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1.
Lab Chip ; 8(11): 1883-7, 2008 Nov.
Article in English | MEDLINE | ID: mdl-18941689

ABSTRACT

We have investigated a new magnetic labelling technology for high-throughput biomolecular identification and DNA sequencing. Planar multi-bit magnetic tags comprising a magnetic barcode formed by an ensemble of micron-sized thin film ferromagnetic Co bars and a 15 x 15 micron Au square for immobilization of probe molecules have been designed and fabricated. We show that by using a globally applied magnetic field and magneto-optical Kerr microscopy the magnetic elements in the multi-bit magnetic tags can be addressed individually and encoded/decoded remotely. The power of the approach is the read/write technique, which allows modest globally applied magnetic fields to write almost unlimited numbers of codes to populations of tags rather than individuals. The magnetic nature of the technology also lends itself naturally to fast, remote decoding and the ability to rewrite tags if needed. We demonstrate the critical steps needed to show the feasibility of this technology, including fabrication, remote writing and reading, and successful functionalization of the tags as verified by fluorescence detection. This approach is ideal for encoding information on tags in microfluidic flow or suspension, in order to label oligonucleotides during split-and-mix synthesis, and for combinatorial library-based high-throughput multiplexed bioassays.


Subject(s)
Electronic Data Processing , Magnetics , Microarray Analysis/methods , Base Sequence , Fluorescence , Microscopy , Oligonucleotides/genetics
2.
Vet Parasitol ; 110(1-2): 123-9, 2002 Dec 11.
Article in English | MEDLINE | ID: mdl-12446097

ABSTRACT

The Babesia gibsoni heat shock protein 70 gene (BGHsp70) was cloned by polymerase chain reaction (PCR) and sequenced. The length of the gene was 1938 bp and the predicted polypeptide was 646 amino acids long with a calculated molecular weight of 70,627. The amino acid sequences of BGHsp70 from 17 isolates were identical, though there were six types of polymorphisms among the corresponding nucleotide sequences. There was no intron in the BGHsp70 gene. Phylogenetic analysis of the amino acid sequence of Hsp70 showed that B. gibsoni was most closely related to B. bovis and lies within a phylogenetic cluster with Theileria. These results suggest that Hsp70 was well conserved among intraerythrocytic protozoa.


Subject(s)
Babesia/genetics , HSP70 Heat-Shock Proteins/genetics , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , Dogs , Female , HSP70 Heat-Shock Proteins/chemistry , Male , Molecular Sequence Data , Phylogeny , RNA/chemistry , RNA/genetics , Reverse Transcriptase Polymerase Chain Reaction , Sequence Homology, Amino Acid
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