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1.
ACS Sens ; 7(1): 159-165, 2022 01 28.
Article in English | MEDLINE | ID: mdl-35006683

ABSTRACT

We developed an integrated microfluidic cellular processing unit (mCPU) capable of autonomously isolating single cells and performing measurements and on-the-fly analysis of cell-surface dissociation rates, followed by recovery of selected cells. We performed proof-of-concept, high-throughput single-cell experiments characterizing pMHC-TCR interactions on live CD8+ T cells. The mCPU platform analyzed TCR-pMHC dissociation rates with a throughput of 50 cells per hour and hundreds of cells per run, and we demonstrate that cells can be selected, enriched, and easily recovered from the device.


Subject(s)
Microfluidics , Receptors, Antigen, T-Cell , CD8-Positive T-Lymphocytes , Protein Binding
2.
J Vis Exp ; (155)2020 01 30.
Article in English | MEDLINE | ID: mdl-32065151

ABSTRACT

Plant adaptation to biotic and abiotic stresses is governed by a variety of factors, among which the regulation of stomatal aperture in response to water deficit or pathogens plays a crucial role. Identifying small molecules that regulate stomatal movement can therefore contribute to understanding the physiological basis by which plants adapt to their environment. Large-scale screening approaches that have been used to identify regulators of stomatal movement have potential limitations: some rely heavily on the abscisic acid (ABA) hormone signaling pathway, therefore excluding ABA-independent mechanisms, while others rely on the observation of indirect, long-term physiological effects such as plant growth and development. The screening method presented here allows the large-scale treatment of plants with a library of chemicals coupled with a direct quantification of their transpiration by thermal imaging. Since evaporation of water through transpiration results in leaf surface cooling, thermal imaging provides a non-invasive approach to investigate changes in stomatal conductance over time. In this protocol, Helianthus annuus seedlings are grown hydroponically and then treated by root feeding, in which the primary root is cut and dipped into the chemical being tested. Thermal imaging followed by statistical analysis of cotyledonary temperature changes over time allows for the identification of bioactive molecules modulating stomatal aperture. Our proof-of-concept experiments demonstrate that a chemical can be carried from the cut root to the cotyledon of the sunflower seedling within 10 minutes. In addition, when plants are treated with ABA as a positive control, an increase in leaf surface temperature can be detected within minutes. Our method thus allows the efficient and rapid identification of novel molecules regulating stomatal aperture.


Subject(s)
Helianthus/physiology , Imaging, Three-Dimensional , Plant Transpiration/physiology , Temperature , Data Analysis , Plant Leaves/physiology , Plant Roots/physiology , Plant Stomata/physiology , Seedlings/physiology , Water/metabolism
3.
Microsyst Nanoeng ; 6: 45, 2020.
Article in English | MEDLINE | ID: mdl-34567657

ABSTRACT

The immune system is a complex network of specialized cells that work in concert to protect against invading pathogens and tissue damage. Imbalances in this network often result in excessive or absent immune responses leading to allergies, autoimmune diseases, and cancer. Many of the mechanisms and their regulation remain poorly understood. Immune cells are highly diverse, and an immune response is the result of a large number of molecular and cellular interactions both in time and space. Conventional bulk methods are often prone to miss important details by returning population-averaged results. There is a need in immunology to measure single cells and to study the dynamic interplay of immune cells with their environment. Advances in the fields of microsystems and microengineering gave rise to the field of microfluidics and its application to biology. Microfluidic systems enable the precise control of small volumes in the femto- to nanoliter range. By controlling device geometries, surface chemistry, and flow behavior, microfluidics can create a precisely defined microenvironment for single-cell studies with spatio-temporal control. These features are highly desirable for single-cell analysis and have made microfluidic devices useful tools for studying complex immune systems. In addition, microfluidic devices can achieve high-throughput measurements, enabling in-depth studies of complex systems. Microfluidics has been used in a large panel of biological applications, ranging from single-cell genomics, cell signaling and dynamics to cell-cell interaction and cell migration studies. In this review, we give an overview of state-of-the-art microfluidic techniques, their application to single-cell immunology, their advantages and drawbacks, and provide an outlook for the future of single-cell technologies in research and medicine.

