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1.
Ecology ; 97(11): 3243, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27870054

ABSTRACT

This dataset provides growth form classifications for 67,413 vascular plant species from North, Central, and South America. The data used to determine growth form were compiled from five major integrated sources and two original publications: the Botanical Information and Ecology Network (BIEN), the Plant Trait Database (TRY), the SALVIAS database, the USDA PLANTS database, Missouri Botanical Garden's Tropicos database, Wright (2010), and Boyle (1996). We defined nine plant growth forms based on woodiness (woody or non-woody), shoot structure (self-supporting or not self-supporting), and root traits (rooted in soil, not rooted in soil, parasitic or aquatic): Epiphyte, Liana, Vine, Herb, Shrub, Tree, Parasite, or Aquatic. Species with multiple growth form classifications were assigned the growth form classification agreed upon by the majority (>2/3) of sources. Species with ambiguous or otherwise not interpretable growth form assignments were excluded from the final dataset but are made available with the original data. Comparisons with independent estimates of species richness for the Western hemisphere suggest that our final dataset includes the majority of New World vascular plant species. Coverage is likely more complete for temperate than for tropical species. In addition, aquatic species are likely under-represented. Nonetheless, this dataset represents the largest compilation of plant growth forms published to date, and should contribute to new insights across a broad range of research in systematics, ecology, biogeography, conservation, and global change science.


Subject(s)
Plant Development , Plants/classification , Central America , Demography , North America , South America , Species Specificity
2.
Dentomaxillofac Radiol ; 41(4): 323-7, 2012 May.
Article in English | MEDLINE | ID: mdl-22517998

ABSTRACT

The aim was to compare patient discomfort during bitewing examination using five intra-oral receptors: a conventional film, a storage phosphor plate with a new soft cover, an already manufactured and sold sensor with a wire and two square and two rounded corners, a new version of a previously developed sensor with a wire and four square corners, and a newly developed sensor with a wire and four rounded corners. 60 patients participated in the study. The five receptors [a Kodak paper pack film (Eastman Kodak Company, Rochester, NY), a DIGORA® Optime phosphor plate (Soredex, Tuusula, Finland), and SuniRay (Suni Medical Imaging, Inc., San Jose, CA), DIGORA Toto (Soredex) and Snapshot (Instrumentarium Dental, Tuusula, Finland) complementary metal-oxide-semiconductors] with differences in ergonomic shape were placed in the mouth for a bitewing examination for approximately 10 s. The patients rated their discomfort on a 100 mm visual analogue scale after having had each receptor positioned. There was no significant difference in patient discomfort score between the conventional film and the Snapshot sensor (p > 0.05). Both conventional film and Snapshot were significantly less uncomfortable than the other receptors (p < 0.05). No significant difference was seen between the storage phosphor plate and the SuniRay sensor (p > 0.05). The storage phosphor plate was significantly less uncomfortable than the DIGORA Toto sensor (p < 0.05). There was no significant difference in the perception of discomfort between the conventional film and an ergonomically shaped wired sensor with rounded corners.


Subject(s)
Patient Satisfaction , Radiographic Image Enhancement/instrumentation , Radiography, Bitewing/adverse effects , Radiography, Bitewing/methods , X-Ray Intensifying Screens , Adult , Aged , Equipment Design , Facial Pain/etiology , Female , Humans , Male , Middle Aged , Pain Measurement , Semiconductors , X-Rays , Young Adult
3.
Gene ; 262(1-2): 51-9, 2001 Jan 10.
Article in English | MEDLINE | ID: mdl-11179667

ABSTRACT

Accurate segregation of sister chromatids during mitosis is necessary to avoid the aneuploidy found in many cancers. The spindle checkpoint, which monitors the metaphase to anaphase transition, has been shown to be defective in cancers with chromosomal instability. This checkpoint regulates the anaphase-promoting complex or cyclosome (APC/C), a cell cycle ubiquitin ligase regulating among other things sister chromatid separation. We have previously investigated the mouse Apc1 protein (previously also called Tsg24), the largest subunit of the APC/C. We have now sequenced a full-length human APC1 cDNA, mapped its chromosomal location, and analysed its intron-exon boundaries. We have also investigated the RNA and protein expression of the Apc1 and other APC/C components in normal and cancer cells and the relative occurrence of expressed sequence tags (ESTs) representing APC subunits from different tissues. The different APC/C subunits are expressed in most tissues and cell types at fairly constant levels relative to each other, suggesting that they perform their functions as part of a complex. A difference from this pattern is however seen for the APC6, which in some cases is more strongly expressed, suggesting a special function for this protein in certain tissues and cell types.


