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1.
J Clin Virol ; 137: 104785, 2021 04.
Article in English | MEDLINE | ID: mdl-33711694

ABSTRACT

INTRODUCTION: The COVID-19 pandemic has led to high demand of diagnostic tools. Rapid antigen detection tests have been developed and many have received regulatory acceptance such as CE IVD or FDA markings. Their performance needs to be carefully assessed. MATERIALS AND METHODS: 158 positive and 40 negative retrospective samples collected in saline and analyzed by a laboratory-developed RT-PCR test were used to evaluate Sofia (Quidel), Standard Q (SD Biosensor), and Panbio™ (Abbott) rapid antigen detection tests (RADTs). A subset of the specimens was subjected to virus culture. RESULTS: The specificity of all RADTs was 100 % and the sensitivity and percent agreement was 80 % and 85 % for Sofia, 81 % and 85 % for Standard Q, and 83 % and 86 % for Panbio™, respectively. All three RADTs evaluated in this study reached a more than 90 % sensitivity for samples with a high viral load as estimated from the low Ct (Cycle threshold) values in the reference RT-PCR. Virus culture was successful in 80 % of specimens with a Ct value <25. CONCLUSIONS: As expected, the RADTs were less sensitive than RT-PCR. However, they benefit from the speed and ease of testing, and lower price as compared to RT-PCR. Repeated testing in appropriate settings may improve the overall performance.


Subject(s)
Antigens, Viral/analysis , COVID-19 Serological Testing/methods , COVID-19/diagnosis , SARS-CoV-2/isolation & purification , COVID-19/immunology , COVID-19/virology , COVID-19 Nucleic Acid Testing/methods , COVID-19 Testing/methods , Humans , Nasopharynx/virology , Retrospective Studies , SARS-CoV-2/immunology , Sensitivity and Specificity
2.
Int J Infect Dis ; 104: 111-116, 2021 Mar.
Article in English | MEDLINE | ID: mdl-33352330

ABSTRACT

OBJECTIVES: The aim was to characterise age- and sex-specific severe acute respiratory syndrome coronavirus disease-2 (SARS-CoV-2) RT-PCR sampling frequency and positivity rate in Greater Helsinki area in Finland during February-June 2020. We also describe the laboratory capacity building for these diagnostics. METHODS: Laboratory registry data for altogether 80,791 specimens from 70,517 individuals was analysed. The data included the date of sampling, sex, age and the SARS-CoV-2 RT-PCR test result on specimens collected between 1 February and 15 June 2020. RESULTS: Altogether, 4057/80,791 (5.0%) of the specimens were positive and 3915/70,517 (5.6%) of the individuals were found positive. In all, 37% of specimens were from male and 67% from female subjects. While the number of positive cases was similar in male and female subjects, the positivity rate was significantly higher in male subjects: 7.5% of male and 4.4% of female subjects tested positive. The highest incidence/100,000 was observed in those aged ≥80 years. The proportion of young adults in positive cases increased in late May 2020. Large dips in testing frequency were observed during every weekend and also during public holidays. CONCLUSIONS: Our data suggest that men pursue SARS-CoV-2 testing less frequently than women. Consequently, a subset of coronavirus disease-2019 infections in men may have gone undetected. People sought testing less frequently on weekends and public holidays, and this may also lead to missing of positive cases. The proportion of young adults in positive cases increased towards the end of the study period, which may suggest their returning back to social behaviour with an increased risk of infection.


Subject(s)
COVID-19 Testing/statistics & numerical data , COVID-19/epidemiology , SARS-CoV-2/isolation & purification , Adolescent , Adult , Age Factors , Aged , Aged, 80 and over , COVID-19/virology , Child , Child, Preschool , Epidemiological Monitoring , Female , Finland/epidemiology , Humans , Infant , Laboratories, Hospital , Male , Middle Aged , Registries , SARS-CoV-2/genetics , Sex Factors , Young Adult
3.
Neuropeptides ; 47(2): 67-73, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23261359

