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1.
Korean Circ J ; 46(1): 93-8, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26798390

ABSTRACT

BACKGROUND AND OBJECTIVES: Chronic impairment of ß-adrenergic receptor signaling increases cardiac apoptosis, hypertrophy and fibrosis. The aim of this study was to investigate whether isoproterenol (ISO), an agonist of the adrenergic receptor, can enhance tumor necrosis factor-related apoptosis-inducing ligand (TRAIL)-induced apoptosis in human embryonic kidney (HEK) 293 cells. MATERIALS AND METHODS: HEK 293 cells were treated with ISO and/or TRAIL for 24 hours. Cell viability was evaluated by microscopy and an established viability assay, and apoptotic cell death was analyzed by staining with fluorescein isothiocynate-annexin-V/propidium iodide (PI) and caspase activation. To confirm the mechanism of cell death induced by co-treatment with ISO and TRAIL, expression of TRAIL receptor 2 (death receptor 5, DR5) was evaluated by immunoblotting. RESULTS: Although ISO or TRAIL treatment decreased HEK 293 cell viability by 13% and 17%, respectively, co-treatment with ISO and TRAIL resulted in a markedly higher death rate of 35% after 24 hours. Increases were evident in early apoptotic cells (i.e., annexin-V positive/PI negative; 19.4%), late apoptotic cells (i.e., annexin-V positive/PI positive; 6.3%) and dead cells (i.e., annexin-V negative/PI positive; 1.1%) when cells were co-treated with ISO and TRAIL, compared to cells treated with either ISO or TRAIL. In addition, marked increases of cleaved cas-3, cleaved poly (adenosine diphosphate-ribose) polymerase and DR5 were observed in HEK 293 cells co-treated with ISO and TRAIL. CONCLUSION: Treatments combining ISO with TRAIL may be responsible for death of HEK 293 cells through DR5 up-regulation. Activation of adrenergic receptors is responsible for the synergistic cell death observed with TRAIL.

2.
Article in English | MEDLINE | ID: mdl-22442225

ABSTRACT

A triclosan-resistant flavoprotein termed FabK is the sole enoyl-acyl carrier protein reductase in Streptococcus pneumoniae and Streptococcus mutans. In this study, FabK from S. mutans strain UA159 was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 2.40 Å resolution using a synchrotron-radiation source. The crystal belonged to space group P6(2), with unit-cell parameters a = b = 105.79, c = 44.15 Å. The asymmetric unit contained one molecule, with a corresponding V(M) of 2.05 Å(3) Da(-1) and a solvent content of 39.9%.


Subject(s)
Oxidoreductases Acting on CH-CH Group Donors/chemistry , Streptococcus mutans/enzymology , Crystallization , Crystallography, X-Ray , Oxidoreductases Acting on CH-CH Group Donors/isolation & purification
3.
Article in English | MEDLINE | ID: mdl-22232183

ABSTRACT

Primase is the enzyme that synthesizes RNA primers on single-stranded DNA during normal DNA replication. In this study, the catalytic core domain of primase from Streptococcus mutans UA159 was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 1.60 Å resolution using a synchrotron-radiation source. The crystal belonged to space group P4(1) or P4(3), with unit-cell parameters a = b = 52.63, c = 110.31 Å. The asymmetric unit is likely to contain one molecule, with a corresponding V(M) of 1.77 Å(3) Da(-1) and a solvent content of 30.7%.


Subject(s)
DNA Primase/chemistry , Streptococcus mutans/enzymology , Crystallization , Crystallography, X-Ray , Protein Structure, Tertiary
4.
Article in English | MEDLINE | ID: mdl-21301105

ABSTRACT

DNA gyrase is a type II topoisomerase that is essential for chromosome segregation and cell division owing to its ability to modify the topological form of bacterial DNA. In this study, the C-terminal domain of the GyrA subunit of DNA gyrase from Staphylococcus aureus Mu50 strain was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 2.80 Šresolution using a synchrotron-radiation source. The crystal belonged to space group P2(1), with unit-cell parameters a = 37.28, b = 80.19, c = 50.22 Å, ß = 110.64°. The asymmetric unit contained one molecule, with a corresponding V(M) of 2.02 Å(3) Da(-1) and a solvent content of 39.2%.


Subject(s)
Bacterial Proteins/chemistry , DNA Gyrase/chemistry , Staphylococcus aureus/chemistry , Crystallization , Crystallography, X-Ray/methods , DNA Gyrase/isolation & purification , DNA Topoisomerases, Type II/isolation & purification , Escherichia coli/isolation & purification , Protein Structure, Tertiary , Synchrotrons
5.
Acta Crystallogr Sect F Struct Biol Cryst Commun ; 66(Pt 12): 1674-6, 2010 Dec 01.
Article in English | MEDLINE | ID: mdl-21139222

ABSTRACT

DEAD-box helicases are enzymes with an ATP-dependent RNA-unwinding function that are involved in a variety of cellular processes including RNA splicing, ribosome biogenesis and RNA degradation. In this study, the N-terminal domain of DEAD-box RNA helicase from Staphylococcus aureus strain Mu50 was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 2.60 Šresolution using a synchrotron-radiation source. The crystal belonged to space group P1, with unit-cell parameters a=70.81, b=80.23, c=86.25 Å, α=69.54, ß=66.54, γ=87.32°. The unit cell contained six molecules, with a corresponding VM of 2.91 Å3 Da(-1) and a solvent content of 56.1%.


