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1.
Graefes Arch Clin Exp Ophthalmol ; 258(12): 2701-2714, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32524240

ABSTRACT

PURPOSE: The objective of this study was to analyze the differences in blinking kinematics of spontaneous and voluntary blinks using for the first time a self-developed, non-invasive, and image processing-based method. METHODS: The blinks of 30 subjects were recorded for 1 min with the support of an eye-tracking device based on a high-speed infrared video camera, working at 250 frames per second, under two different experimental conditions. For the first condition, subjects were ordered to look in the straightforward position at a fixation target placed 1 m in front of them, with no further instructions. For the second, subjects were additionally asked to blink only following a sound signal every 6 s. RESULTS: Mean complete blinks increased by a factor of 1.7 from the spontaneous to the voluntary condition while mean incomplete blinks reduced significantly by a factor of 0.4. In both conditions, closing mean and peak velocities were always significantly greater and durations significantly lower than opening ones. When comparing the values for each condition, velocities and amplitudes for the voluntary condition were always greater than the corresponding values for spontaneous. CONCLUSION: Voluntary blinks revealed significant kinematic differences compared to spontaneous, thus supporting a different supranuclear pathway organization. This study presents a new method, based on image analysis, for the non-invasive kinematic characterization of blinking.


Subject(s)
Blinking , Image Processing, Computer-Assisted , Biomechanical Phenomena , Humans , Research Design
2.
Environ Microbiol ; 18(12): 4794-4816, 2016 12.
Article in English | MEDLINE | ID: mdl-27235544

ABSTRACT

The Fishing House located on the grounds of the Marquis of Pombal Palace, Oeiras, Portugal, was built in the 18th century. During this epoch, Portuguese gardens, such as the one surrounding the Fishing House, were commonly ornamented with glazed wall tile claddings. Currently, some of these outdoor tile panels are covered with dark colored biofilms, contributing to undesirable aesthetic changes and eventually inducing chemical and physical damage to the tile surfaces. Phylogenetic analyses revealed that the investigated biofilms are mainly composed of green algae, cyanobacteria and dematiaceous fungi. With the aim of mitigating biodeterioration, four different biocides (TiO2 nanoparticles, Biotin® T, Preventol® RI 80 and Albilex Biostat® ) were applied in situ to the glazed wall tiles. Their efficacy was monitored by visual examination, epifluorescence microscopy and DNA-based analysis. Significant changes in the microbial community composition were observed 4 months after treatment with Preventol® RI 80 and Biotin® T. Although the original community was inactivated after these treatments, an early stage of re-colonization was detected 6 months after the biocide application. TiO2 nanoparticles showed promising results due to their self-cleaning effect, causing the detachment of the biofilm from the tile surface, which remained clean 6 and even 24 months after biocide application. © 2013 Society for Applied Microbiology and John Wiley & Sons Ltd.


Subject(s)
Biofilms/classification , Ceramics , Disinfectants/pharmacology , Biofilms/drug effects , Chlorophyta/classification , Cyanobacteria/classification , Cyanobacteria/drug effects , Fungi/classification , Fungi/drug effects , Phylogeny , Portugal
3.
Sci Total Environ ; 550: 637-644, 2016 Apr 15.
Article in English | MEDLINE | ID: mdl-26849328

ABSTRACT

The presence of pesticides in surface and groundwater has grown considerably in the last decades as a consequence of the intensive farming activity. Several studies have shown the benefits of using organic amendments to prevent losses of pesticides from runoff or leaching. A particular soil from the Guadalquivir valley was placed in open air ponds and amended at 1 or 2% (w/w) with alperujo compost (AC), a byproduct from the olive oil industry. Tricyclazole dissipation, rice growth and microbial diversity were monitored along an entire rice growing season. An increase in the net photosynthetic rate of Oryza sativa plants grown in the ponds with AC was observed. These plants produced between 1100 and 1300kgha(-1) more rice than plants from the unamended ponds. No significant differences were observed in tricyclazole dissipation, monitored for a month in soil, surface and drainage water, between the amended and unamended ponds. The structure and diversity of bacteria and fungi communities were also studied by the use of the polymerase chain reaction denaturing gel electrophoresis (PCR-DGGE) from DNA extracted directly from soil samples. The banding pattern was similar for all treatments, although the density of bands varied throughout the time. Apparently, tricyclazole did not affect the structure and diversity of bacteria and fungi communities, and this was attributed to its low bioavailability. Rice cultivation under paddy field conditions may be more efficient under the effects of this compost, due to its positive effects on soil properties, rice yield, and soil microbial diversity.


