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1.
Biologicals ; 41(6): 355-63, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23827519

ABSTRACT

Heparin is a sulfated glycosaminoglycan (GAG), which contains N-acetylated or N-sulfated glucosamine (GlcN). Heparin, which is generally obtained from the healthy porcine intestines, is widely used as an anticoagulant during dialysis and treatments of thrombosis such as disseminated intravascular coagulation. Dermatan sulfate (DS) and chondroitin sulfate (CS), which are galactosamine (GalN)-containing GAGs, are major process-related impurities of heparin products. The varying DS and CS contents between heparin products can be responsible for the different anticoagulant activities of heparin. Therefore, a test to determine the concentrations of GalN-containing GAG is essential to ensure the quality and safety of heparin products. In this study, we developed a method for determination of relative content of GalN from GalN-containing GAG in heparin active pharmaceutical ingredients (APIs). The method validation and collaborative study with heparin manufacturers and suppliers showed that our method has enough specificity, sensitivity, linearity, repeatability, reproducibility, and recovery as the limiting test for GalN from GalN-containing GAGs. We believe that our method will be useful for ensuring quality, efficacy, and safety of pharmaceutical heparins. On July 30, 2010, the GalN limiting test based on our method was adopted in the heparin sodium monograph in the Japanese Pharmacopoeia.


Subject(s)
Chromatography, High Pressure Liquid/methods , Drug Contamination/prevention & control , Galactosamine/analysis , Heparin/analysis , Chondroitin Sulfates/analysis , Chondroitin Sulfates/chemistry , Dermatan Sulfate/analysis , Dermatan Sulfate/chemistry , Fluorescent Dyes/chemistry , Heparin/chemistry , Hydrolysis , Models, Chemical , Reproducibility of Results , para-Aminobenzoates/chemistry
2.
Chem Biodivers ; 10(6): 1099-108, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23776025

ABSTRACT

Chemical investigation of the glandular trichome exudate of Erodium pelargoniflorum (Geraniaceae) led to the isolation of two dodecyl disaccharide derivatives, named pelargoside A1 and pelargoside B1 (1 and 2, resp.). The structures of 1 and 2 were determined as dodecyl 4-O-acetyl-α-L-rhamnopyranosyl-(1→2)-4-O-acetyl-ß-D-fucopyranoside and dodecyl 3,4-di-O-acetyl-α-L-rhamnopyranosyl-(1→2)-4-O-acetyl-ß-D-fucopyranoside, respectively, by spectroscopic studies, including 2D-NMR, and chemical transformations. In addition, undecyl, tridecyl, and tetradecyl homologs of 1 and 2, named pelargosides A2-A4 and pelargosides B2-B4, were also characterized as minor constituents of the exudate.


Subject(s)
Disaccharides/chemistry , Geraniaceae/chemistry , Disaccharides/isolation & purification , Flowers/chemistry , Gas Chromatography-Mass Spectrometry , Plant Leaves/chemistry , Plant Stems/chemistry , Trichomes/chemistry
3.
Structure ; 20(9): 1585-95, 2012 Sep 05.
Article in English | MEDLINE | ID: mdl-22863568

ABSTRACT

The leukocyte cell-surface antigen CD38 is the major nicotinamide adenide dinucleotide glycohydrolase in mammals, and its ectoenzyme activity is involved in calcium mobilization. CD38 is also a raft-dependent signaling molecule. CD38 forms a tetramer on the cell surface, but the structural basis and the functional significance of tetramerization have remained unexplored. We identified the interfaces contributing to the homophilic interaction of mouse CD38 by site-specific crosslinking on the cell surface with an expanded genetic code, based on a crystallographic analysis. A combination of the three interfaces enables CD38 to tetramerize: one interface involving the juxtamembrane α-helix is responsible for the formation of the core dimer, which is further dimerized via the other two interfaces. This dimerization of dimers is required for the catalytic activity and the localization of CD38 in membrane rafts. The glycosylation prevents further self-association of the tetramer. Accordingly, the tetrameric interaction underlies the multifaceted actions of CD38.