Subject(s)
Bacterial Proteins/chemistry , Bacterial Proteins/isolation & purification , DEAD-box RNA Helicases/chemistry , DEAD-box RNA Helicases/isolation & purification , Staphylococcus aureus/enzymology , Cloning, Molecular , Crystallization , Crystallography, X-Ray , Protein Structure, Tertiary
6.
Article in English | MEDLINE | ID: mdl-20383017

ABSTRACT

DNA gyrase is a type II topoisomerase that is essential for chromosome segregation and cell division owing to its ability to modify the topological forms of bacterial DNA. In this study, the N-terminal breakage-reunion domain of the GyrA subunit of DNA gyrase from Colwellia psychrerythraea 34H was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 2.60 A resolution using a synchrotron-radiation source. The crystal belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 98.98, b = 101.56, c = 141.83 A. The asymmetric unit contained two molecules, with a corresponding V(M) of 3.18 A(3) Da(-1) and a solvent content of 59.9%.


Subject(s)
Alteromonadaceae/enzymology , DNA Gyrase/chemistry , Crystallography, X-Ray
7.
Article in English | MEDLINE | ID: mdl-20057069

ABSTRACT

DNA gyrase is a type II topoisomerase that is essential for chromosome segregation and cell division owing to its ability to modify the topological forms of bacterial DNA. In this study, the N-terminal fragment of the GyrB subunit of DNA gyrase from Xanthomonas oryzae pv. oryzae was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 2.10 A resolution using a synchrotron-radiation source. The crystal belonged to space group I4(1), with unit-cell parameters a = b = 110.27, c = 70.75 A. The asymmetric unit contained one molecule, with a V(M) of 2.57 A(3) Da(-1) and a solvent content of 50.2%.


Subject(s)
DNA Gyrase/chemistry , Crystallization , Crystallography, X-Ray , Xanthomonas
8.
Biochem Biophys Res Commun ; 391(1): 187-92, 2010 Jan 01.
Article in English | MEDLINE | ID: mdl-19900410

ABSTRACT

Acetyl-CoA carboxylases (ACCs) have been highlighted as therapeutic targets for obesity and diabetes, as they play crucial roles in fatty acid metabolism. ACC activity is regulated through the short-term mechanism of inactivation by reversible phosphorylation. Here, we report the crystal structures of the biotin carboxylase (BC) domain of human ACC2 phosphorylated by AMP-activated protein kinase (AMPK). The phosphorylated Ser222 binds to the putative dimer interface of BC, disrupting polymerization and providing the molecular mechanism of inactivation by AMPK. We also determined the structure of the human BC domain in complex with soraphen A, a macrocyclic polyketide natural product. This structure shows that the compound binds to the binding site of phosphorylated Ser222, implying that its inhibition mechanism is the same as that of phosphorylation by AMPK.


Subject(s)
Acetyl-CoA Carboxylase/chemistry , Biotin/chemistry , Protein Kinases/metabolism , Serine/chemistry , AMP-Activated Protein Kinase Kinases , Acetyl-CoA Carboxylase/genetics , Acetyl-CoA Carboxylase/metabolism , Biotin/metabolism , Crystallography, X-Ray , Humans , Macrolides/chemistry , Phosphorylation , Protein Structure, Tertiary , Serine/genetics , Serine/metabolism
9.
FEMS Microbiol Lett ; 280(2): 176-81, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18248428

ABSTRACT

In the current work, regulation of the pap1(+) gene was investigated by the use of the pap1(+)-lacZ fusion gene and semi-quantitative reverse transcriptase-PCR. The synthesis of beta-galactosidase from the pap1(+)-lacZ fusion gene was significantly enhanced by nitric oxide (NO)-generating sodium nitroprusside (SNP) and nitrogen starvation. However, the induction by SNP and nitrogen starvation was observed to be much less in the Pap1p-negative cells harboring the fusion gene. Exogenous NO was more effectively scavenged in the Pap1p-positive cells than in the Pap1p-negative cells. Oxidative stress such as superoxide anion, hydrogen peroxide and cadmium could not give rise to an effect on the synthesis of beta-galactosidase from the fusion gene. The pap1(+) mRNA level was elevated in the wild-type cells by SNP and nitrogen starvation. Catalase activity, a major enzyme positively regulated by Pap1p, was significantly increased only in the Pap1p-positive cells by SNP. In brief, it is demonstrated that transcription of the Schizosaccharomyces pombe pap1(+) gene is positively regulated by nitrosative and nutritional stress in a Pap1p-dependent manner.


Subject(s)
Basic-Leucine Zipper Transcription Factors/metabolism , Gene Expression Regulation, Fungal , Nitrates/metabolism , Schizosaccharomyces pombe Proteins/metabolism , Schizosaccharomyces/genetics , Basic-Leucine Zipper Transcription Factors/genetics , Nitrogen/metabolism , Nitrosation , Nutrition Assessment , Pancreatitis-Associated Proteins , Schizosaccharomyces/physiology , Schizosaccharomyces pombe Proteins/genetics
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