4.
PLoS One ; 14(6): e0218605, 2019.
Article in English | MEDLINE | ID: mdl-31233537

ABSTRACT

The integration of conflicting signals in response to environmental constraints is essential to efficient plant growth and development. The light-dependent and the stress hormone abscisic acid (ABA)-dependent signaling pathways play opposite roles in many aspects of plant development. While these pathways have been extensively studied, the complex nature of their molecular dialogue is still obscure. When mobilized by the Arabidopsis thaliana ß-glucosidase 1 (AtBG1), the glucose ester-conjugated inactive form of ABA has proven to be a source of the active hormone that is essential for the adaptation of the plant to water deficit, as evidenced by the impaired stomatal closure of atbg1 mutants in response to water stress. In a suppressor screen designed to identify the molecular components of AtBG1-associated physiological and developmental mechanisms, we identified the mutation variant of AtBG1 traits (vat1), a new mutant allele of the red light/far-red light photoreceptor PHYTOCHROME B (PHYB). Our study reveals that atbg1 plants harbor increased stomatal density in addition to impaired stomatal closure. We also provide evidence that the vat1/phyb mutation can restore the apparent transpiration of the atbg1 mutant by decreasing stomatal aperture and restoring a stomatal density similar to wild-type plants. Expression of key regulators of stomatal development showed a crosstalk between AtBG1-mediated ABA signaling and PHYB-mediated stomatal development. We conclude that the AtBG1-dependent regulation of ABA homeostasis and the PHYB-mediated light signaling pathways act antagonistically in the control of stomatal development.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Phytochrome B/metabolism , beta-Glucosidase/metabolism , Abscisic Acid/analogs & derivatives , Abscisic Acid/metabolism , Acclimatization/genetics , Acclimatization/physiology , Amino Acid Sequence , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis Proteins/chemistry , Arabidopsis Proteins/genetics , Droughts , Gene Expression Regulation, Developmental , Gene Expression Regulation, Plant , Genes, Plant , Light , Models, Molecular , Mutation , Phytochrome B/chemistry , Phytochrome B/genetics , Plant Stomata/growth & development , Plant Stomata/metabolism , Protein Domains , Sequence Homology, Amino Acid , Signal Transduction , beta-Glucosidase/genetics
5.
Biosci Biotechnol Biochem ; 81(7): 1394-1400, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28387156

ABSTRACT

Salicylic acid (SA) induces stomatal closure sharing several components with abscisic acid (ABA) and methyl jasmonate (MeJA) signaling. We have previously shown that two guard cell-preferential mitogen-activated protein kinases (MAPKs), MPK9 and MPK12, positively regulate ABA signaling and MeJA signaling in Arabidopsis thaliana. In this study, we examined whether these two MAPKs are involved in SA-induced stomatal closure using genetic mutants and a pharmacological, MAPKK inhibitor. Salicylic acid induced stomatal closure in mpk9 and mpk12 single mutants but not in mpk9 mpk12 double mutants. The MAPKK inhibitor PD98059 inhibited SA-induced stomatal closure in wild-type plants. Salicylic acid induced extracellular reactive oxygen species (ROS) production, intracellular ROS accumulation, and cytosolic alkalization in the mpk9, mpk12, and mpk9 mpk12 mutants. Moreover, SA-activated S-type anion channels in guard cells of wild-type plants but not in guard cells of mpk9 mpk12 double mutants. These results imply that MPK9 and MPK12 are positive regulators of SA signaling in Arabidopsis guard cells.


Subject(s)
Arabidopsis/drug effects , Gene Expression Regulation, Plant , Plant Stomata/drug effects , Salicylic Acid/pharmacology , Abscisic Acid/metabolism , Abscisic Acid/pharmacology , Acetates/metabolism , Acetates/pharmacology , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Cyclopentanes/metabolism , Cyclopentanes/pharmacology , Flavonoids/pharmacology , Hydrogen-Ion Concentration , Membrane Potentials/drug effects , Mitogen-Activated Protein Kinases/genetics , Mitogen-Activated Protein Kinases/metabolism , Mutation , Oxylipins/metabolism , Oxylipins/pharmacology , Plant Growth Regulators/metabolism , Plant Growth Regulators/pharmacology , Plant Stomata/genetics , Plant Stomata/metabolism , Protein Kinase Inhibitors/pharmacology , Reactive Oxygen Species/agonists , Reactive Oxygen Species/metabolism , Salicylic Acid/metabolism , Signal Transduction , Voltage-Dependent Anion Channels/genetics , Voltage-Dependent Anion Channels/metabolism
6.
Neurobiol Aging ; 51: 83-96, 2017 03.
Article in English | MEDLINE | ID: mdl-28056358

