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Nucleic Acids Res ; 40(17): 8743-58, 2012 Sep 01.
Article in English | MEDLINE | ID: mdl-22753105

ABSTRACT

UvrB has a central role in the highly conserved UvrABC pathway functioning not only as a damage recognition element but also as an essential component of the lesion tracking machinery. While it has been recently confirmed that the tracking assembly comprises a UvrA2B2 heterotetramer, the configurations of the damage engagement and UvrB-DNA handover complexes remain obscure. Here, we present the first crystal structure of a UvrB dimer whose biological significance has been verified using both chemical cross-linking and electron paramagnetic resonance spectroscopy. We demonstrate that this dimeric species stably associates with UvrA and forms a UvrA2B2-DNA complex. Our studies also illustrate how signals are transduced between the ATP and DNA binding sites to generate the helicase activity pivotal to handover and formation of the UvrB2-DNA complex, providing key insights into the configurations of these important repair intermediates.


Subject(s)
Bacterial Proteins/chemistry , DNA Helicases/chemistry , DNA-Binding Proteins/chemistry , DNA/chemistry , Adenosine Triphosphate/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Binding Sites , Crystallography , DNA Damage , DNA Helicases/genetics , DNA Helicases/metabolism , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Dimerization , Models, Molecular , Mutagenesis, Site-Directed , Protein Structure, Tertiary
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