Subject(s)
ADP-ribosyl Cyclase 1/chemistry , Membrane Glycoproteins/chemistry , Membrane Microdomains/metabolism , Protein Multimerization , ADP-ribosyl Cyclase 1/genetics , ADP-ribosyl Cyclase 1/metabolism , Amino Acid Motifs , Amino Acid Sequence , Amino Acid Substitution , Animals , Cell Line , Chromatography, Gel , Cross-Linking Reagents/chemistry , Crystallography, X-Ray , Cystine/chemistry , Glycosylation , Membrane Glycoproteins/genetics , Membrane Glycoproteins/metabolism , Membrane Lipids/metabolism , Mice , Models, Molecular , Molecular Sequence Data , Mutagenesis, Site-Directed , Protein Interaction Domains and Motifs , Protein Processing, Post-Translational , Protein Stability , Protein Structure, Quaternary
4.
FEBS J ; 279(12): 2096-107, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22487239

ABSTRACT

Heterozygous mutations in the JAG1 gene, encoding Notch ligand Jagged1, cause Alagille syndrome (ALGS). As most of the mutations are nonsense or frameshift mutations producing inactive truncated proteins, haplo-insufficiency is considered the major pathogenic mechanism of ALGS. However, the molecular mechanisms by which the missense mutations cause ALGS remain unclear. Here we analyzed the functional properties of four ALGS missense mutant proteins, P163L, R184H, G386R and C714Y, using transfected mammalian cells. P163L and R184H showed Notch-binding activities similar to that of the wild-type when assessed by immunoprecipitation. However, their trans-activation and cis-inhibition activities were almost completely impaired. These mutant proteins localized mainly to the endoplasmic reticulum (ER), suggesting that the mutations induced improper protein folding. Furthermore, the mutant proteins bound more strongly to the ER chaperone proteins calnexin and calreticulin than the wild-type did. C714Y also localized to the ER, but possessed significant trans-activation activity and lacked enhanced binding to the chaperones, indicating a less severe phenotype. The properties of G386R were the same as those of the wild-type. Dominant-negative effects were not detected for any mutant protein. These results indicate that accumulation in the ER and binding to the chaperones correlate with the impaired signal-transduction activities of the missense mutant proteins, which may contribute to the pathogenic mechanism of ALGS. Our findings, which suggest the requirement for cell-surface localization of Jagged1 for cis-inhibition activities, also provide important information for understanding the molecular basis of Notch-signaling pathways.


Subject(s)
Alagille Syndrome/metabolism , Calcium-Binding Proteins/metabolism , Intercellular Signaling Peptides and Proteins/metabolism , Membrane Proteins/metabolism , Mutation, Missense/genetics , Alagille Syndrome/genetics , Blotting, Western , Calcium-Binding Proteins/genetics , Fluorescent Antibody Technique , HeLa Cells , Humans , Immunoprecipitation , Intercellular Signaling Peptides and Proteins/genetics , Jagged-1 Protein , Membrane Proteins/genetics , Protein Binding , Receptors, Notch/genetics , Receptors, Notch/metabolism , Serrate-Jagged Proteins , Signal Transduction/genetics , Signal Transduction/physiology
5.
Int J Cancer ; 130(10): 2366-76, 2012 May 15.
Article in English | MEDLINE | ID: mdl-21780104

ABSTRACT

Aberrant glycosylation has been observed in many types of cancer, but the mechanism of glycosylation change is still poorly understood. To elucidate relationships between glycosylation and colon cancer progression, we analyzed glycosylation status of ß-haptoglobin (ß-Hp) obtained from 46 cancer patients, 14 inflammatory bowel disease patients and 38 normal subjects. Aleuria aurantia lectin reactivity with cancer ß-Hp was much higher than in the other two study groups. These results were confirmed by lectin blotting and microarray assay using other lectins directed to fucosyl residues. Levels of such glycans were correlated with stage of colon cancer progression. Reactivity with fucosylated glycans was eliminated by treatment with α1-3/4 fucosidase but not α1-6 fucosidase, indicating that enhanced lectin reactivity with the fucose moiety of colon cancer ß-Hp is due to Fucα1-3/4GlcNAc. Moreover, site-specific glycan occupancy was determined by sequential LC/MS analysis. Mass spectrometric analysis showed that fucosylation of ß-Hp was higher in colon cancer patients than in other subjects. In particular, fucosylation at Asn 241 of ß-Hp in sera of colon cancer patients was clearly higher than in the other groups, and the ratio of fucosylated glycopeptides containing Asn 241 decreased greatly after treatment with α1-3/4 fucosidase. In conclusion, the level of α1-3/4 fucosyl epitope at Asn 241 of ß-Hp is potentially useful as a novel marker for colon cancer.