ABSTRACT

The impact of human adult ischemia-tolerant mesenchymal stem cells (hMSCs) and factors (stem cell factors) on cerebral amyloid beta (Aß) pathology was investigated in a mouse model of Alzheimer's disease (AD). To this end, hMSCs were administered intravenously to APPPS1 transgenic mice that normally develop cerebral Aß. Quantitative reverse transcriptase polymerase chain reaction biodistribution revealed that intravenously delivered hMSCs were readily detected in APPPS1 brains 1 hour following administration, and dropped to negligible levels after 1 week. Notably, intravenously injected hMSCs that migrated to the brain region were localized in the cerebrovasculature, but they also could be observed in the brain parenchyma particularly in the hippocampus, as revealed by immunohistochemistry. A single hMSC injection markedly reduced soluble cerebral Aß levels in APPPS1 mice after 1 week, although increasing several Aß-degrading enzymes and modulating a panel of cerebral cytokines, suggesting an amyloid-degrading and anti-inflammatory impact of hMSCs. Furthermore, 10 weeks of hMSC treatment significantly reduced cerebral Aß plaques and neuroinflammation in APPPS1 mice, without increasing cerebral amyloid angiopathy or microhemorrhages. Notably, a repeated intranasal delivery of soluble factors secreted by hMSCs in culture, in the absence of intravenous hMSC injection, was also sufficient to diminish cerebral amyloidosis in the mice. In conclusion, this preclinical study strongly underlines that cerebral amyloidosis is amenable to therapeutic intervention based on peripheral applications of hMSC or hMSC factors, paving the way for a novel therapy for Aß amyloidosis and associated pathologies observed in AD.


Subject(s)
Alzheimer Disease/etiology , Alzheimer Disease/therapy , Amyloid beta-Peptides/metabolism , Brain/metabolism , Mesenchymal Stem Cell Transplantation/methods , Molecular Targeted Therapy , Animals , Cell Movement , Cells, Cultured , Cytokines/metabolism , Disease Models, Animal , Hippocampus/metabolism , Humans , Inflammation Mediators/metabolism , Injections, Intravenous , Mice, Transgenic
7.
Cancer Res ; 76(2): 472-9, 2016 Jan 15.
Article in English | MEDLINE | ID: mdl-26554829

ABSTRACT

The programmed cell death ligand 1 (PD-L1) participates in an immune checkpoint system involved in preventing autoimmunity. PD-L1 is expressed on tumor cells, tumor-associated macrophages, and other cells in the tumor microenvironment. Anti-PD-L1 antibodies are active against a variety of cancers, and combined anti-PD-L1 therapy with external beam radiotherapy has been shown to increase therapeutic efficacy. PD-L1 expression status is an important indicator of prognosis and therapy responsiveness, but methods to precisely capture the dynamics of PD-L1 expression in the tumor microenvironment are still limited. In this study, we developed a murine anti-PD-L1 antibody conjugated to the radionuclide Indium-111 ((111)In) for imaging and biodistribution studies in an immune-intact mouse model of breast cancer. The distribution of (111)In-DTPA-anti-PD-L1 in tumors as well as the spleen, liver, thymus, heart, and lungs peaked 72 hours after injection. Coinjection of labeled and 100-fold unlabeled antibody significantly reduced spleen uptake at 24 hours, indicating that an excess of unlabeled antibody effectively blocked PD-L1 sites in the spleen, thus shifting the concentration of (111)In-DTPA-anti-PD-L1 into the blood stream and potentially increasing tumor uptake. Clearance of (111)In-DTPA-anti-PD-L1 from all organs occurred at 144 hours. Moreover, dosimetry calculations revealed that radionuclide-labeled anti-PD-L1 antibody yielded tolerable projected marrow doses, further supporting its use for radiopharmaceutical therapy. Taken together, these studies demonstrate the feasibility of using anti-PD-L1 antibody for radionuclide imaging and radioimmunotherapy and highlight a new opportunity to optimize and monitor the efficacy of immune checkpoint inhibition therapy.


