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1.
BMC Med Imaging ; 22(1): 70, 2022 04 15.
Article in English | MEDLINE | ID: mdl-35428272

ABSTRACT

PURPOSE: To develop a clinical-radiomics nomogram by incorporating radiomics score and clinical predictors for preoperative prediction of microvascular invasion in hepatocellular carcinoma. METHODS: A total of 97 HCC patients were retrospectively enrolled from Shanghai Universal Medical Imaging Diagnostic Center and Changhai Hospital Affiliated to the Second Military Medical University. 909 CT and 909 PET slicers from 97 HCC patients were divided into a training cohort (N = 637) and a validation cohort (N = 272). Radiomics features were extracted from each CT or PET slicer, and features selection was performed with least absolute shrinkage and selection operator regression and radiomics score was also generated. The clinical-radiomics nomogram was established by integrating radiomics score and clinical predictors, and the performance of the models were evaluated from its discrimination ability, calibration ability, and clinical usefulness. RESULTS: The radiomics score consisted of 45 selected features, and age, the ratio of maximum to minimum tumor diameter, and [Formula: see text]F-FDG uptake status were independent predictors of microvascular invasion. The clinical-radiomics nomogram showed better performance for MVI detection (0.890 [0.854, 0.927]) than the clinical nomogram (0.849 [0.804, 0.893]) ([Formula: see text]). Both nomograms showed good calibration and the clinical-radiomics nomogram's clinical practicability outperformed the clinical nomogram. CONCLUSIONS: With the combination of radiomics score and clinical predictors, the clinical-radiomics nomogram can significantly improve the predictive efficacy of microvascular invasion in hepatocellular carcinoma ([Formula: see text]) compared with clinical nomogram.


Subject(s)
Carcinoma, Hepatocellular , Liver Neoplasms , Carcinoma, Hepatocellular/diagnostic imaging , Carcinoma, Hepatocellular/surgery , China , Fluorodeoxyglucose F18 , Humans , Liver Neoplasms/diagnostic imaging , Liver Neoplasms/surgery , Nomograms , Positron Emission Tomography Computed Tomography , Retrospective Studies
2.
Biomed Pharmacother ; 129: 110354, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32540644

ABSTRACT

ALOX12 encodes arachidonic acid 12-lipoxygenase that acts on different polyunsaturated fatty acid substrates to produce biologically active lipid mediators including eicosanes and lipoxins. ALOX12 protein plays an important role in inflammation and oxidation, while abnormal DNA methylation and genetic variants of ALOX12 are associated with various human diseases and pathological phenotypes, such as cardiovascular disease, diabetes, neurodegenerative diseases, respiratory system disease, cancer, infection, etc. Here, this article reviews the mechanisms by which ALOX12 participates in related diseases, which will provide systematic knowledge for future ALOX12 related studies.


Subject(s)
Arachidonate 12-Lipoxygenase/metabolism , Animals , Arachidonate 12-Lipoxygenase/genetics , Cardiovascular Diseases/enzymology , Cardiovascular Diseases/genetics , Genetic Predisposition to Disease , Humans , Inflammation/enzymology , Inflammation/genetics , Metabolic Diseases/enzymology , Metabolic Diseases/genetics , Neoplasms/enzymology , Neoplasms/genetics , Nervous System Diseases/enzymology , Nervous System Diseases/genetics , Phenotype , Polymorphism, Single Nucleotide , Signal Transduction
3.
Mol Ther Nucleic Acids ; 20: 13-24, 2020 Jun 05.
Article in English | MEDLINE | ID: mdl-32171170

ABSTRACT

N4-acetylcytidine (ac4C) is often considered to be a conservative, chemically modified nucleoside present on tRNA and rRNA. Recent studies have shown extensive ac4C modifications in human and yeast mRNAs. ac4C helps to correctly read codons during translation and improves translation efficiency and the stability of mRNA. At present, the research of ac4C involves a variety of detection methods. The formation of ac4C is closely related to N-acetyltransferase 10 (NAT10) and its helpers, such as putative tRNA acetyltransferase (TAN1) for tRNA ac4C and small nucleolar RNA (snoRNA) for rRNA ac4C. Also, ac4C is associated with the development, progression, and prognosis of a variety of human diseases. Here, we summarize the history of ac4C research and the detection technologies of ac4C. We then summarized the role and mechanism of ac4C in gene-expression regulation and demonstrated the relevance of ac4C to a variety of human diseases, especially cancer. Finally, we list the future challenges of the ac4C research and demonstrate a research strategy for the interactions among several abundant modified nucleosides on mRNA.

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