Subject(s)
Chromosomes, Human, Pair 2 , Ligases/genetics , Proteins/genetics , Ubiquitin-Protein Ligase Complexes , Amino Acid Sequence , Anaphase-Promoting Complex-Cyclosome , Apc1 Subunit, Anaphase-Promoting Complex-Cyclosome , Base Sequence , Cloning, Molecular , Exons , Expressed Sequence Tags , Gene Expression Regulation , Humans , Introns , Molecular Sequence Data , Sequence Analysis , Tumor Cells, Cultured , Ubiquitin-Protein Ligases
5.
Eur J Cell Biol ; 78(6): 382-90, 1999 Jun.
Article in English | MEDLINE | ID: mdl-10430019

ABSTRACT

We report the isolation and characterization of a murine gene encoding a conserved mammalian nucleolar protein. The protein, called Tsg118, has a predicted molecular mass of 59.4 kDa and a high content of basic amino acids. A homologous human gene was localized to chromosome 16p12.3. The Tsg118 protein is predominantly expressed in proliferating somatic cells and in male germ cells. Indirect immunofluorescence microscopy analysis using an affinity-purified anti-Tsg118 serum shows colocalization of Tsg118 and a known nucleolar protein, fibrillarin, to the dense fibrillar component of the nucleolus. The nucleolar localization of the Tsg118 protein appears to be temporally restricted to the interphase stages of the somatic cell cycle and to the meiotic phase of spermatogenesis. We find that the Tsg118 protein localizes to the nucleolus in both proliferating and serum-starved cells. Interestingly, as the nucleolar signal disappears in mitotic cells, the Tsg118 protein instead becomes associated with the surface of the condensed chromosomes.


Subject(s)
Mitosis , Nuclear Proteins/metabolism , Amino Acid Sequence , Animals , Base Sequence , Cell Division , Cell Nucleolus , Chromosomal Proteins, Non-Histone/metabolism , Chromosomes, Human, Pair 16 , DNA, Complementary , Humans , Male , Mice , Molecular Sequence Data , Nuclear Proteins/genetics , Rabbits , Spermatocytes/metabolism , Testis
6.
Mol Cell ; 1(3): 371-80, 1998 Feb.
Article in English | MEDLINE | ID: mdl-9660921

ABSTRACT

Ubiquitin-mediated proteolysis is the key to cell cycle control. Anaphase-promoting complex/cyclosome (APC) is a ubiquitin ligase that targets cyclin B and factors regulating sister chromatid separation for proteolysis by the proteasome and, consequently, regulates metaphase-anaphase transition and exit from mitosis. Here we report that Cdc2-cyclin B-activated Polo-like kinase (Plk) specifically phosphorylates at least three components of APC and activates APC to ubiquitinate cyclin B in the in vitro-reconstituted system. Conversely, protein kinase A (PKA) phosphorylates two subunits of APC but suppresses APC activity. PKA is superior to Plk in its regulation of APC, and Plk activity peaks whereas PKA activity is falling at metaphase. These results indicate that Plk and PKA regulate mitosis progression by controlling APC activity.


Subject(s)
Anaphase/physiology , Cyclic AMP-Dependent Protein Kinases/metabolism , Maturation-Promoting Factor/metabolism , Protein Kinases/metabolism , 3T3 Cells/cytology , 3T3 Cells/enzymology , Anaphase-Promoting Complex-Cyclosome , Animals , Apc6 Subunit, Anaphase-Promoting Complex-Cyclosome , Cell Cycle Proteins/metabolism , Electrophoresis , Enzyme Activation/physiology , Histidine , Mesothelin , Metaphase/physiology , Mice , Mitosis/physiology , Multienzyme Complexes/metabolism , Phosphorylation , Protein Serine-Threonine Kinases , Proteins/metabolism , Proto-Oncogene Proteins , Ubiquitin-Protein Ligase Complexes , Ubiquitins/metabolism , Polo-Like Kinase 1
7.
Mol Cell Biol ; 18(1): 468-76, 1998 Jan.
Article in English | MEDLINE | ID: mdl-9418894

ABSTRACT

Sister chromatids in early mitotic cells are held together mainly by interactions between centromeres. The separation of sister chromatids at the transition between the metaphase and the anaphase stages of mitosis depends on the anaphase-promoting complex (APC), a 20S ubiquitin-ligase complex that targets proteins for destruction. A subunit of the APC, called APC-alpha in Xenopus (and whose homologs are APC-1, Cut4, BIME, and Tsg24), has recently been identified and shown to be required for entry into anaphase. We now show that the mammalian APC-alpha homolog, Tsg24, is a centromere-associated protein. While this protein is detected only during the prophase to the anaphase stages of mitosis in Chinese hamster cells, it is constitutively associated with the centromeres in murine cells. We show that there are two forms of this protein in mammalian cells, a soluble form associated with other components of the APC and a centromere-bound form. We also show that both the Tsg24 protein and the Cdc27 protein, another APC component, are bound to isolated mitotic chromosomes. These results therefore support a model in which the APC by ubiquitination of a centromere protein regulates the sister chromatid separation process.