Subject(s)
Breast Neoplasms/immunology , Programmed Cell Death 1 Receptor/genetics , Programmed Cell Death 1 Receptor/immunology , Animals , Breast Neoplasms/genetics , Breast Neoplasms/pathology , Disease Models, Animal , Female , Humans , Male , Mice , Prognosis , Radiotherapy Planning, Computer-Assisted , Tumor Microenvironment
8.
Plant J ; 79(2): 322-33, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24891222

ABSTRACT

Faced with declining soil-water potential, plants synthesize abscisic acid (ABA), which then triggers stomatal closure to conserve tissue moisture. Closed stomates, however, also create several physiological dilemmas. Among these, the large CO2 influx required for net photosynthesis will be disrupted. Depleting CO2 in the plant will in turn bias stomatal opening by suppressing ABA sensitivity, which then aggravates transpiration further. We have investigated the molecular basis of how C3 plants resolve this H2 O-CO2 conflicting priority created by stomatal closure. Here, we have identified in Arabidopsis thaliana an early drought-induced spermidine spermine-N(1) -acetyltransferase homolog, which can slow ABA-mediated stomatal closure. Evidence from genetic, biochemical and physiological analyses has revealed that this protein does so by acetylating the metabolite 1,3-diaminopropane (DAP), thereby turning on the latter's intrinsic activity. Acetylated DAP triggers plasma membrane electrical and ion transport properties in an opposite way to those by ABA. Thus in adapting to low soil-water availability, acetyl-DAP could refrain stomates from complete closure to sustain CO2 diffusion to photosynthetic tissues.


Subject(s)
Abscisic Acid/metabolism , Arabidopsis/metabolism , Diamines/metabolism , Droughts , Plant Stomata/metabolism , Arabidopsis Proteins/metabolism , Gene Expression Regulation, Plant , Signal Transduction
10.
Plant Physiol ; 160(1): 556-68, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22829319

ABSTRACT

AtPUB18 and AtPUB19 are homologous U-box E3 ubiquitin ligases in Arabidopsis (Arabidopsis thaliana). AtPUB19 is a negative regulator of abscisic acid (ABA)-mediated drought responses, whereas the role of AtPUB18 in drought responses is unknown. Here, loss-of-function and overexpression tests identified AtPUB18 as a negative regulator in ABA-mediated stomatal closure and water stress responses. The atpub18-2atpub19-3 double mutant line displayed more sensitivity to ABA and enhanced drought tolerance than each single mutant plant; therefore, AtPUB18 and AtPUB19 are agonistic. Stomatal closure of the atpub18-2atpub19-3 mutant was hypersensitive to hydrogen peroxide (H(2)O(2)) but not to calcium, suggesting that AtPUB18 and AtPUB19 exert negative effects on the ABA signaling pathway downstream of H(2)O(2) and upstream of calcium. AtPUB22 and AtPUB23 are other U-box E3 negative regulators of drought responses. Although atpub22atpub23 was more tolerant to drought stress relative to wild-type plants, its ABA-mediated stomatal movements were highly similar to those of wild-type plants. The atpub18-2atpub19-3atpub22atpub23 quadruple mutant exhibited enhanced tolerance to drought stress as compared with each atpub18-2atpub19-3 and atpub22atpub23 double mutant progeny; however, its stomatal behavior was almost identical to the atpub18-2atpub19-3 double mutant in the presence of ABA, H(2)O(2), and calcium. Overexpression of AtPUB18 and AtPUB19 in atpub22atpub23 effectively hindered ABA-dependent stomatal closure, but overexpression of AtPUB22 and AtPUB23 in atpub18-2atpub19-3 did not inhibit ABA-enhanced stomatal closure, highlighting their ABA-independent roles. Overall, these results suggest that AtPUB18 has a linked function with AtPUB19, but is independent from AtPUB22 and AtPUB23, in negative regulation of ABA-mediated drought stress responses.


Subject(s)
Abscisic Acid/pharmacology , Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Droughts , Stress, Physiological , Ubiquitin-Protein Ligases/metabolism , Abscisic Acid/metabolism , Adaptation, Physiological , Amino Acid Sequence , Arabidopsis/drug effects , Arabidopsis/genetics , Arabidopsis/physiology , Arabidopsis Proteins/genetics , Calcium/metabolism , Chlorophyll/analysis , Gene Expression Regulation, Plant , Genes, Plant , Genetic Complementation Test/methods , Hydrogen Peroxide/pharmacology , Mannitol/pharmacology , Molecular Sequence Data , Phenotype , Plant Roots/drug effects , Plant Roots/metabolism , Plant Roots/physiology , Plant Stomata/metabolism , Plant Stomata/physiology , Plants, Genetically Modified/enzymology , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Plants, Genetically Modified/physiology , Signal Transduction , Ubiquitin-Protein Ligases/genetics
11.
Plant Signal Behav ; 6(11): 1875-7, 2011 Nov.
Article in English | MEDLINE | ID: mdl-22067989

