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1.
Biochimie ; 95(12): 2392-403, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24028823

ABSTRACT

NDUFS3 is an integral subunit of the Q module of the mitochondrial respiratory Complex-I. The combined mutation (T145I + R199W) in the subunit is reported to cause optic atrophy and Leigh syndrome accompanied by severe Complex-I deficiency. In the present study, we have cloned and overexpressed the human NDUFS3 subunit and its double mutant in a soluble form in Escherichia coli. The wild-type (w-t) and mutant proteins were purified to homogeneity through a serial two-step chromatographic purification procedure of anion exchange followed by size exclusion chromatography. The integrity and purity of the purified proteins was confirmed by Western blot analysis and MALDI-TOF/TOF. The conformational transitions of the purified subunits were studied through steady state as well as time resolved fluorescence and CD spectroscopy under various denaturing conditions. The mutant protein showed altered polarity around tryptophan residues, changed quenching parameters and also noticeably altered secondary and tertiary structure compared to the w-t protein. Mutant also exhibited a higher tendency than the w-t protein for aggregation which was examined using fluorescent (Thioflavin-T) and spectroscopic (Congo red) dye binding techniques. The pH stability of the w-t and mutant proteins varied at extreme acidic pH and the molten globule like structure of w-t at pH1 was absent in case of the mutant protein. Both the w-t and mutant proteins showed multi-step thermal and Gdn-HCl induced unfolding. Thus, the results provide insight into the alterations of NDUFS3 protein structure caused by the mutations, affecting the overall integrity of the protein and finally leading to disruption of Complex-I assembly.


Subject(s)
NADH Dehydrogenase/chemistry , NADH Dehydrogenase/genetics , Protein Structure, Quaternary , Circular Dichroism , Cloning, Molecular , Electron Transport Complex I/genetics , Humans , Hydrogen-Ion Concentration , Leigh Disease/genetics , Mitochondria/genetics , Mutation , Protein Conformation/drug effects , Protein Denaturation , Protein Stability , Spectrometry, Fluorescence , Tryptophan/chemistry
2.
Int J Biol Macromol ; 56: 149-55, 2013 May.
Article in English | MEDLINE | ID: mdl-23485479

ABSTRACT

The Cicer arietinum seed lectin was cloned and expressed in Escherichia coli and purified in active form. Conformational characterization of the recombinant lectin (rCAL) was performed using biophysical and bioinformatics tools. Thermal denaturation of rCAL caused rapid secondary structural rearrangements above 50 °C and transient exposure of hydrophobic residues at 55 °C, leading to aggregation. Treatment of rCAL with GdnHCl resulted in unfolding followed by dissociation of the dimer. The single tryptophan in rCAL present on the surface of the protein is surrounded by hydrophobic and acidic amino acids and exists as different conformers. The experimental observations correlated well with the structural information revealed from the homology model of rCAL.


Subject(s)
Cicer/chemistry , Computer Simulation , Lectins/chemistry , Recombinant Proteins/chemistry , Seeds/chemistry , Animals , Cicer/drug effects , Cloning, Molecular , Guanidine/pharmacology , Lectins/isolation & purification , Models, Molecular , Molecular Sequence Data , Protein Denaturation/drug effects , Protein Refolding/drug effects , Protein Structure, Secondary , Protein Unfolding/drug effects , Rabbits , Recombinant Proteins/isolation & purification , Reproducibility of Results , Solutions , Spectrometry, Fluorescence , Structural Homology, Protein , Temperature , Tryptophan/metabolism
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