Subject(s)
Colonic Neoplasms/metabolism , Haptoglobins/metabolism , Aged , Asparagine , Biomarkers, Tumor/analysis , Colon/metabolism , Colonic Neoplasms/diagnosis , Female , Fucose/metabolism , Glycosylation , Haptoglobins/chemistry , Humans , Inflammatory Bowel Diseases/metabolism , Male , Polysaccharides/metabolism
6.
Biologicals ; 39(3): 171-80, 2011 May.
Article in English | MEDLINE | ID: mdl-21549615

ABSTRACT

The various monosaccharide composition analysis methods were evaluated as monosaccharide test for glycoprotein-based pharmaceuticals. Neutral and amino sugars were released by hydrolysis with 4-7N trifluoroacetic acid. The monosaccharides were N-acetylated if necessary, and analyzed by high-performance liquid chromatography (HPLC) with fluorometric or UV detection after derivatization with 2-aminopyridine, ethyl 4-aminobenzoate, 2-aminobenzoic acid or 1-phenyl-3-methyl-5-pyrazolone, or high pH anion exchange chromatography with pulsed amperometric detection (HPAEC-PAD). Sialic acids were released by mild acid hydrolysis or sialidase digestion, and analyzed by HPLC with fluorometric detection after derivatization with 1,2-diamino-4,5-methylenedioxybenzene, or HPAEC-PAD. These methods were verified for resolution, linearity, repeatability, and accuracy using a monosaccharide standard solution, a mixture of epoetin alfa and beta, and alteplase as models. It was confirmed that those methods were useful for ensuring the consistency of glycosylation. It is considered essential that the analytical conditions including desalting, selection of internal standards, release of monosaccharides, and gradient time course should be determined carefully to eliminate interference of sample matrix. Various HPLC-based monosaccharide analysis methods were evaluated as a carbohydrate test for glycoprotein pharmaceuticals by an inter-laboratory study.


Subject(s)
Biological Products/chemistry , Monosaccharides/analysis , Amino Sugars/analysis , Amino Sugars/standards , Biological Products/standards , Chromatography, High Pressure Liquid/methods , Chromatography, High Pressure Liquid/standards , Chromatography, Ion Exchange/methods , Chromatography, Ion Exchange/standards , Erythropoietin/chemistry , Excipients , Glycosylation , Monosaccharides/standards , Recombinant Proteins , Reference Standards , Reproducibility of Results , Sialic Acids/analysis , Sialic Acids/standards , Tissue Plasminogen Activator/chemistry
8.
Biologicals ; 38(5): 539-43, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20452241

ABSTRACT

Heparin sodium and heparin calcium, which are widely used as anti-coagulants, are known to potentially contain the natural impurity dermatan sulfate (DS). Recently serious adverse events occurred in patients receiving heparin sodium in the US, and a contaminant oversulfated chondroitin sulfate (OSCS) was found to be a cause of the events. To ensure the quality and safety of pharmaceutical heparins, there is need of a physicochemical identification test that can discriminate heparin from the heparin-related substances as well as a sensitive purity test for OSCS. Recently, HPLC with a strong-anion exchange column was proposed as the methods for identifying heparin and determination of OSCS in heparin sodium. Although this method is convenient and easy to perform, the only column suitable for this purpose is the Dionex IonPac AS11-HC column. In this study, we developed alternative identification test and test for OSCS in both heparin sodium and heparin calcium using a weak anion-exchange column. The identification test allowed for separation of heparin from the impurity DS and contaminant OSCS in a shorter time. The purity test provided enough sensitivity, specificity, linearity, recovery and repeatability for OSCS. We believe that our methods will be useful for quality control of pharmaceutical heparins.


Subject(s)
Chondroitin Sulfates/isolation & purification , Drug Contamination , Heparin/analysis , Heparin/chemistry , Anion Exchange Resins/chemistry , Chondroitin Sulfates/analysis , Chromatography, High Pressure Liquid/methods , Electrophoresis, Capillary/methods , Heparin/isolation & purification
9.
J Biol Chem ; 285(23): 17301-9, 2010 Jun 04.
Article in English | MEDLINE | ID: mdl-20335177

ABSTRACT

The extracellular matrix (ECM) molecules play important roles in many biological and pathological processes. During tissue remodeling, the ECM molecules that are glycosylated are different from those of normal tissue owing to changes in the expression of many proteins that are responsible for glycan synthesis. Vitronectin (VN) is a major ECM molecule that recognizes integrin on hepatic stellate cells (HSCs). The present study attempted to elucidate how changes in VN glycans modulate the survival of HSCs, which play a critical role in liver regeneration. Plasma VN was purified from partially hepatectomized (PH) and sham-operated (SH) rats at 24 h after operation and non-operated (NO) rats. Adhesion of rat HSCs (rHSCs), together with phosphorylation of focal adhesion kinase, in PH-VN was decreased to one-half of that in NO- or SH-VN. Spreading of rHSCs on desialylated NO-VN was decreased to one-half of that of control VN, indicating the importance of sialylation of VN for activation of HSCs. Liquid chromatography/multiple-stage mass spectrometry analysis of Glu-C glycopeptides of each VN determined the site-specific glycosylation. In addition to the major biantennary complex-type N-glycans, hybrid-type N-glycans were site-specifically present at Asn(167). Highly sialylated O-glycans were found to be present in the Thr(110)-Thr(124) region. In PH-VN, the disialyl O-glycans and complex-type N-glycans were decreased while core-fucosylated N-glycans were increased. In addition, immunodetection after two-dimensional PAGE indicated the presence of hyper- and hyposialylated molecules in each VN and showed that hypersialylation was markedly attenuated in PH-VN. This study proposes that the alteration of VN glycosylation modulates the substrate adhesion to rat HSCs, which is responsible for matrix restructuring.


