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1.
Cell Rep ; 14(8): 1841-9, 2016 Mar 01.
Article in English | MEDLINE | ID: mdl-26904945

ABSTRACT

Cilia are microtubule-based projections that function in the movement of extracellular fluid. This requires cilia to be: (1) motile and driven by dynein complexes and (2) correctly polarized on the surface of cells, which requires planar cell polarity (PCP). Few factors that regulate both processes have been discovered. We reveal that C21orf59/Kurly (Kur), a cytoplasmic protein with some enrichment at the base of cilia, is needed for motility; zebrafish mutants exhibit characteristic developmental abnormalities and dynein arm defects. kur was also required for proper cilia polarization in the zebrafish kidney and the larval skin of Xenopus laevis. CRISPR/Cas9 coupled with homologous recombination to disrupt the endogenous kur locus in Xenopus resulted in the asymmetric localization of the PCP protein Prickle2 being lost in mutant multiciliated cells. Kur also makes interactions with other PCP components, including Disheveled. This supports a model wherein Kur plays a dual role in cilia motility and polarization.


Subject(s)
LIM Domain Proteins/genetics , Microtubules/metabolism , Xenopus laevis/genetics , Zebrafish Proteins/genetics , Zebrafish/genetics , Animals , Binding Sites , CRISPR-Cas Systems , Cell Movement , Cell Polarity , Cilia/metabolism , Dishevelled Proteins/genetics , Dishevelled Proteins/metabolism , Embryo, Nonmammalian , Gene Expression , Genetic Loci , Homologous Recombination , Kidney/cytology , Kidney/growth & development , Kidney/metabolism , LIM Domain Proteins/metabolism , Larva/genetics , Larva/growth & development , Larva/metabolism , Membrane Proteins , Microtubules/ultrastructure , Mutation , Protein Binding , Signal Transduction , Skin/cytology , Skin/growth & development , Skin/metabolism , Xenopus Proteins/genetics , Xenopus Proteins/metabolism , Xenopus laevis/embryology , Xenopus laevis/metabolism , Zebrafish/embryology , Zebrafish/metabolism , Zebrafish Proteins/metabolism
2.
J Cell Biol ; 198(5): 799-813, 2012 Sep 03.
Article in English | MEDLINE | ID: mdl-22927467

ABSTRACT

A growing number of transcriptional regulatory proteins are known to be modified by the small ubiquitin-like protein, SUMO. Posttranslational modification by SUMO may be one means by which transcriptional regulatory factors that play context-dependent roles in multiple processes can be regulated such that they direct the appropriate cellular and developmental outcomes. In early vertebrate embryos, SUMOylation of SoxE transcription factors profoundly affects their function, inhibiting their neural crest-inducing activity and promoting ear formation. In this paper, we provide mechanistic insight into how SUMO modification modulates SoxE function. We show that SUMOylation dramatically altered recruitment of transcriptional coregulator factors by SoxE proteins, displacing coactivators CREB-binding protein/p300 while promoting the recruitment of a corepressor, Grg4. These data demonstrate that SoxE proteins can function as transcriptional repressors in a SUMO-dependent manner. They further suggest a novel multivalent mechanism for SUMO-mediated recruitment of transcriptional coregulatory factors.


Subject(s)
Neural Crest/metabolism , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Repressor Proteins/genetics , Repressor Proteins/metabolism , SOXE Transcription Factors/genetics , SOXE Transcription Factors/metabolism , Sumoylation/genetics , CREB-Binding Protein/genetics , CREB-Binding Protein/metabolism , Cell Line, Tumor , Histone Deacetylases/genetics , Histone Deacetylases/metabolism , Humans , Intramolecular Oxidoreductases/genetics , Intramolecular Oxidoreductases/metabolism , Microphthalmia-Associated Transcription Factor/genetics , Microphthalmia-Associated Transcription Factor/metabolism , Promoter Regions, Genetic/genetics , SOX9 Transcription Factor/genetics , SOX9 Transcription Factor/metabolism , SUMO-1 Protein/genetics , SUMO-1 Protein/metabolism , Transcription, Genetic , Transcriptional Activation/genetics
3.
PLoS Genet ; 7(4): e1001361, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21490950

ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD) is characterized by formation of renal cysts that destroy the kidney. Mutations in PKD1 and PKD2, encoding polycystins-1 and -2, cause ADPKD. Polycystins are thought to function in primary cilia, but it is not well understood how these and other proteins are targeted to cilia. Here, we provide the first genetic and biochemical link between polycystins and the exocyst, a highly-conserved eight-protein membrane trafficking complex. We show that knockdown of exocyst component Sec10 yields cellular phenotypes associated with ADPKD, including loss of flow-generated calcium increases, hyperproliferation, and abnormal activation of MAPK. Sec10 knockdown in zebrafish phenocopies many aspects of polycystin-2 knockdown-including curly tail up, left-right patterning defects, glomerular expansion, and MAPK activation-suggesting that the exocyst is required for pkd2 function in vivo. We observe a synergistic genetic interaction between zebrafish sec10 and pkd2 for many of these cilia-related phenotypes. Importantly, we demonstrate a biochemical interaction between Sec10 and the ciliary proteins polycystin-2, IFT88, and IFT20 and co-localization of the exocyst and polycystin-2 at the primary cilium. Our work supports a model in which the exocyst is required for the ciliary localization of polycystin-2, thus allowing for polycystin-2 function in cellular processes.


Subject(s)
Phenotype , Polycystic Kidney Diseases/genetics , Polycystic Kidney Diseases/metabolism , TRPP Cation Channels/metabolism , Vesicular Transport Proteins/metabolism , Zebrafish Proteins/metabolism , Animals , Carrier Proteins/metabolism , Cell Line , Cilia/genetics , Cilia/metabolism , Dogs , Enzyme Activation/genetics , Gene Expression Regulation, Developmental , Gene Knockdown Techniques , HEK293 Cells , Humans , Kidney/embryology , Kidney/pathology , Mice , Mitogen-Activated Protein Kinase Kinases/metabolism , Models, Biological , Polycystic Kidney Diseases/pathology , Protein Binding , TRPP Cation Channels/deficiency , Tumor Suppressor Proteins/metabolism , Vesicular Transport Proteins/genetics , Zebrafish , Zebrafish Proteins/genetics
4.
Methods Cell Biol ; 97: 415-35, 2010.
Article in English | MEDLINE | ID: mdl-20719283

ABSTRACT

Research focused on cilia as extremely important cellular organelles has flourished in recent years. A thorough understanding of cilia regulation and function is critical, as disruptions of cilia structure and/or function have been linked to numerous human diseases and disorders. The tropical freshwater zebrafish is an excellent model organism in which to study cilia structure and function. We can readily image cilia and their motility in embryonic structures including Kupffer's vesicle during somite stages and the pronephros from 1 day postfertilization onward. Here, we describe how to image cilia by whole-mount immunofluorescence, transverse cryosection/immunohistochemistry, and transmission electron microscopy. We also describe how to obtain videos of cilia motility in living embryos.


Subject(s)
Cilia/ultrastructure , Microscopy/methods , Zebrafish , Animals , Cilia/chemistry , Cilia/metabolism , Cilia/physiology , Cryoultramicrotomy/methods , Embryo, Nonmammalian , Humans , Models, Biological , Movement/physiology , Zebrafish/embryology , Zebrafish/physiology
6.
Development ; 136(10): 1621-31, 2009 May.
Article in English | MEDLINE | ID: mdl-19395640

ABSTRACT

Cilia defects have been implicated in a variety of human diseases and genetic disorders, but how cilia motility contributes to these phenotypes is still unknown. To further our understanding of how cilia function in development, we have cloned and characterized two alleles of seahorse, a zebrafish mutation that results in pronephric cysts. seahorse encodes Lrrc6l, a leucine-rich repeat-containing protein that is highly conserved in organisms that have motile cilia. seahorse is expressed in zebrafish tissues known to contain motile cilia. Although mutants do not affect cilia structure and retain the ability to interact with Disheveled, both alleles of seahorse strongly affect cilia motility in the zebrafish pronephros and neural tube. Intriguingly, although seahorse mutations variably affect fluid flow in Kupffer's vesicle, they can have very weak effects on left-right patterning. Combined with recently published results, our alleles suggest that the function of seahorse in cilia motility is separable from its function in other cilia-related phenotypes.


Subject(s)
Neural Tube/embryology , Zebrafish Proteins/physiology , Zebrafish/embryology , Amino Acid Sequence , Animals , Body Patterning/physiology , Cilia/physiology , Molecular Sequence Data , Mutation , Neural Tube/physiology , Zebrafish/physiology , Zebrafish Proteins/genetics
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