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1.
Sci Signal ; 15(756): eabn4948, 2022 10 18.
Article in English | MEDLINE | ID: mdl-36256708

ABSTRACT

The tumor microbiome is increasingly implicated in cancer progression and resistance to chemotherapy. In pancreatic ductal adenocarcinoma (PDAC), high intratumoral loads of Fusobacterium nucleatum correlate with shorter survival in patients. Here, we investigated the potential mechanisms underlying this association. We found that F. nucleatum infection induced both normal pancreatic epithelial cells and PDAC cells to secrete increased amounts of the cytokines GM-CSF, CXCL1, IL-8, and MIP-3α. These cytokines increased proliferation, migration, and invasive cell motility in both infected and noninfected PDAC cells but not in noncancerous pancreatic epithelial cells, suggesting autocrine and paracrine signaling to PDAC cells. This phenomenon occurred in response to Fusobacterium infection regardless of the strain and in the absence of immune and other stromal cells. Blocking GM-CSF signaling markedly limited proliferative gains after infection. Thus, F. nucleatum infection in the pancreas elicits cytokine secretion from both normal and cancerous cells that promotes phenotypes in PDAC cells associated with tumor progression. The findings support the importance of exploring host-microbe interactions in pancreatic cancer to guide future therapeutic interventions.


Subject(s)
Carcinoma, Pancreatic Ductal , Pancreatic Neoplasms , Humans , Fusobacterium nucleatum , Granulocyte-Macrophage Colony-Stimulating Factor , Paracrine Communication , Interleukin-8 , Pancreatic Neoplasms/pathology , Carcinoma, Pancreatic Ductal/pathology , Cell Proliferation/physiology , Pancreas , Pancreatic Neoplasms
2.
J Interv Card Electrophysiol ; 63(3): 531-544, 2022 Apr.
Article in English | MEDLINE | ID: mdl-34424446

ABSTRACT

BACKGROUND: The ideal treatment of inappropriate sinus tachycardia (IST) and postural orthostatic tachycardia syndrome (POTS) still needs to be defined. Medical treatments yield suboptimal results. Endocardial catheter ablation of the sinus node (SN) may risk phrenic nerve damage and open-heart surgery may be accompanied by unjustified invasive risks. METHODS: We describe our first multicenter experience of 255 consecutive patients (235 females, 25.94 ± 3.84 years) having undergone a novel SN sparing hybrid thoracoscopic ablation for drug-resistant IST (n = 204, 80%) or POTS (n = 51, 20%). As previously described, the SN was identified with 3D mapping. Surgery was performed through three 5-mm ports from the right side. A minimally invasive approach with a bipolar radiofrequency clamp was used to ablate targeted areas while sparing the SN region. The targeted areas included isolation of the superior and the inferior caval veins, and a crista terminalis line was made. All lines were interconnected. RESULTS: Normal sinus rhythm (SR) was restored in all patients at the end of the procedure. All patients discontinued medication during the follow-up. After a blanking period of 6 months, all patients presented stable SR. At a mean of 4.07 ± 1.8 years, normal SN reduction and chronotropic response to exercise were present. In the 51 patients initially diagnosed with POTS, no syncope occurred. During follow-up, pericarditis was the most common complication (121 patients: 47%), with complete resolution in all cases. Pneumothorax was observed in 5 patients (1.9%), only 3 (1.1%) required surgical drainage. Five patients (1.9%) required a dual-chamber pacemaker due to sinus arrest > 5 s. CONCLUSIONS: Preliminary results of this multicenter experience with a novel SN sparing hybrid ablation of IST/POTS, using surgical thoracoscopic video-assisted epicardial ablation combined with simultaneous endocardial 3D mapping may prove to be an efficient and safe therapeutic option in patients with symptomatic drug-resistant IST and POTS. Importantly, in our study, all patients had a complete resolution of the symptoms and restored normal SN activity.