Subject(s)
Hepatic Stellate Cells/metabolism , Liver Regeneration , Sialic Acids/metabolism , Vitronectin/metabolism , Animals , Cell Survival , Extracellular Matrix/metabolism , Focal Adhesion Protein-Tyrosine Kinases/metabolism , Fucose/chemistry , Glycosylation , Male , Mass Spectrometry/methods , Rats , Rats, Wistar , Threonine/chemistry , Vitronectin/chemistry
10.
J Biol Chem ; 284(44): 30209-17, 2009 Oct 30.
Article in English | MEDLINE | ID: mdl-19729452

ABSTRACT

HNK-1 (human natural killer-1) glyco-epitope, a sulfated glucuronic acid attached to N-acetyllactosamine on the nonreducing termini of glycans, is highly expressed in the nervous system. Our previous report showed that mice lacking a glucuronyltransferase (GlcAT-P), a key enzyme for biosynthesis of the HNK-1 epitope, showed reduced long term potentiation at hippocampal CA1 synapses. In this study, we identified an alpha-amino-3-hydroxy-5-methylisoxazole propionate (AMPA)-type glutamate receptor subunit, GluR2, which directly contributes to excitatory synaptic transmission and synaptic plasticity, as a novel HNK-1 carrier molecule. We demonstrated that the HNK-1 epitope is specifically expressed on the N-linked glycan(s) on GluR2 among the glutamate receptors tested, and the glycan structure, including HNK-1 on GluR2, was determined using liquid chromatography-tandem mass spectrometry. As for the function of HNK-1 on GluR2, we found that the GluR2 not carrying HNK-1 was dramatically endocytosed and expressed less on the cell surface compared with GluR2 carrying HNK-1 in both cultured hippocampal neurons and heterologous cells. These results suggest that HNK-1 stabilizes GluR2 on neuronal surface membranes and regulates the number of surface AMPA receptors. Moreover, we showed that the expression of the HNK-1 epitope enhanced the interaction between GluR2 and N-cadherin, which has important roles in AMPA receptor trafficking. Our findings suggest that the HNK-1 epitope on GluR2 regulates cell surface stability of GluR2 by modulating the interaction with N-cadherin.


Subject(s)
CD57 Antigens/physiology , Cadherins/metabolism , Neurons/chemistry , Receptors, AMPA/chemistry , Animals , Epitopes , Hippocampus/cytology , Mice , Protein Stability , Protein Transport , Receptors, AMPA/metabolism , Receptors, Glutamate/chemistry
11.
Biol Pharm Bull ; 32(5): 796-800, 2009 May.
Article in English | MEDLINE | ID: mdl-19420744

ABSTRACT

Many glycoproteins and glycosaminoglycans are approved for clinical use. Carbohydrate moieties in biopharmaceuticals affect not only their physicochemical properties and thermal stability, but also their reactivity with their receptors and circulating half-life. Modification of glycans is one target of drug design for enhancement of efficacy. Meanwhile, there have been reports of serious adverse events caused by some carbohydrates. It is crucial to maintain the constancy of carbohydrate moieties for the efficient and safe use of glycosylated biopharmaceuticals. On the other hand, for scientific, safety-related, and economic reasons, changes in the manufacturing process are frequently made either during the development or after the approval of new biopharmaceuticals. Furthermore, the development of biosimilar glycoprotein products has been attempted by different manufacturers. Changes in pharmaceutical manufacturing processes possibly cause alteration of glycosylation and raise concerns about alteration of their quality, safety, and efficacy. In this review we provide some current topics of glycosylated biopharmaceuticals from the viewpoints of efficacy, safety, and the manufacturing process and discuss the significance of glycosylation analysis for development of biopharmaceuticals.