ABSTRACT

Abscisic acid (ABA) plays a major role in plant development and adaptation to severe environmental conditions. ABA evokes cellular events to regulate stomatal apertures and thus contributes to the plant's ability to respond to abiotic stresses. Reactive oxygen species (ROS) are produced in response to ABA and mediate ABA-induced stomatal closure. We have shown that two MAP kinases, MPK9 and MPK12, are highly and preferentially expressed in guard cells and function as positive regulators of ROS-mediated ABA signaling in guard cells. Cell biological and electrophysiological analyses demonstrated that MPK9 and MPK12 act downstream of ROS and cytosolic Ca2+ and upstream of anion channels in the guard cell ABA signaling cascade. Plant pathogens use stomata as the primary gateway to enter into their hosts, and previous studies have indicated crosstalk between ABA and defense signaling. Here we show that mpk9-1/12-1 double mutants are highly susceptible to Pseudomonas syringae DC3000 compared to WT plants. These results suggest that the regulation of stomatal apertures by MPK9 and MPK12 contributes to the first line of defense against pathogens.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/genetics , Mitogen-Activated Protein Kinases/metabolism , Plant Stomata/enzymology , Stress, Physiological , Abscisic Acid/physiology , Arabidopsis/physiology , Arabidopsis Proteins/genetics , Calcium/metabolism , Gene Expression Regulation, Plant , Mitogen-Activated Protein Kinases/genetics , Mutation , Pseudomonas syringae/pathogenicity , Reactive Oxygen Species/metabolism , Signal Transduction
12.
FEBS J ; 278(22): 4262-76, 2011 Nov.
Article in English | MEDLINE | ID: mdl-21955583

ABSTRACT

Calcium signal transduction is a central mechanism by which plants sense and respond to endogenous and environmental stimuli. Cytosolic Ca(2+) elevation is achieved via two cellular pathways, Ca(2+) influx through Ca(2+) channels in the plasma membrane and Ca(2+) release from intracellular Ca(2+) stores. Because of the significance of Ca(2+) channels in cellular signaling, interaction with the environment and developmental processes in plants, a great deal of effort has been invested in recent years with regard to these important membrane proteins. Because of limited space, in this review we focus on recent findings giving insight into both the molecular identity and physiological function of channels that have been suggested to be responsible for the elevation in cytosolic Ca(2+) level, including cyclic nucleotide gated channels, glutamate receptor homologs, two-pore channels and mechanosensitive Ca(2+) -permeable channels. We provide an overview of the regulation of these Ca(2+) channels and their physiological roles and discuss remaining questions.


Subject(s)
Calcium Channels/metabolism , Calcium Signaling , Calcium/metabolism , Plant Cells/metabolism
13.
Plant Cell ; 22(5): 1575-91, 2010 May.
Article in English | MEDLINE | ID: mdl-20484005

ABSTRACT

Tudor-SN (TSN) copurifies with the RNA-induced silencing complex in animal cells where, among other functions, it is thought to act on mRNA stability via the degradation of specific dsRNA templates. In plants, TSN has been identified biochemically as a cytoskeleton-associated RNA binding activity. In eukaryotes, it has recently been identified as a conserved primary target of programmed cell death-associated proteolysis. We have investigated the physiological role of TSN by isolating null mutations for two homologous genes in Arabidopsis thaliana. The double mutant tsn1 tsn2 displays only mild growth phenotypes under nonstress conditions, but germination, growth, and survival are severely affected under high salinity stress. Either TSN1 or TSN2 alone can complement the double mutant, indicating their functional redundancy. TSN accumulates heterogeneously in the cytosol and relocates transiently to a diffuse pattern in response to salt stress. Unexpectedly, stress-regulated mRNAs encoding secreted proteins are significantly enriched among the transcripts that are underrepresented in tsn1 tsn2. Our data also reveal that TSN is important for RNA stability of its targets. These findings show that TSN is essential for stress tolerance in plants and implicate TSN in new, potentially conserved mechanisms acting on mRNAs entering the secretory pathway.