Subject(s)
Catheter Ablation , Postural Orthostatic Tachycardia Syndrome , Catheter Ablation/methods , Endocardium/surgery , Female , Humans , Postural Orthostatic Tachycardia Syndrome/diagnosis , Sinoatrial Node/surgery , Tachycardia, Sinus/diagnosis
3.
Am J Trop Med Hyg ; 82(6): 1121-6, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20519611

ABSTRACT

Our current knowledge of the clinical characteristics of enteric fever is drawn mainly from population-based studies in disease-endemic countries, and there are limited data published on cases in returning travelers. We report the clinical characteristics of enteric fever in 92 travelers returning to London, United Kingdom. Salmonella typhi and S. paratyphi resulted in an almost indistinguishable clinical picture. Rose spots and relative bradycardia were found only in a few patients. A total of 91% of the patients had a normal leukocyte count, which was associated with a markedly increased level of alanine aminotransferase in 82%. A total of 57% of the S. typhi isolates had decreased susceptibility to ciprofloxacin and resistance to nalidixic acid; these isolates were from southern Asia. Thirty percent were multidrug resistant; all were from southern Asia and Nigeria. None of the paratyphoid isolates were multidrug resistant but rates of decreased susceptibility to fluoroquinolones were higher than in S. typhi (74%).


Subject(s)
Travel , Typhoid Fever/epidemiology , Adult , Asia/epidemiology , Female , Humans , London/epidemiology , Male , Middle Aged , Nigeria/epidemiology , Typhoid Fever/microbiology
4.
BMC Res Notes ; 1: 70, 2008 Aug 28.
Article in English | MEDLINE | ID: mdl-18755023

ABSTRACT

BACKGROUND: PCR inhibition by nucleic acid extracts is a well known yet poorly described phenomenon. Inhibition assessment generally depends on the assumption that inhibitors affect all PCR reactions to the same extent; i.e. that the reaction of interest and the control reaction are equally susceptible to inhibition. To test this assumption we performed inhibition assessment on DNA extracts from human urine samples, fresh urine and EDTA using different PCR reactions. RESULTS: When copurified inhibitors were assessed using two different PCR reactions one reaction appeared to be inhibited whilst the other was not. Further experiments using various concentrations of unextracted urine to inhibit six different PCR reactions revealed that susceptibility to inhibition was highly variable between reactions. Similar results were obtained using EDTA as the PCR inhibitor. We could find no obvious explanation why one reaction should be more susceptible to inhibition than another, although a possible association with amplicon GC content was noted. CONCLUSION: These findings have serious implications for all PCR-based gene expression studies, including the relatively new PCR array method, and for both qualitative and quantitative PCR-based molecular diagnostic assays, suggesting that careful consideration should be given to inhibition compatibility when conducting PCR analyses. We have demonstrated unequivocally that it is not safe to assume that different PCR reactions are equally susceptible to inhibition by substances co-purified in nucleic acid extracts.

5.
Int J STD AIDS ; 19(7): 491-2, 2008 Jul.
Article in English | MEDLINE | ID: mdl-18574127

ABSTRACT

An HIV-infected man receiving antiretroviral therapy-who also had lupus-like vasculitis and membranous glomerulonephritis (treated with prednisolone and azathioprine), beta-thalassaemia minor trait and post-radiotherapy functional asplenia (mimicking sickle cell disease-induced hyposplenism)-developed focal soft issue and bone infection caused by Salmonella enteritidis at the site of previous mycobacterial infection.


Subject(s)
HIV Infections/complications , Immunologic Deficiency Syndromes/complications , Osteomyelitis/microbiology , Salmonella Infections/microbiology , Salmonella enteritidis , Soft Tissue Infections/microbiology , AIDS-Related Opportunistic Infections/microbiology , Adult , Biopsy , Humans , Male
6.
Pediatr Res ; 63(2): 143-8, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18091346

ABSTRACT

We studied expression of vascular endothelial growth factor A (VEGF-A) and its main receptor, VEGFR-2, in the small intestine from five groups of fetal sheep (each n = 5): 1) preterm controls, 2) term controls, 3) preterm animals where the fetus was infused with cortisol, or 4) saline, and 5) term animals where adrenalectomy had been performed preterm. The main transcript expressed in fetal small intestine was VEGF-A165. Comparing term with preterm animals, there were significantly higher levels of expression of VEGF-A protein (p = 0.005). Levels of VEGF-A protein expression were lower in term adrenalectomized animals (p = 0.01) and were higher in preterm animals infused with cortisol (p = 0.01), compared with their respective control groups. Immunohistochemistry demonstrated strongest expression of VEGF-A protein in the epithelial cells and lamina propria of the villi. Intestinal expression of mRNA encoding the VEGFR-2 receptor did not significantly vary with gestational age. In situ hybridization localized VEGFR-2 to the lamina propria of the villous core and receptor autoradiography using 125I VEGF-A demonstrated binding in the same site. These data show that intestinal VEGF-A is up-regulated with advancing gestation in a glucocorticoid-dependent manner--novel findings consistent with a role for VEGF-A stimulated angiogenesis in preparing the fetal gut for birth.