Subject(s)
Biopharmaceutics/methods , Glycoproteins/chemistry , Glycosaminoglycans/chemistry , Glycoproteins/adverse effects , Glycoproteins/metabolism , Glycosaminoglycans/adverse effects , Glycosaminoglycans/metabolism , Glycosylation , Protein Processing, Post-Translational , Recombinant Proteins/adverse effects , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism
12.
J Proteome Res ; 8(7): 3415-29, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19453144

ABSTRACT

Certain glycan motifs in glycoproteins are involved in several biological events and diseases. To understand the roles of these motifs, a method is needed to identify the glycoproteins that carry them. We previously demonstrated that liquid chromatography-multiple-stage mass spectrometry (LC-MSn) allowed for differentiation of oligosaccharides attached to Lewis-motifs, such as Lewisx(Lex, Galbeta1-4(Fucalpha1-3)GlcNAc) from other glycans. We successfully discriminated Lex-conjugated oligosaccharides from other N-linked oligosaccharides derived from mouse kidney proteins by using Lewis-motif-distinctive ions, a deoxyhexose (dHex)+hexose (Hex)+N-acetylhexsosamine (HexNAc) fragment (m/z 512), and a Hex+HexNAc fragment (m/z 366). In the present study, we demonstrated that this method could be used to identify the Lex-conjugated glycoproteins. All proteins in the mouse kidney were digested into peptides, and the fucosylated glycopeptides were enriched by lectin-affinity chromatography. The resulting fucosylated glycopeptides were subjected to two different runs of LC-MSn using a Fourier- transform ion cyclotron resonance mass spectrometer (FTICR-MS) and an ion trap-type mass spectrometer. After the first run, we picked out product ion spectra of the expected Lex-conjugated glycopeptides based on the presence of Lewis-motif-distinctive ions and assigned a peptide+HexNAc or peptide+(dHex)HexNAc fragment in each spectrum. Then the fucosylated glycopeptides were subjected to a second run in which the peptide-related fragments were set as precursor ions. We successfully identified gamma-glutamyl transpeptidase 1 (gamma-GTP1), low-density lipoprotein receptor-related protein 2 (LRP2), and a cubilin precursor as Lex-conjugated glycoproteins by sequencing of 2-5 glycopeptides. In addition, it was deduced that cadherin 16, dipeptidase I, H-2 class I histocompatibility antigen, K-K alpha precursor (H2-Kk), and alanyl (membrane) aminopeptidase could be Lex-conjugated glycoproteins from the good agreement between the experimental and theoretical masses and fragment patterns. The results indicated that our method could be applicable for the identification and screening of glycoproteins carrying target glycan-motifs, such as Lewis epitopes.


Subject(s)
Chromatography, Liquid/methods , Glycoproteins/chemistry , Kidney/metabolism , Lewis X Antigen/chemistry , Mass Spectrometry/methods , Amino Acid Motifs , Animals , Databases, Protein , Glycopeptides/chemistry , Lectins/chemistry , Mice , Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase/chemistry , Peptides/chemistry , Polysaccharides/chemistry , Proteomics/methods
13.
Methods Mol Biol ; 534: 239-48, 2009.
Article in English | MEDLINE | ID: mdl-19277547

ABSTRACT

Liquid chromatography/multiple-stage mass spectrometry (LC/MS( n )) is an effective means for the site-specific glycosylation analysis of a limited quantity of glycoproteins, such as gel-separated proteins. Generally, a tryptic digest of the glycoprotein is separated by reversed-phase LC, and peptide sequencing and glycosylation analysis are achieved with on-line MS( n ). In this chapter, a protocol for the LC/MS/MS/MS of a proteolytic digest of a gel-separated glycoprotein is described.


Subject(s)
Glycoproteins/analysis , Glycosylation , Sequence Analysis, Protein/methods , Tandem Mass Spectrometry/methods , Carbohydrate Sequence , Chromatography, Liquid/methods , Electrophoresis, Polyacrylamide Gel/methods , Glycoproteins/chemistry , Glycoproteins/metabolism , Humans , Methylation , Molecular Sequence Data , Protein Processing, Post-Translational/physiology , Reducing Agents/pharmacology
14.
Immunology ; 126(3): 336-45, 2009 Mar.
Article in English | MEDLINE | ID: mdl-18710403