Subject(s)
Environmental Restoration and Remediation/methods , Pesticides/analysis , Soil Microbiology , Soil Pollutants/analysis , Thiazoles/analysis , Agriculture , Fungi , Oryza , Pesticides/toxicity , Soil/chemistry , Soil Pollutants/toxicity , Thiazoles/toxicity , Waste Products
4.
Environ Sci Pollut Res Int ; 21(1): 473-84, 2014 Jan.
Article in English | MEDLINE | ID: mdl-23807558

ABSTRACT

Altamira Cave (north of Spain) contains one of the world's most prominent Paleolithic rock art paintings, which are threatened by a massive microbial colonization of ceiling and walls. Previous studies revealed that exchange rates between the cave and the external atmosphere through the entrance door play a decisive role in the entry and transport of microorganisms (bacteria and fungi) and nutrients to the interior of the cave. A spatial-distributed sampling and measurement of carrier (CO2) and trace (CH4) gases and isotopic signal of CO2 (δ(13)C) inside the cave supports the existence of a second connection (active gas exchange processes) with the external atmosphere at or near the Well Hall, the innermost and deepest area of the cave. A parallel aerobiological study also showed that, in addition to the entrance door, there is another connection with the external atmosphere, which favors the transport and increases microorganism concentrations in the Well Hall. This double approach provides a more complete knowledge on cave ventilation and revealed the existence of unknown passageways in the cave, a fact that should be taken into account in future cave management.


Subject(s)
Caves/microbiology , Environmental Monitoring/methods , Gases/analysis , Bacteria/growth & development , Carbon Isotopes/analysis , Fungi/growth & development , Fungi/physiology , Spain
5.
Hacia promoc. salud ; 18(2): 66-78, jul.-dic. 2013.
Article in Spanish | LILACS | ID: lil-703325

ABSTRACT

Objetivo: Identificar conocimientos y prácticas de gestantes y cuidadores de menores de dos años sobre lactancia materna, residentes en cinco municipios caldenses con las mayores tasas de mortalidad materna y prevalencia de bajo peso al nacer en 2011. Materiales y Métodos: Estudio descriptivo transversal con abordaje cualitativo y cuantitativo en 31 gestantes, 90 madres lactantes y 14 cuidadores de menores de dos años que asistían a instituciones y programas en los distintos niveles de atención en salud de Marulanda, Risaralda, Pácora, Manizales y Palestina. Las variables fueron: municipio de residencia, estrato socioeconómico, edad de madres o cuidadores, nivel de escolaridad de madres o cuidadores, ocupación de cuidadores, parentesco de cuidadores con el usuario FAMI, estado civil y conocimientos y prácticas sobre lactancia materna. Resultados: Los participantes concordaron en el valor y beneficios de la lactancia materna tanto para el bebé como para la madre. Las mayores distorsiones entre conocimientos y prácticas se encontraron en el tiempo adecuado para amamantar exclusivamente al bebé, en las técnicas de amamantamiento, en el proceso de destete y en los alimentos que según ellos ayudan a bajar la leche. Plantearon también que se debe amamantar durante seis meses sin incluir otros alimentos, aunque en la práctica no se cumple por diversas razones. Conclusiones: Los hallazgos de este estudio respaldan todavía más el papel clave que juegan el personal de salud y las instituciones de atención del parto para promover la lactancia materna exclusiva mediante la educación sobre técnicas exitosas de amamantamiento...


Subject(s)
Female , Pregnancy , Infant , Breast Feeding , Clinical Competence , Qualitative Research , Weaning
6.
J Clin Microbiol ; 51(2): 696-700, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23224088

ABSTRACT

We report the first case of cerebral abscess due to a novel species of Nocardia in a heart transplant patient and describe the antimicrobial susceptibility of this isolate. As our patient was intolerant to trimethoprim-sulfamethoxazole, we also discuss alternative therapeutic options in brain abscess due to Nocardia sp.


Subject(s)
Brain Abscess/microbiology , Immunocompromised Host , Nocardia Infections/microbiology , Nocardia/classification , Nocardia/genetics , Adult , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Brain Abscess/diagnosis , Brain Abscess/drug therapy , Female , Genes, Bacterial , Heart Transplantation/adverse effects , Humans , Microbial Sensitivity Tests , Molecular Sequence Data , Nocardia/drug effects , Nocardia Infections/diagnosis , Nocardia Infections/drug therapy , Phylogeny
7.
Environ Microbiol Rep ; 4(6): 596-603, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23760930

ABSTRACT

In the last few years, geomicrobiologists have focused their researches on the nature and origin of enigmatic reticulated filaments reported in modern and fossil samples from limestone caves and basalt lava tubes. Researchers have posed questions on these filaments concerning their nature, origin, chemistry, morphology, mode of formation and growth. A tentative microbial origin has been elusive since these filaments are found as hollow tubular sheaths and could not be affiliated to any known microorganism. We describe the presence of similar structures in a 16th century granite tunnel in Porto, Northwest Portugal. The reticulated filaments we identify exhibit fine geometry surface ornamentation formed by cross-linked Mn-rich nanofibres, surrounded by a large amount of extracellular polymeric substances. Within these Mn-rich filaments we report for the first time the occurrence of microbial cells.

