integrity preservation (83-99%), with no significant differences between dimethyl sulfoxide or ethylene glycol treatment (83-87%) and a substantial cell viability of 68% and 51%, respectively. We confirmed a discrepancy also observed by other authors in cell viability and integrity, which implies that caution is necessary when assessing and reporting cell viability data.


Subject(s)
Cryopreservation/methods , Mesenchymal Stem Cells/cytology , Apoptosis , Cell Survival , Cells, Cultured , Humans , Mesenchymal Stem Cells/metabolism , Time
2.
BMC Genomics ; 14: 540, 2013 Aug 09.
Article in English | MEDLINE | ID: mdl-23937585

ABSTRACT

BACKGROUND: Solanum torvum Sw is worldwide employed as rootstock for eggplant cultivation because of its vigour and resistance/tolerance to the most serious soil-borne diseases as bacterial, fungal wilts and root-knot nematodes. The little information on Solanum torvum (hereafter Torvum) resistance mechanisms, is mostly attributable to the lack of genomic tools (e.g. dedicated microarray) as well as to the paucity of database information limiting high-throughput expression studies in Torvum. RESULTS: As a first step towards transcriptome profiling of Torvum inoculated with the nematode M. incognita, we built a Torvum 3' transcript catalogue. One-quarter of a 454 full run resulted in 205,591 quality-filtered reads. De novo assembly yielded 24,922 contigs and 11,875 singletons. Similarity searches of the S. torvum transcript tags catalogue produced 12,344 annotations. A 30,0000 features custom combimatrix chip was then designed and microarray hybridizations were conducted for both control and 14 dpi (day post inoculation) with Meloidogyne incognita-infected roots samples resulting in 390 differentially expressed genes (DEG). We also tested the chip with samples from the phylogenetically-related nematode-susceptible eggplant species Solanum melongena. An in-silico validation strategy was developed based on assessment of sequence similarity among Torvum probes and eggplant expressed sequences available in public repositories. GO term enrichment analyses with the 390 Torvum DEG revealed enhancement of several processes as chitin catabolism and sesquiterpenoids biosynthesis, while no GO term enrichment was found with eggplant DEG.The genes identified from S. torvum catalogue, bearing high similarity to known nematode resistance genes, were further investigated in view of their potential role in the nematode resistance mechanism. CONCLUSIONS: By combining 454 pyrosequencing and microarray technology we were able to conduct a cost-effective global transcriptome profiling in a non-model species. In addition, the development of an in silico validation strategy allowed to further extend the use of the custom chip to a related species and to assess by comparison the expression of selected genes without major concerns of artifacts. The expression profiling of S. torvum responses to nematode infection points to sesquiterpenoids and chitinases as major effectors of nematode resistance. The availability of the long sequence tags in S. torvum catalogue will allow precise identification of active nematocide/nematostatic compounds and associated enzymes posing the basis for exploitation of these resistance mechanisms in other species.


Subject(s)
Gene Expression Profiling , Host-Parasite Interactions/genetics , Solanum/genetics , Solanum/parasitology , Tylenchoidea/physiology , Animals , Chitinases/genetics , High-Throughput Nucleotide Sequencing , Molecular Sequence Annotation , Oligonucleotide Array Sequence Analysis , RNA, Messenger/genetics , Sequence Analysis, RNA , Sesquiterpenes/metabolism , Solanum/enzymology , Solanum/physiology , Species Specificity
3.
Cryobiology ; 63(1): 12-6, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21524646

ABSTRACT

Cryopreservation protocols based on slow freezing or vitrification often result in cell injury due to ice formation, cell dehydration and/or toxic concentrations of cryoprotectant (CPA). In this study, we present a cryopreservation technique based on low, non-toxic concentrations of cryoprotectants (≈ 2-4M) combined with a rapid cooling rate in the liquid nitrogen phase (-196°C). Protocols for successfully cryopreserving the plant parasitic nematodes Globodera tabacum tabacum, Heterodera schachtii and Meloidogyne incognita were developed, as demonstrated by the high survival rates and reproducibility of cyst and root-knot nematode species post-cryostorage. This approach for effective cryopreservation of viable plant-parasitic nematodes was developed by inducing an "apparent vitrification" by rapid cooling of the microscopic samples in less than 2M of cryoprotectant. The extremely thin structure (15-20 µm width, 350-400 µm length) of these nematodes, in combination with a direct and rapid exposure to LN(2), likely prevents the formation of damaging ice crystals. Moreover, this procedure results in viability of both short- and long-cryostorage samples. These techniques could potentially be used for the near-indefinite preservation of thousands of different nematode species. A cryo-nematode collection produced in our lab is available and presented here.


Subject(s)
Cold Temperature , Cryopreservation/methods , Cryoprotective Agents/pharmacology , Nematoda/physiology , Animals
4.
Cryobiology ; 56(1): 1-7, 2008 Feb.
Article in English | MEDLINE | ID: mdl-17950266

ABSTRACT

There is an increasing need for methods of cryopreservation of arthropods. In particular, Lepidoptera are extremely important in entomological applications for the protection of agricultural crops and forest ecosystems and also in many aspects of biodiversity conservation. Yet, few studies have dealt with cryopreservation techniques in species of this insect order. The aim of this study was to examine the chill sensitivity of eggs of the greater wax moth Galleria mellonella (L.) and the possibility to cryopreserve the eggs by vitrification methods. One day-old eggs were dechlorinated with water solutions of 1.25% sodium hypochlorite and 0.04% Tween 80, treated with cryoprotective agents in two steps, subjected to rapid cooling by immersion in LN and stored in a mechanical freezer for 48 h at -140 degrees C. They exhibited survival rates of 1.6+/-0.5% after being cooled in LN and 0.6+/-0.2% after being stored in the mechanical freezer. 92.9% of the larvae that hatched from cryopreserved eggs completed development regularly, producing adults that bred and laid fertile eggs. The hatching rate of eggs in the F1 and F2 generations was higher than 90%. Adult emergences of the progeny of eggs stored at ultra-low temperatures allowed us to establish a laboratory colony.


Subject(s)
Cryopreservation/methods , Moths/embryology , Ovum/physiology , Animals , Cryoprotective Agents/pharmacology , Dehydration , Female , Male , Ovum/drug effects , Sodium Hypochlorite/pharmacology
5.
Cryobiology ; 52(3): 319-22, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16487955

ABSTRACT

Low temperatures can assure the long-term or even indefinite preservation of important biological specimens. Nematode cryopreservation allows for the availability of large numbers of living nematodes at any one time, especially for experimental purposes. New isolates of Bursaphelenchus have recently been collected, including Bursaphelenchus eremus (Rühm) Goodey. This species was identified in north-central Italy on dying oak trees and from the bark beetle Scolytus intricatus Ratzeburg as dauer larvae. We therefore, sought to develop a cryopreservation technique for the long-term storage of all available Bursaphelenchus spp. The technique consists of a rapid-cooling protocol involving immersion in a liquid nitrogen bath before storage of the frozen samples in a mechanical freezer at -140 degrees C. The survival of nematodes subjected to this rapid-cooling protocol was higher than previously reported using slow-cooling methods and is suitable for several species of Bursaphelenchus and other phytoparasitic nematodes.


Subject(s)
Cryopreservation/methods , Nematoda/physiology , Animals , Cryoprotective Agents , Ethylene Glycol , Freezing , Italy , Movement , Quercus/parasitology , Reproduction
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