ABSTRACT

Changes in the glycan structures of some glycoproteins have been observed in autoimmune diseases such as systemic lupus erythematosus (SLE) and rheumatoid arthritis. A deficiency of alpha-mannosidase II, which is associated with branching in N-glycans, has been found to induce SLE-like glomerular nephritis in a mouse model. These findings suggest that the alteration of the glycosylation has some link with the development of SLE. An analysis of glycan alteration in the disordered tissues in SLE may lead to the development of improved diagnostic methods and may help to clarify the carbohydrate-related pathogenic mechanism of inflammation in SLE. In this study, a comprehensive and differential analysis of N-glycans in kidneys from SLE-model mice and control mice was performed by using the quantitative glycan profiling method that we have developed previously. In this method, a mixture of deuterium-labelled N-glycans from the kidneys of SLE-model mice and non-labelled N-glycans from kidneys of control mice was analysed by liquid chromatography/mass spectrometry. It was revealed that the low-molecular-mass glycans with simple structures, including agalactobiantennary and paucimannose-type oligosaccharides, markedly increased in the SLE-model mouse. On the other hand, fucosylated and galactosylated complex type glycans with high branching were decreased in the SLE-model mouse. These results suggest that the changes occurring in the N-glycan synthesis pathway may cause the aberrant glycosylations on not only specific glycoproteins but also on most of the glycoproteins in the SLE-model mouse. The changes in glycosylation might be involved in autoimmune pathogenesis in the model mouse kidney.


Subject(s)
Kidney/metabolism , Lupus Erythematosus, Systemic/metabolism , Polysaccharides/metabolism , Animals , Chromatography, Liquid/methods , Disease Models, Animal , Glycosylation , Lupus Nephritis/metabolism , Mass Spectrometry/methods , Mice , Mice, Inbred MRL lpr , Oligosaccharides/metabolism
15.
J Biol Chem ; 283(48): 33036-45, 2008 Nov 28.
Article in English | MEDLINE | ID: mdl-18812317

ABSTRACT

Laminin-332 (Lm332) is a large heterotrimeric glycoprotein that has been identified as a scattering factor, a regulator of cancer invasion as well as a prominent basement membrane component of the skin. Past studies have identified the functional domains of Lm332 and revealed the relationships between its activities and the processing of its subunits. However, there is little information available concerning the effects of N-glycosylation on Lm332 activities. In some cancer cells, an increase of beta1,6-GlcNAc catalyzed by N-acetylglucosaminyltransferase V (GnT-V) is related to the promotion of cancer cell motility. By contrast, bisecting GlcNAc catalyzed by N-acetylglucosaminyltransferase III (GnT-III) suppresses the further processing with branching enzymes, such as GnT-V, and the elongation of N-glycans. To examine the effects of those N-glycosylations to Lm332 on its activities, we purified Lm332s from the conditioned media of GnT-III- and GnT-V-overexpressing MKN45 cells. Lectin blotting and mass spectrometry analyses revealed that N-glycans containing the bisecting GlcNAc and beta1,6-GlcNAc structures were strongly expressed on Lm332 purified from GnT-III-overexpressing (GnT-III-Lm332) and GnT-V-overexpressing (GnT-V-Lm332) cells, respectively. Interestingly, the cell adhesion activity of GnT-III-Lm332 was apparently decreased compared with those of control Lm332 and GnT-V-Lm332. In addition, the introduction of bisecting GlcNAc to Lm332 resulted in a decrease in its cell scattering and migration activities. The weakened activities were most likely derived from the impaired alpha3beta1 integrin clustering and resultant focal adhesion formation. Taken together, our results clearly demonstrate for the first time that N-glycosylation may regulate the biological function of Lm332. This finding could introduce a new therapeutic strategy for cancer.


Subject(s)
Cell Adhesion Molecules/metabolism , Cell Movement , N-Acetylglucosaminyltransferases/metabolism , Neoplasm Proteins/metabolism , Skin Neoplasms/enzymology , Basement Membrane/enzymology , Basement Membrane/pathology , Cell Adhesion/genetics , Cell Adhesion Molecules/genetics , Cell Line, Tumor , Cell Movement/genetics , Glycosylation , Humans , Integrin alpha3beta1/genetics , Integrin alpha3beta1/metabolism , N-Acetylglucosaminyltransferases/genetics , Neoplasm Invasiveness/genetics , Neoplasm Invasiveness/pathology , Neoplasm Proteins/genetics , Polysaccharides/genetics , Polysaccharides/metabolism , Protein Subunits/genetics , Protein Subunits/metabolism , Skin/enzymology , Skin/pathology , Skin Neoplasms/genetics , Skin Neoplasms/pathology , Kalinin
16.
Biochemistry ; 47(38): 10132-54, 2008 Sep 23.
Article in English | MEDLINE | ID: mdl-18729387