8.
Sci Total Environ ; 408(17): 3711-5, 2010 Aug 01.
Article in English | MEDLINE | ID: mdl-20595060

ABSTRACT

During the restoration of the church of "San Esteban" in Cuéllar (Segovia, Spain) a few sepulchres were opened. Among them was that of Doña Isabel de Zuazo, from the 16th century. Together with the corpse was found a series of printed documents from the 15th-16th centuries, most of which were bulls of indulgence. A microbiological study of the documents was carried out using techniques of isolation and molecular microbiology, together with scanning electron microscopy. Most of the identified bacteria were highly suggestive of a human origin, particularly the predominance of Clostridium species consistent with the flora of the human intestinal tract. Our results demonstrate that appreciable post-mortem migration of bacteria has taken place from the corpse to the historic documents. This can be explained considering that the documents were found on pelvic region, and were contaminated by body fluids and putrefaction.


Subject(s)
Bacteria/classification , Bacteria/genetics , Bacteria/isolation & purification , Bacterial Typing Techniques , Cadaver , Catholicism/history , Forensic Anthropology , History, 15th Century , History, 16th Century , Publications/history
9.
Sci Total Environ ; 408(17): 3632-8, 2010 Aug 01.
Article in English | MEDLINE | ID: mdl-20553941

ABSTRACT

Castañar de Ibor Cave (Spain) was discovered in 1967 and declared a Natural Monument in 1997. In 2003 the cave was opened to public visits. Despite of extensive control, on 26 August 2008 the cave walls and sediments appeared colonized by long, white fungal mycelia. This event was the result of an accidental input of detritus on the afternoon of 24 August 2008. We report here a fungal outbreak initiated by Mucor circinelloides and Fusarium solani and the methods used to control it.


Subject(s)
Environmental Monitoring , Fungi/growth & development , Geologic Sediments/microbiology , Chaetomium/growth & development , Chaetomium/isolation & purification , Cladosporium/growth & development , Cladosporium/isolation & purification , Fungi/classification , Fungi/isolation & purification , Fusarium/growth & development , Fusarium/isolation & purification , Geological Phenomena , Mucorales/growth & development , Mucorales/isolation & purification , Penicillium/growth & development , Penicillium/isolation & purification
10.
Microbiology (Reading) ; 156(Pt 3): 644-652, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20056706

ABSTRACT

Lascaux Cave (Montignac, France) contains paintings from the Upper Paleolithic period. Shortly after its discovery in 1940, the cave was seriously disturbed by major destructive interventions. In 1963, the cave was closed due to algal growth on the walls. In 2001, the ceiling, walls and sediments were colonized by the fungus Fusarium solani. Later, black stains, probably of fungal origin, appeared on the walls. Biocide treatments, including quaternary ammonium derivatives, were extensively applied for a few years, and have been in use again since January 2008. The microbial communities in Lascaux Cave were shown to be composed of human-pathogenic bacteria and entomopathogenic fungi, the former as a result of the biocide selection. The data show that fungi play an important role in the cave, and arthropods contribute to the dispersion of conidia. A careful study on the fungal ecology is needed in order to complete the cave food web and to control the black stains threatening the Paleolithic paintings.


Subject(s)
Ecosystem , Fusarium/growth & development , Paintings , Bacteria/growth & development , Disinfectants/pharmacology , Eukaryota/growth & development , France , Fungi/growth & development , Geological Phenomena , Humans , Microclimate , Paleontology , Quaternary Ammonium Compounds/pharmacology
13.
Naturwissenschaften ; 96(1): 71-9, 2009 Jan.
Article in English | MEDLINE | ID: mdl-18953520

ABSTRACT

In the last few years, the microbial colonisation of mural paintings in ancient monuments has been attracting the attention of microbiologists and conservators. The genus Rubrobacter is commonly found in biodeteriorated monuments, where it has been reported to cause rosy discolouration. However, to date, only three species of this genus have been isolated, all from thermophilic environments. In this paper, we studied three monuments: the Servilia and Postumio tombs in the Roman Necropolis of Carmona (Spain), and Vilar de Frades church (Portugal), in search of Rubrobacter strains. In all cases, biodeterioration and the formation of efflorescences were observed, and five Rubrobacter strains were isolated. These isolates showed different physiology and migration in denaturing gradient gel electrophoresis, suggesting they might represent new species within this genus. The isolates reproduced some biodeterioration processes in the laboratory and revealed their biomediation in crystal formation.