Subject(s)
Adaptation, Physiological/genetics , Arabidopsis Proteins/metabolism , Arabidopsis/genetics , Gene Expression Regulation, Plant , RNA Stability/genetics , RNA-Binding Proteins/metabolism , Stress, Physiological/genetics , Adaptation, Physiological/drug effects , Arabidopsis/cytology , Arabidopsis/drug effects , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Cytoplasm/drug effects , Cytoplasm/metabolism , Gene Expression Profiling , Gene Expression Regulation, Plant/drug effects , Genes, Plant/genetics , Genetic Complementation Test , Molecular Sequence Data , Mutation/genetics , Plant Roots/cytology , Plant Roots/drug effects , Plant Roots/genetics , Plant Roots/growth & development , Protein Transport/drug effects , RNA Stability/drug effects , RNA, Messenger/genetics , RNA, Messenger/metabolism , RNA-Binding Proteins/genetics , RNA-Induced Silencing Complex/metabolism , Seeds/drug effects , Seeds/genetics , Sodium Chloride/pharmacology , Soil , Stress, Physiological/drug effects
14.
J Biol Chem ; 285(16): 12071-7, 2010 Apr 16.
Article in English | MEDLINE | ID: mdl-20164192

ABSTRACT

Arabidopsis thaliana sucrose nonfermenting 1-related protein kinase 1 complexes belong to the SNF1/AMPK/SnRK1 protein kinase family that shares an ancestral function as central regulators of metabolism. In A. thaliana, the products of AtSnAK1 and AtSnAK2, orthologous to yeast genes, have been shown to autophosphorylate and to phosphorylate/activate the AtSnRK1.1 catalytic subunit on Thr(175). The phosphorylation of these kinases has been investigated by site-directed mutagenesis and tandem mass spectrometry. The autophosphorylation site of AtSnAK2 was identified as Thr(154), and it was shown to be required for AtSnAK catalytic activity. Interestingly, activated AtSnRK1 exerted a negative feedback phosphorylation on AtSnAK2 at Ser(261) (Ser(260) of AtSnAK1) that was dependent on AtSnAK autophosphorylation. The dynamics of these reciprocal phosphorylation events on the different kinases was established, and structural modeling allowed clarification of the topography of the AtSnAK phosphorylation sites. A mechanism is proposed to explain the observed changes in the enzymatic properties of each kinase triggered by these phosphorylation events.


Subject(s)
Arabidopsis Proteins/chemistry , Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Protein Serine-Threonine Kinases/chemistry , Protein Serine-Threonine Kinases/metabolism , Amino Acid Substitution , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Binding Sites/genetics , Enzyme Activation , Feedback, Physiological , Models, Molecular , Mutagenesis, Site-Directed , Phosphorylation , Protein Conformation , Protein Kinases/chemistry , Protein Kinases/genetics , Protein Kinases/metabolism , Protein Serine-Threonine Kinases/genetics , Protein Subunits , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sucrose/metabolism , Tandem Mass Spectrometry
15.
Proc Natl Acad Sci U S A ; 106(48): 20520-5, 2009 Dec 01.
Article in English | MEDLINE | ID: mdl-19910530

ABSTRACT

Reactive oxygen species (ROS) mediate abscisic acid (ABA) signaling in guard cells. To dissect guard cell ABA-ROS signaling genetically, a cell type-specific functional genomics approach was used to identify 2 MAPK genes, MPK9 and MPK12, which are preferentially and highly expressed in guard cells. To provide genetic evidence for their function, Arabidopsis single and double TILLING mutants that carry deleterious point mutations in these genes were isolated. RNAi-based gene-silencing plant lines, in which both genes are silenced simultaneously, were generated also. Mutants carrying a mutation in only 1 of these genes did not show any altered phenotype, indicating functional redundancy in these genes. ABA-induced stomatal closure was strongly impaired in 2 independent RNAi lines in which both MPK9 and MPK12 transcripts were significantly silenced. Consistent with this result, mpk9-1/12-1 double mutants showed an enhanced transpirational water loss and ABA- and H(2)O(2)-insensitive stomatal response. Furthermore, ABA and calcium failed to activate anion channels in guard cells of mpk9-1/12-1, indicating that these 2 MPKs act upstream of anion channels in guard cell ABA signaling. An MPK12-YFP fusion construct rescued the ABA-insensitive stomatal response phenotype of mpk9-1/12-1, demonstrating that the phenotype was caused by the mutations. The MPK12 protein is localized in the cytosol and the nucleus, and ABA and H(2)O(2) treatments enhance the protein kinase activity of MPK12. Together, these results provide genetic evidence that MPK9 and MPK12 function downstream of ROS to regulate guard cell ABA signaling positively.