ABSTRACT

IgLON family proteins, including limbic-associated membrane protein (LAMP), opioid-binding cell adhesion molecule (OBCAM), neurotrimin, and Kilon, are immunoglobulin (Ig) superfamily cell adhesion molecules. These molecules are composed of three Ig domains and a glycosylphosphatidylinositol (GPI) anchor and contain six or seven potential N-glycosylation sites. Although their glycosylations are supposed to be associated with the development of the central nervous system like other Ig superfamily proteins, they are still unknown because of difficulty in isolating individual proteins with a high degree of homology in performing carbohydrate analysis. In this study, we conducted simultaneous site-specific glycosylation analysis of rat brain IgLON proteins by liquid chromatography and multiple-stage mass spectrometry (LC-MS ( n )). The rat brain GPI-linked proteins were enriched and separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The four proteins were extracted from the gel, and subjected to LC-MS ( n ) after proteinase digestions. A set of glycopeptide MS data, including the mass spectrum, the mass spectrum in the selected ion monitoring mode, and the product ion spectra, was selected from all data based on carbohydrate-related ions in the MS/MS spectrum. The peptide portion and the carbohydrate structure were identified on the basis of peptide-related ion and carbohydrate-related ions, and the accurate mass. The site-specific glycosylations of four proteins were elucidated as follows. N-Glycans near the N-terminal were disialic acid-conjugated complex- and hybrid-type oligosaccharides. The first Ig domains were occupied by Man-5-9. Diverse oligosaccharides, including Lewis a/x-modified glycans, a brain-specific glycan known as BA-2, and Man-5, were found to be attached to the third Ig domain. Three common structures of glycans were found in the GPI moiety of LAMP, OBCAM, and neurotrimin.


Subject(s)
Brain/metabolism , Membrane Glycoproteins/analysis , Membrane Glycoproteins/metabolism , Multigene Family , Amino Acid Sequence , Animals , Carrier Proteins/analysis , Carrier Proteins/metabolism , Cell Adhesion Molecules/analysis , Cell Adhesion Molecules/metabolism , Cell Adhesion Molecules, Neuronal/metabolism , Chromatography, Liquid/methods , GPI-Linked Proteins , Glycosylation , Immunoglobulin Subunits/analysis , Immunoglobulin Subunits/metabolism , Lysosomal Membrane Proteins/analysis , Lysosomal Membrane Proteins/metabolism , Male , Molecular Sequence Data , Neural Cell Adhesion Molecules/metabolism , Rats , Rats, Wistar , Tandem Mass Spectrometry/methods
17.
J Chromatogr B Analyt Technol Biomed Life Sci ; 869(1-2): 20-30, 2008 Jun 15.
Article in English | MEDLINE | ID: mdl-18514042

ABSTRACT

Changes in the glycosylation of some serum proteins are associated with certain diseases. In this study, we performed simultaneous site-specific glycosylation analysis of abundant serum glycoproteins by LC/Qq-TOF MS of human serum tryptic digest, the albumin of which was depleted. The glycopeptide peaks on the chromatogram were basically assigned by database searching with modified peak-list text files of MS/MS spectra and then based on mass differences of glycan units from characterized glycopeptides. Glycopeptide of IgG, haptoglobin and ceruloplasmin were confirmed by means of a comparison of their retention times and m/z values with those obtained by LC/MS of commercially available glycoproteins. Mass spectrometric carbohydrate heterogeneity in the assigned glycopeptides was analyzed by an additional LC/MS. We successfully demonstrated site-specific glycosylation of 23 sites in abundant serum glycoproteins.


Subject(s)
Chromatography, High Pressure Liquid/methods , Glycoproteins/blood , Glycoproteins/chemistry , Tandem Mass Spectrometry/methods , Databases, Protein , Glycopeptides/analysis , Glycopeptides/isolation & purification , Glycoproteins/metabolism , Glycosylation , Humans , Protein Processing, Post-Translational
18.
Carbohydr Res ; 343(13): 2329-35, 2008 Sep 08.
Article in English | MEDLINE | ID: mdl-18490007

ABSTRACT

Fibronectin (FN) is a multifunctional glycoprotein present in the extracellular matrix (ECM) and plasma. We previously reported that the glycosylation and ligand-binding of vitronectin (VN) change markedly after partial hepatectomy (PH). Here we show the changes of FN during liver regeneration. The yields of purified sham-operated (SH-) and PH-FN were higher than that of non-operated (NO)-FN, while binding activities of FNs to ECM ligands were changed only slightly by hepatectomy. The carbohydrate concentration of PH-FN decreased to 66% of that of NO- and SH-FN. By using LC/MS(n), eight kinds of complex-type N-glycan structures were found to be present in all FNs, and bi- and trisialobiantennary glycans were the major structures. Fucosylation was markedly increased, while O-acetylation of sialic acid was found to be decreased in PH-FN. The alterations in glycosylation and biological activities of FN after PH are different from those of VN, suggesting that these glycoproteins play different biological functions in tissue remodeling.