ABSTRACT

AIMS: Neuropeptide Y (NPY) and Y1 receptors are involved in the mechanisms related to the development of atherosclerosis. We investigated the effects of systemically given NPY and its receptor Y1-antagonist on the development of atherosclerosis and associated inflammatory molecules in ApoE(-/-) mice during high-fat diet. METHODS: Five weeks old ApoE(-/-) were fed atherogenic high cholesterol diet for 8weeks. The mice were injected with two doses of NPY (50 or 100µg/kg) or Y1 receptor antagonist BIBP3226 (100µg/kg) or vehicle intraperitoneally for 8weeks. Atherosclerosis lesion areas in aortic arch and descending aortas were determined, inflammatory molecules and NPY were determined in aortic wall, spleen, liver or in serum. RESULTS: Neuropeptide Y1 receptor antagonist, BIBP3226 (100µg/kg) increased atherosclerotic lesion areas compared to vehicle in descending aortas in ApoE(-/-) mice (p=0.021). The expression levels of macrophage-derived cytokine, interleukin-12 (IL-12) in spleens and livers were 8-fold increased with BIBP3226 (p=0.006 and p=0.003, respectively) as determined by RT-qPCR. Cholesterol levels in serum correlated positively with VCAM-1 expression (p=0.003) and negatively with NPY expression (p=0.044) in aortic wall in mice treated with BIBP 3226. CONCLUSIONS: The results indicate that systemic treatment with Y1-antagonist enhances atherosclerosis development in ApoE deficient mice by triggering an overwhelming IL-12 production. The findings are highly valuable for evaluation of the development potential of Y1 ligands for therapeutics to treat or prevent atherosclerosis.


Subject(s)
Apolipoproteins E/deficiency , Atherosclerosis/metabolism , Interleukin-12/biosynthesis , Receptors, Neuropeptide Y/antagonists & inhibitors , Adipokines/blood , Animals , Aorta/metabolism , Apolipoproteins E/genetics , Arginine/analogs & derivatives , Arginine/pharmacology , Atherosclerosis/pathology , Cholesterol/blood , Diet, High-Fat , Immunohistochemistry , Lipids/blood , Mice , Mice, Knockout , Muscle, Smooth, Vascular/metabolism , Plaque, Atherosclerotic/pathology , Real-Time Polymerase Chain Reaction , Vascular Cell Adhesion Molecule-1/metabolism
4.
Neuropeptides ; 46(6): 321-8, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23122776

ABSTRACT

AIMS: The role of neuropeptide Y (NPY) and its gene polymorphisms in the development of atherosclerosis has become increasingly evident. In asthma, NPY has been shown to be involved as immunomodulator. In this study, we investigated the role of two functional NPY polymorphisms, NPY-Leu7Pro (rs16139) and NPY-399C/T (rs16147) and obesity for the development of asthma as well as atherosclerosis in asthmatic and non-asthmatic subjects. Also, we measured heart rate variability (HRV) and NPY in serum since these might contribute through these polymorphisms to both diseases. METHODS AND RESULTS: Thousand hundred and seventy six Finnish young adults were genotyped and three groups (G1-G3) were formed based on the observed diplotypes. The NPY-Pro7 allele always co-existed with the NPY-399T allele indicating complete linkage disequilibrium. Here we show that overweight (BMI≥25kg/m2) was associated with 2.5-fold increased risk for asthma in subjects with the NPY-399T allele without NPY-Pro7 allele (G2, n=716). Overweight was also associated with increased atherosclerosis determined by carotid intima media thickness (cIMT), but asthma seemed to be more significant determinant than overweight in determing cIMT having a decreasing effect. NPY concentration in serum was diplotype-driven (G1=792.2(29.5), G2=849.0(18.9), G3=873.9(45.2) pg/ml) and correlated positively with cIMT in the group having NPY-Pro7 allele (G3, n=142). However, the subjects with asthma had a negative NPY-cIMT relationship. Total HRV was increased in asthma and correlated negatively with cIMT irrespective of the NPY genotype. CONCLUSIONS: Overweight together with the NPY-399T allele without NPY-Pro7 allele was associated with increased risk for asthma. Atherosclerosis was decreased in subjects with asthma depending on the NPY genotype. The results reveal novel insights into the genetics and biology of the relationship of atherosclerosis and asthma.


Subject(s)
Asthma/genetics , Atherosclerosis/epidemiology , Neuropeptide Y/genetics , Overweight/genetics , Adolescent , Alleles , Anthropometry , Asthma/etiology , Body Height/physiology , Body Weight/physiology , Carotid Intima-Media Thickness , Child , Child, Preschool , Cohort Studies , DNA/genetics , Data Interpretation, Statistical , Endothelium, Vascular/physiology , Female , Finland/epidemiology , Gene Frequency , Genotype , Heart Rate/physiology , Humans , Lipids/blood , Male , Neuropeptide Y/physiology , Overweight/complications , Polymorphism, Genetic/physiology , Risk
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