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1.
Sci Rep ; 8(1): 6787, 2018 Apr 25.
Article in English | MEDLINE | ID: mdl-29693654

ABSTRACT

A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper.

2.
Sci Rep ; 7(1): 15042, 2017 11 08.
Article in English | MEDLINE | ID: mdl-29118372

ABSTRACT

A safe and broadly effective direct acting anti-hepatitis C virus (HCV) agent that can withstand the viral mutation is needed. In this study, human single chain antibody variable fragments (HuscFvs) to conserved non-structural protein-5A (NS5A) of HCV were produced by phage display technology. Recombinant NS5A was used as bait for fishing-out the protein bound-phages from the HuscFv-phage display library. NS5A-bound HuscFvs produced by five phage transfected-E. coli clones were linked molecularly to nonaarginine (R9) for making them cell penetrable (become transbodies). The human monoclonal transbodies inhibited HCV replication in the HCVcc infected human hepatic cells and also rescued the cellular antiviral immune response from the viral suppression. Computerized simulation verified by immunoassays indicated that the transbodies used several residues in their multiple complementarity determining regions (CDRs) to form contact interface with many residues of the NS5A domain-I which is important for HCV replication complex formation and RNA binding as well as for interacting with several host proteins for viral immune evasion and regulation of cellular physiology. The human monoclonal transbodies have high potential for testing further as a new ramification of direct acting anti-HCV agent, either alone or in combination with their cognates that target other HCV proteins.


Subject(s)
Hepacivirus/metabolism , Single-Chain Antibodies/metabolism , Viral Nonstructural Proteins/metabolism , Virus Replication , Binding Sites , Cell Surface Display Techniques , Hepacivirus/drug effects , Hepacivirus/genetics , Hepatitis C/metabolism , Hepatitis C/prevention & control , Hepatitis C/virology , Humans , Peptide Library , Protein Binding , Single-Chain Antibodies/pharmacology , Viral Nonstructural Proteins/antagonists & inhibitors , Viral Nonstructural Proteins/genetics
3.
Biochim Biophys Acta ; 1838(1 Pt B): 319-27, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24120447

ABSTRACT

Bacillus thuringiensis Cry4Ba toxin is lethal to mosquito-larvae by forming ion-permeable pores in the target midgut cell membrane. Previously, the polarity of Asn(166) located within the α4-α5 loop composing the Cry4Ba pore-forming domain was shown to be crucial for larvicidal activity. Here, structurally stable-mutant toxins of both larvicidal-active (N166D) and inactive (N166A and N166I) mutants were FPLC-purified and characterized for their relative activities in liposomal-membrane permeation and single-channel formation. Similar to the 65-kDa trypsin-activated wild-type toxin, the N166D bio-active mutant toxin was still capable of releasing entrapped calcein from lipid vesicles. Conversely, the two other bio-inactive mutants showed a dramatic decrease in causing membrane permeation. When the N166D mutant was incorporated into planar lipid bilayers (under symmetrical conditions at 150mM KCl, pH8.5), it produced single-channel currents with a maximum conductance of about 425pS comparable to the wild-type toxin. However, maximum conductances for single K(+)-channels formed by both bio-inactive mutants (N166I and N166A) were reduced to approximately 165-205pS. Structural dynamics of 60-ns simulations of a trimeric α4-α5 pore model in a fully hydrated-DMPC system revealed that an open-pore structure could be observed only for the simulated pores of the wild type and N166D. Additionally, the number of lipid molecules interacting with both wild-type and N166D pores is relatively higher than those of N166A and N166I pores. Altogether, our results further signify that the polarity at the α4-α5 loop residue-Asn(166) is directly involved in ion permeation through the Cry4Ba toxin-induced ionic pore and pore opening at the membrane-water interface.


Subject(s)
Aedes/drug effects , Asparagine/chemistry , Bacillus thuringiensis/chemistry , Bacterial Proteins/chemistry , Endotoxins/chemistry , Hemolysin Proteins/chemistry , Pest Control, Biological , Aedes/growth & development , Alanine/chemistry , Alanine/genetics , Amino Acid Sequence , Animals , Asparagine/genetics , Aspartic Acid/chemistry , Aspartic Acid/genetics , Bacillus thuringiensis/metabolism , Bacillus thuringiensis/pathogenicity , Bacillus thuringiensis Toxins , Bacterial Proteins/genetics , Bacterial Proteins/pharmacology , Electric Conductivity , Endotoxins/genetics , Endotoxins/pharmacology , Escherichia coli/genetics , Escherichia coli/metabolism , Fluoresceins/chemistry , Hemolysin Proteins/genetics , Hemolysin Proteins/pharmacology , Ion Transport , Isoleucine/chemistry , Isoleucine/genetics , Larva/drug effects , Larva/growth & development , Liposomes/chemistry , Models, Molecular , Molecular Sequence Data , Permeability , Protein Structure, Secondary , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/pharmacology , Sequence Alignment
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