Subject(s)
Fibronectins/chemistry , Glycosylation , Hepatectomy/methods , Liver Regeneration , Animals , Cell Physiological Phenomena , Dose-Response Relationship, Drug , Extracellular Matrix/metabolism , Glycoproteins/chemistry , Ligands , Liver Diseases/metabolism , N-Acetylneuraminic Acid/chemistry , Protein Binding , Rats , Vitronectin/chemistry
19.
Glycobiology ; 18(4): 331-8, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18263654

ABSTRACT

The HNK-1 epitope has a unique structure comprising the sulfated trisaccharide (HSO(3)-3GlcAbeta1-3Galbeta1-4GlcNAc), and two glucuronyltransferases (GlcAT-P and GlcAT-S) are key enzymes for its biosynthesis. However, the different functional roles of these enzymes in its biosynthesis remain unclear. Recently, we reported that a nonsulfated form of this epitope, which is biosynthesized by GlcAT-S but not by GlcAT-P, is expressed on two metalloproteases in mouse kidney. In this study, we found that a novel glycoprotein carrying the nonsulfated HNK-1 epitope in mouse kidney was enriched in the nuclear fraction. The protein was affinity-purified and identified as laminin-1, and we also confirmed the N-linked oligosaccharide structure including nonsulfated HNK-1 epitope derived from laminin-1 by mass spectrometry. Curiously, immunofluorescence staining of kidney sections revealed that laminin-1 appeared not to be colocalized with the nonsulfated HNK-1 epitope. However, proteinase treatment strengthened the signals of both laminin-1 and the nonsulfated HNK-1 epitope, resulting in overlapping of them. These results indicate that the nonsulfated HNK-1 epitope on laminin-1 is usually embedded and masked in the robust basement membrane in tight association with other proteins. To clarify the associated proteins and the functional role of the carbohydrate epitope, we investigated the interaction between laminin-1 and alpha-dystroglycan through their glycans in mouse kidney using the overlay assay technique. We obtained evidence that glucuronic acid as well as sialic acid inhibited this interaction, suggesting that the nonsulfated HNK-1 epitope on laminin-1 may regulate its binding and play a role in maintenance of the proper structure in the kidney basal lamina.


Subject(s)
CD57 Antigens/metabolism , Kidney/metabolism , Laminin/metabolism , Laminin/physiology , Animals , Basement Membrane/chemistry , Basement Membrane/metabolism , CD57 Antigens/physiology , Carbohydrate Sequence , Carrier Proteins/chemistry , Carrier Proteins/metabolism , Carrier Proteins/physiology , Dystroglycans/metabolism , Epitopes/metabolism , Epitopes/physiology , Glycoproteins/chemistry , Glycoproteins/metabolism , Glycoproteins/physiology , Laminin/chemistry , Mice , Mice, Inbred C57BL , Models, Biological , Molecular Sequence Data , Protein Binding , Sulfates/metabolism
20.
J Chromatogr A ; 1160(1-2): 263-9, 2007 Aug 10.
Article in English | MEDLINE | ID: mdl-17570377

ABSTRACT

N-Glycolylneuraminic acid (NeuGc), an acidic nine-carbon sugar, is produced in several animals, such as cattle and mice. Since human cells cannot synthesize NeuGc, it is considered to be immunogenic in humans. Recently, NeuGc contamination was reported in human embryonic stem cells cultured with xenogeneic serum and cells, suggesting that possibly NeuGc may harm the efficacy and safety of cell therapy products. Sialic acids have been determined by derivatization with 1,2-diamino-4,5-methylenedioxybenzene (DMB) followed by liquid chromatography/mass spectrometry (LC/MS) and liquid chromatography/tandem mass spectrometry (LC/MS/MS); however, the limited availability of cell therapy products requires more sensitive and specific methods for the quality test. Here we studied the use of nano-flow liquid chromatography/Fourier transformation ion cyclotron resonance mass spectrometry (nanoLC/FTMS) and nanoLC/MS/MS for NeuGc-specific determination at a low femtomole level. Using our method, we found NeuGc contamination of the human cell line (HL-60RG cells) cultured with human serum. Our method needs only 2.5x10(3) cells for one injection and would be applicable to the determination of NeuGc in cell therapy products.


Subject(s)
Cell- and Tissue-Based Therapy/standards , Chromatography, Liquid/methods , Cyclotrons , Fourier Analysis , Mass Spectrometry/methods , Nanotechnology/methods , Neuraminic Acids/analysis , Calibration , Cell Membrane/chemistry , HL-60 Cells , Humans , N-Acetylneuraminic Acid/analysis , N-Acetylneuraminic Acid/chemistry , Neuraminic Acids/chemistry , Quality Control , Subcellular Fractions/chemistry
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