Subject(s)
Gene Expression Regulation, Developmental , Intestines/embryology , Vascular Endothelial Growth Factor A/metabolism , Vascular Endothelial Growth Factor Receptor-2/metabolism , Animals , Glucocorticoids/metabolism , Hydrocortisone/metabolism , Immunohistochemistry/methods , In Situ Hybridization , Models, Biological , RNA, Messenger/metabolism , Sheep , Sheep, Domestic , Up-Regulation
7.
Pac Symp Biocomput ; : 559-71, 2006.
Article in English | MEDLINE | ID: mdl-17094269

ABSTRACT

We propose a computational strategy for discovering gene networks affected by a chemical compound. Two kinds of DNA microarray data are assumed to be used: One dataset is short time-course data that measure responses of genes following an experimental treatment. The other dataset is obtained by several hundred single gene knock-downs. These two datasets provide three kinds of information; (i) A gene network is estimated from time-course data by the dynamic Bayesian network model, (ii) Relationships between the knocked-down genes and their regulatees are estimated directly from knock-down microarrays and (iii) A gene network can be estimated by gene knock-down data alone using the Bayesian network model. We propose a method that combines these three kinds of information to provide an accurate gene network that most strongly relates to the mode-of-action of the chemical compound in cells. This information plays an essential role in pharmacogenomics. We illustrate this method with an actual example where human endothelial cell gene networks were generated from a novel time course of gene expression following treatment with the drug fenofibrate, and from 270 novel gene knock-downs. Finally, we succeeded in inferring the gene network related to PPAR-alpha, which is a known target of fenofibrate.


Subject(s)
Gene Expression Profiling/statistics & numerical data , Oligonucleotide Array Sequence Analysis/statistics & numerical data , RNA/genetics , Bayes Theorem , Computational Biology , Endothelial Cells/drug effects , Endothelial Cells/metabolism , Fenofibrate/pharmacology , Gene Expression/drug effects , Humans , Models, Genetic , PPAR alpha/genetics , Pharmacogenetics , RNA, Small Interfering/genetics
8.
Infect Immun ; 73(9): 6147-50, 2005 Sep.
Article in English | MEDLINE | ID: mdl-16113337

ABSTRACT

Melanins are implicated in the pathogenesis of several important human diseases. This study confirmed the presence of melanin particles in Candida albicans in vitro and during infection. Dark particles were isolated from the digestion of C. albicans cultures and from infected tissue, as established by electron microscopy and immunofluorescence techniques.


Subject(s)
Candida albicans/metabolism , Candidiasis/metabolism , Melanins/biosynthesis , Animals , Candida albicans/pathogenicity , Candida albicans/ultrastructure , Candidiasis/microbiology , Enzyme-Linked Immunosorbent Assay , Male , Mice , Mice, Inbred BALB C , Microscopy, Electron, Scanning , Virulence
9.
FASEB J ; 18(1): 188-90, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14630703

ABSTRACT

The protein-based changes that underlie the cell biology of apoptosis have been extensively studied. In contrast, mRNA- and polysaccharide-based changes have received relatively little attention. We have combined transcriptome and glycome analyses to show that apoptotic endothelial cell cultures undergo programmed changes to RNA transcript abundance and cell surface polysaccharide profiles. Although a few of the transcriptome changes were protective, most appeared to prepare cells for apoptosis by decreasing the reception and transduction of pro-survival signals, increasing pro-death signals, increasing abundance of apoptotic machinery, inhibiting cellular proliferation, recruiting phagocytes to regions of cell death, and promoting phagocytosis. Additional transcriptomal changes appeared to alter the synthesis and modification of cell surface glycosaminoglycans. The resultant reduced abundance of sulphated cell surface glycosaminoglycans may further promote cell death by inhibiting the presentation of extracellular matrix-tethered survival factors to their receptors on dying cells. We propose that the transcriptome and glycome regulation presented here synergize with previously described protein-based changes to guide the apoptotic program.


Subject(s)
Apoptosis , Endothelium, Vascular/metabolism , Gene Expression Regulation , Cell Survival , Cells, Cultured , Endothelium, Vascular/cytology , Gene Expression Profiling , Heparan Sulfate Proteoglycans/metabolism , Humans , Immunohistochemistry , Oligonucleotide Array Sequence Analysis , Phagocytosis , Polymerase Chain Reaction , Protein Biosynthesis , Proteins/genetics , RNA, Messenger/metabolism , Transcription, Genetic
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