Subject(s)
Abscisic Acid/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Mitogen-Activated Protein Kinases/metabolism , Plant Stomata/metabolism , Reactive Oxygen Species/metabolism , Signal Transduction/physiology , Blotting, Western , Calcium/metabolism , Immunoprecipitation , Microscopy, Confocal , Mitogen-Activated Protein Kinases/genetics , Mutation/genetics , Plant Stomata/cytology , RNA Interference , Signal Transduction/genetics
16.
Plant Cell ; 20(2): 423-37, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18263774

ABSTRACT

The infection of plants by obligate parasitic nematodes constitutes an interesting model for investigating plant cytoskeleton functions. Root knot nematodes have evolved the ability to manipulate host functions to their own advantage by redifferentiating root cells into multinucleate and hypertrophied feeding cells. These giant cells result from repeated rounds of karyokinesis without cell division. Detailed functional analyses demonstrated that Arabidopsis thaliana Microtubule-Associated Protein65-3 (MAP65-3) was essential for giant cell ontogenesis and that cytokinesis was initiated but not completed in giant cells. In developing giant cells, MAP65-3 was associated with a novel kind of cell plate-the giant cell mini cell plate-that separates daughter nuclei. In the absence of functional MAP65-3, giant cells developed but failed to fully differentiate and were eventually destroyed. These defects in giant cells impaired the maturation of nematode larvae. Thus, MAP65-3 is essential for giant cell development during root knot nematode infection. Subcellular localization of MAP65-3 and analysis of microtubule organization in the dyc283 T-DNA map65-3 mutant demonstrated that MAP65-3 played a critical role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs. Here, we propose a model for the role of MAP65-3 in giant cell ontogenesis.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Giant Cells/metabolism , Microtubule-Associated Proteins/metabolism , Nematoda/growth & development , Animals , Arabidopsis/genetics , Arabidopsis/parasitology , Arabidopsis Proteins/genetics , Cell Differentiation/genetics , Cell Differentiation/physiology , Cytokinesis/genetics , Cytokinesis/physiology , Gene Expression Regulation, Plant , Giant Cells/parasitology , Giant Cells/ultrastructure , Microscopy, Confocal , Microscopy, Electron, Transmission , Microtubule-Associated Proteins/genetics
17.
Mol Plant ; 1(2): 198-217, 2008 Mar.
Article in English | MEDLINE | ID: mdl-19825533

ABSTRACT

The mode of abscisic acid (ABA) action, and its relations to drought adaptive responses in particular, has been a captivating area of plant hormone research for much over a decade. The hormone triggers stomatal closure to limit water loss through transpiration, as well as mobilizes a battery of genes that presumably serve to protect the cells from the ensuing oxidative damage in prolonged stress. The signaling network orchestrating these various responses is, however, highly complex. This review summarizes several significant advances made within the last few years. The biosynthetic pathway of the hormone is now almost completely elucidated, with the latest identification of the ABA4 gene encoding a neoxanthin synthase, which seems essential for de novo ABA biosynthesis during water stress. This leads to the interesting question on how ABA is then delivered to perception sites. In this respect, regulated transport has attracted renewed focus by the unexpected finding of a shoot-to-root translocation of ABA during drought response, and at the cellular level, by the identification of a beta-galactosidase that releases biologically active ABA from inactive ABA-glucose ester. Surprising candidate ABA receptors were also identified in the form of the Flowering Time Control Protein A (FCA) and the Chloroplastic Magnesium Protoporphyrin-IX Chelatase H subunit (CHLH) in chloroplast-nucleus communication, both of which have been shown to bind ABA in vitro. On the other hand, the protein(s) corresponding to the physiologically detectable cell-surface ABA receptor(s) is (are) still not known with certainty. Genetic and physiological studies based on the guard cell have reinforced the central importance of reversible phosphorylation in modulating rapid ABA responses. Sucrose Non-Fermenting Related Kinases (SnRK), Calcium-Dependent Protein Kinases (CDPK), Protein Phosphatases (PP) of the 2C and 2A classes figure as prominent regulators in this single-cell model. Identifying their direct in vivo targets of regulation, which may include H(+)-ATPases, ion channels, 14-3-3 proteins and transcription factors, will logically be the next major challenge. Emerging evidence also implicates ABA as a repressor of innate immune response, as hinted by the highly similar roster of genes elicited by certain pathogens and ABA. Undoubtedly, the most astonishing revelation is that ABA is not restricted to plants and mosses, but overwhelming evidence now indicates that it also exists in metazoans ranging from the most primitive to the most advance on the evolution scale (sponges to humans). In metazoans, ABA has healing properties, and plays protective roles against both environmental and pathogen related injuries. These cross-kingdom comparisons have shed light on the surprising ancient origin of ABA and its attendant mechanisms of signal transduction.


