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2.
Am J Respir Crit Care Med ; 192(3): 367-73, 2015 Aug 01.
Article in English | MEDLINE | ID: mdl-26017193

ABSTRACT

RATIONALE: Interferon-γ release assays have significant advantages over tuberculin skin testing in many clinical situations. However, recent studies have called into question their reliability in serial testing of healthcare workers because of reportedly high rates of positivity and high conversion/reversion rates on retesting. OBJECTIVES: To define the performance characteristics of the T-SPOT.TB test, an interferon-γ release assay, during serial screening programs of healthcare workers at 19 U.S. hospitals. METHODS: A total of 42,155 T-SPOT.TB test results from healthcare workers at 19 geographically diverse hospitals obtained for routine tuberculosis screening programs were analyzed to determine the rates of positivity, reversion, and conversion in serial testing data. MEASUREMENTS AND MAIN RESULTS: In 19,630 evaluable serial pairs from 16,076 healthcare workers, the mean test positivity rate was 2.3% (range, 0.0-27.4%). The mean conversion rate was 0.8% (range, 0.0-2.5%), and the mean reversion rate was 17.6%. Positivity and conversion rates correlated with known tuberculosis risk factors including age and sex. The observed specificity of the T-SPOT.TB test was at least 98.6%. CONCLUSIONS: The high concordance and test completion rates in this study suggest that the T-SPOT.TB test is a reliable tool for healthcare worker serial screening. As expected, the observed positivity rates were lower compared with the tuberculin skin test, likely reflecting the higher specificity of this test. Furthermore, the observed rates of conversion were low and significantly correlated with the geographic incidence of tuberculosis. Our findings suggest that the T-SPOT.TB test is an accurate and reliable way to screen healthcare workers.


Subject(s)
Interferon-gamma Release Tests/statistics & numerical data , Mass Screening/methods , Personnel, Hospital/statistics & numerical data , Tuberculosis/diagnosis , Adolescent , Adult , Aged , Aged, 80 and over , Female , Hospitals , Humans , Male , Middle Aged , Reproducibility of Results , Tuberculin Test/statistics & numerical data , United States , Young Adult
5.
Mol Genet Metab ; 92(1-2): 160-7, 2007.
Article in English | MEDLINE | ID: mdl-17574468

ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD) is estimated to affect 1/600-1/1000 individuals worldwide. The disease is characterized by age dependent renal cyst formation that results in kidney failure during adulthood. Although ultrasound imaging may be an adequate diagnostic tool in at risk individuals older than 30, this modality may not be sufficiently sensitive in younger individuals or for those from PKD2 families who have milder disease. DNA based assays may be indicated in certain clinical situations where imaging cannot provide a definitive clinical diagnosis. The goal of this study was to evaluate the utility of direct DNA analysis in a test sample of 82 individuals who were judged to have polycystic kidney disease by standard clinical criteria. The samples were analyzed using a commercially available assay that employs sequencing of both genes responsible for the disorder. Definite disease causing mutations were identified in 34 (approximately 42%) study participants. An additional 30 (approximately 37%) subjects had either in frame insertions/deletions, non-canonical splice site alterations or a combination of missense changes that were also judged likely to be pathogenic. We noted striking sequence variability in the PKD1 gene, with a mean of 13.1 variants per participant (range 0-60). Our results and analysis highlight the complexity of assessing the pathogenicity of missense variants particularly when individuals have multiple amino acid substitutions. We conclude that a significant fraction of ADPKD mutations are caused by amino acid substitutions that need to be interpreted carefully when utilized in clinical decision-making.


Subject(s)
Genetic Testing/statistics & numerical data , Polycystic Kidney, Autosomal Dominant/diagnosis , Polycystic Kidney, Autosomal Dominant/genetics , Adult , Age of Onset , Aged , Amino Acid Sequence , Codon, Nonsense , DNA Mutational Analysis , Female , Frameshift Mutation/genetics , Gene Deletion , Genetic Variation , Genotype , Humans , Male , Middle Aged , Molecular Diagnostic Techniques , Molecular Sequence Data , Polymorphism, Genetic , RNA Splice Sites , Sequence Homology, Amino Acid , TRPP Cation Channels/analysis
6.
Brain ; 130(Pt 3): 843-52, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17347258

ABSTRACT

The relationship between severe myoclonic epilepsy of infancy (SMEI or Dravet syndrome) and the related syndrome SMEI-borderland (SMEB) with mutations in the sodium channel alpha 1 subunit gene SCN1A is well established. To explore the phenotypic variability associated with SCN1A mutations, 188 patients with a range of epileptic encephalopathies were examined for SCN1A sequence variations by denaturing high performance liquid chromatography and sequencing. All patients had seizure onset within the first 2 years of life. A higher proportion of mutations were identified in patients with SMEI (52/66; 79%) compared to patients with SMEB (25/36; 69%). By studying a broader spectrum of infantile epileptic encephalopathies, we identified mutations in other syndromes including cryptogenic generalized epilepsy (24%) and cryptogenic focal epilepsy (22%). Within the latter group, a distinctive subgroup designated as severe infantile multifocal epilepsy had SCN1A mutations in three of five cases. This phenotype is characterized by early onset multifocal seizures and later cognitive decline. Knowledge of an expanded spectrum of epileptic encephalopathies associated with SCN1A mutations allows earlier diagnostic confirmation for children with these devastating disorders.


Subject(s)
Epilepsy/genetics , Nerve Tissue Proteins/genetics , Neurodegenerative Diseases/genetics , Sodium Channels/genetics , Adolescent , Adult , Age of Onset , Base Sequence/genetics , Child , Child, Preschool , DNA Mutational Analysis/methods , Epilepsies, Myoclonic/genetics , Epilepsies, Partial/genetics , Epilepsy, Generalized/genetics , Humans , Models, Genetic , Mutation/genetics , Mutation, Missense/genetics , NAV1.1 Voltage-Gated Sodium Channel , Parents , Phenotype
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