Subject(s)
Anaphase/genetics , Centromere/genetics , Gene Expression Regulation , Proteins/genetics , Anaphase-Promoting Complex-Cyclosome , Animals , CHO Cells , Centromere/metabolism , Cricetinae , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Proteins/metabolism , Ubiquitin-Protein Ligase Complexes , Xenopus
8.
Clin Ther ; 9(2): 167-73, 1987.
Article in English | MEDLINE | ID: mdl-3568062

ABSTRACT

In a prospective, observer-blind study, the authors assessed the efficacy of cefotaxime (2 gm IV) as auxiliary therapy to the currently used antimicrobial prophylaxis in transurethral prostatectomy. Cefotaxime was administered to 48 patients. From these, 188 blood specimens were drawn and eight blood cultures from eight patients were positive. From an untreated control group of 50 patients 196 specimens were drawn. Thirty-one of these specimens (from 17 patients) were positive (P less than 0.05). This significant reduction was due mainly to fewer pathogen isolates (1 versus 16). The number of postoperative complications was reduced from 21 in 15 patients to 12 in 10 patients (P less than 0.05). It is concluded that a single IV dose of 2 gm of cefotaxime protects against the immediate perioperative complications.


Subject(s)
Cefotaxime/administration & dosage , Postoperative Complications/prevention & control , Premedication , Prostatectomy , Aged , Aged, 80 and over , Bacteriuria/prevention & control , Drug Evaluation , Humans , Male , Middle Aged , Prospective Studies , Random Allocation , Sepsis/prevention & control
9.
Scand J Urol Nephrol ; 19(2): 105-7, 1985.
Article in English | MEDLINE | ID: mdl-3903978

ABSTRACT

By transabdominal ultrasonic scanning of the filled bladder it is possible to examine the surface of the bladder urothelium in the outpatient clinic. In a "blind" study of 129 patients controlled for recurrences of urinary bladder tumours the results of dynamic transabdominal ultrasonography were compared with the results of cystoscopy. The ultrasound could identify the recurrences of 5 mm or above in size significantly. Below 5 mm in dimension, when positioned in the dome of the bladder or at severe trabeculation the ultrasonic scanning lead to a misdiagnosis. No invasive recurrences were overlooked by ultrasonography. We will advocate that transabdominal ultrasonic scanning replace routine cystoscopy in low-risk patients with superficial bladder tumours of the Ta category and a low grade after the primary transurethral treatment and no or few recurrences of the same Ta category at the first control cystoscopy. On the other hand we will recommend to continue cystoscopy of patients with frequently recurring urinary bladder tumours, the high grade Ta tumours, carcinoma in situ because of the risk of invasive growth, and patients with primary invasive tumours including those with the superficial invasion (category T1).


Subject(s)
Neoplasm Recurrence, Local/diagnosis , Ultrasonography , Urinary Bladder Neoplasms/diagnosis , Adult , Aged , Cystoscopy , Female , Humans , Male , Middle Aged
10.
Acta Chir Scand ; 149(5): 517-20, 1983.
Article in English | MEDLINE | ID: mdl-6356732

ABSTRACT

A prospective, controlled trial of antibiotic therapy was carried out in 90 patients with perforated appendicitis. One randomly selected group received systemic metronidazole, started peroperatively, plus locally instilled ampicillin. The other group, also randomly selected, received only local ampicillin. There was no statistically significant difference in the overall frequency of postoperative septic complications (wound infection or intra-abdominal abscess) between the two groups, but wound infections were significantly fewer in the patients given metronidazole. There was no intergroup difference in hospitalization time. Treatment with systemic metronidazole and local ampicillin is recommended in patients operated on for perforated appendicitis.


Subject(s)
Ampicillin/therapeutic use , Appendectomy/adverse effects , Appendicitis/surgery , Intestinal Perforation/surgery , Metronidazole/therapeutic use , Sepsis/prevention & control , Surgical Wound Infection/prevention & control , Adolescent , Adult , Aged , Child , Child, Preschool , Clinical Trials as Topic , Drug Therapy, Combination , Humans , Intraoperative Care , Middle Aged , Prospective Studies
13.
Acta Chir Scand ; 143(1): 53-6, 1977.
Article in English | MEDLINE | ID: mdl-855623

ABSTRACT

Different techniques of proximal gastric vagotomy were used from 1970 to 75 in 267 patients with duodenal ulcer. A 1-4 years clinical follow-up showed an unacceptable high rate of recurrent ulcer (23-24%) in patients having skeletonization of the lower 2 cm of the esophagus, regardless of the extent of preserved antral innervation (6-9 cm). Extension of the esophageal dissection resulted in a lower recurrence rate (8%) and a higher frequency of complete vagotomies as expressed by the average acid response to insulin. No constant relationships were found between reductions of basal acid output and peak acid output to histamine 10 days after proximal gastric vagotomy and the risk of recurrent ulcer.


Subject(s)
Duodenal Ulcer/surgery , Gastric Juice/metabolism , Vagotomy/methods , Duodenal Ulcer/physiopathology , Esophagus/surgery , Female , Follow-Up Studies , Histamine , Humans , Insulin , Male , Recurrence
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