Subject(s)
Abscisic Acid/biosynthesis , Abscisic Acid/physiology , Plant Physiological Phenomena , Acclimatization/physiology , Alkyl and Aryl Transferases/genetics , Alkyl and Aryl Transferases/metabolism , Arabidopsis/enzymology , Arabidopsis/genetics , Chloroplasts/physiology , Droughts , Geranylgeranyl-Diphosphate Geranylgeranyltransferase , Oxidoreductases/genetics , Signal Transduction , Nicotiana/enzymology , Vicia faba/genetics , Vicia faba/physiology
18.
Plant J ; 44(3): 447-58, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16236154

ABSTRACT

During a compatible interaction, root-knot nematodes (Meloidogyne spp.) induce the redifferentiation of root cells into multinucleate nematode feeding cells (giant cells). Hyperplasia and hypertrophy of the surrounding cells leads to the formation of a root gall. We investigated the plant response to root-knot nematodes by carrying out a global analysis of gene expression during gall formation in Arabidopsis, using giant cell-enriched root tissues. Among 22 089 genes monitored with the complete Arabidopsis transcriptome microarray gene-specific tag, we identified 3373 genes that display significant differential expression between uninfected root tissues and galls at different developmental stages. Quantitative PCR analysis and the use of promoter GUS fusions confirmed the changes in mRNA levels observed in our microarray analysis. We showed that a comparable number of genes were found to be up- and downregulated, indicating that gene downregulation might be essential to allow proper gall formation. Moreover, many genes belonging to the same family are differently regulated in feeding cells. This genome-wide overview of gene expression during plant-nematode interaction provides new insights into nematode feeding-cell formation, and highlights that the suppression of plant defence is associated with nematode feeding-site development.


Subject(s)
Arabidopsis/genetics , Arabidopsis/parasitology , Gene Expression Profiling , Gene Expression Regulation, Plant , Plant Tumors/genetics , Plant Tumors/parasitology , Tylenchoidea/physiology , Animals , Arabidopsis Proteins/genetics , Genome, Plant , Host-Parasite Interactions/genetics , Oligonucleotide Array Sequence Analysis , Polymerase Chain Reaction , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reproducibility of Results
19.
Plant Cell ; 16(9): 2529-40, 2004 Sep.
Article in English | MEDLINE | ID: mdl-15319477

ABSTRACT

Plant-parasitic nematodes Meloidogyne spp induce an elaborate permanent feeding site characterized by the redifferentiation of root cells into multinucleate and hypertrophied giant cells. We have isolated by a promoter trap strategy an Arabidopsis thaliana formin gene, AtFH6, which is upregulated during giant cell formation. Formins are actin-nucleating proteins that stimulate de novo polymerization of actin filaments. We show here that three type-I formins were upregulated in giant cells and that the AtFH6 protein was anchored to the plasma membrane and uniformly distributed. Suppression of the budding defect of the Saccharomyces cerevisiae bni1Delta bnr1Delta mutant showed that AtFH6 regulates polarized growth by controlling the assembly of actin cables. Our results suggest that AtFH6 might be involved in the isotropic growth of hypertrophied feeding cells via the reorganization of the actin cytoskeleton. The actin cables would serve as tracks for vesicle trafficking needed for extensive plasma membrane and cell wall biogenesis. Therefore, determining how plant parasitic nematodes modify root cells into giant cells represents an attractive system to identify genes that regulate cell growth and morphogenesis.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Arabidopsis/parasitology , Membrane Proteins/metabolism , Microfilament Proteins/metabolism , Nematode Infections/metabolism , Tylenchoidea/metabolism , Actins/metabolism , Amino Acid Sequence/genetics , Animals , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/isolation & purification , Base Sequence/genetics , Cell Membrane/genetics , Cell Membrane/metabolism , Cell Wall/genetics , Cell Wall/metabolism , DNA, Complementary/analysis , DNA, Complementary/genetics , Formins , Gene Expression Regulation, Plant/genetics , Glucuronidase/metabolism , Host-Parasite Interactions/genetics , Membrane Proteins/genetics , Membrane Proteins/isolation & purification , Microfilament Proteins/genetics , Microfilament Proteins/isolation & purification , Molecular Sequence Data , Mutation/genetics , Nematode Infections/genetics , Phylogeny , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Transport Vesicles/genetics , Transport Vesicles/metabolism , Up-Regulation/genetics
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