Subject(s)
Actinobacteria/genetics , Actinobacteria/isolation & purification , Architecture , Funeral Rites/history , Roman World , Actinobacteria/classification , DNA Primers , DNA, Bacterial/isolation & purification , History, Ancient , Phylogeny , RNA, Bacterial/genetics , RNA, Bacterial/isolation & purification , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 16S/isolation & purification
14.
J Chromatogr A ; 1147(1): 79-84, 2007 Apr 13.
Article in English | MEDLINE | ID: mdl-17320890

ABSTRACT

The formation of dark patinas has been mainly related with deposition of gases and particles, and sulphation mechanisms particularly in calcareous rocks. However, in granitic monuments located in Galicia (northwest of Spain), especially in rural areas, this origin is unlikely since granite is a very poor calcium-containing rock and the atmospheric pollution in this area is negligible. A biological origin seems to be most probable. In order to know the importance of biological and atmospheric factors in the formation of dark patinas on granitic monuments, a number of analyses using several techniques are needed. The characterization of fatty acids in patinas by gas chromatography has established clear differences among samples. Thus, all of the samples having a biological origin displayed a similar fatty acid pattern, with unsaturated fatty acids predominating, especially oleic and linoleic acids; these were followed in abundance by the branched fatty acid 18:00 anteiso, and palmitic acid. Different patterns of fatty acid allowed establishment of an anthropogenic origin of the some of the patinas analysed.


Subject(s)
Chromatography, Gas/methods , Construction Materials/analysis , Culture , Fatty Acids, Nonesterified/analysis , Fatty Acids, Unsaturated/analysis , Materials Testing , Silicon Dioxide/chemistry , Art , Environmental Exposure/analysis , Environmental Monitoring/methods , Linoleic Acids , Oleic Acids , Palmitic Acid , Spain , Surface Properties
15.
Int J Syst Evol Microbiol ; 55(Pt 4): 1487-1490, 2005 Jul.
Article in English | MEDLINE | ID: mdl-16014469

ABSTRACT

Two strains were isolated from tuff, a volcanic rock that forms the walls of the Roman Catacombs of Saint Callixtus in Rome, Italy. A polyphasic approach using nutritional and physiological tests, reactions to antibiotics, fatty acid profiles, DNA base ratios, DNA-DNA reassociation and 16S rRNA gene sequence comparisons showed that the two isolates belong to a novel species within the genus Phyllobacterium. The species Phyllobacterium catacumbae sp. nov. is proposed. The type strain is CSC19(T) (=CECT 5680(T)=LMG 22520(T)).


Subject(s)
Alphaproteobacteria/classification , Alphaproteobacteria/isolation & purification , Geologic Sediments/microbiology , Mortuary Practice , Alphaproteobacteria/genetics , Alphaproteobacteria/physiology , Bacterial Typing Techniques , DNA, Bacterial/analysis , DNA, Ribosomal/analysis , Genes, rRNA , History, Ancient , Italy , Molecular Sequence Data , Phenotype , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Species Specificity
16.
Int J Syst Evol Microbiol ; 54(Pt 5): 1553-1556, 2004 Sep.
Article in English | MEDLINE | ID: mdl-15388709

ABSTRACT

The taxonomic position of Agromyces fucosus subsp. hippuratus is revised on the basis of molecular and phenotypic data. Phylogenetic analysis based on 16S rRNA gene sequences, DNA-DNA relatedness values and differences from other species in phenotypic traits revealed in this and earlier studies suggested reclassification of A. fucosus subsp. hippuratus as a separate species, Agromyces hippuratus sp. nov., comb. nov. The type strain is VKM Ac-1352T (= JCM 9087T). An emended description of Agromyces fucosus is given.


Subject(s)
Actinomycetales/classification , Actinomycetales/genetics , Cell Wall/chemistry , DNA, Bacterial/chemistry , DNA, Bacterial/isolation & purification , DNA, Ribosomal/chemistry , DNA, Ribosomal/isolation & purification , Fatty Acids/analysis , Fatty Acids/isolation & purification , Genes, rRNA , Molecular Sequence Data , Nucleic Acid Hybridization , Phylogeny , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Teichoic Acids/chemistry
18.
Environ Microbiol ; 4(10): 617-20, 2002 Oct.
Article in English | MEDLINE | ID: mdl-12366757

ABSTRACT

The holy water fonts from the churches of Seville, Spain have a strong bacterial contamination. Coliforms, Enterobacteriaceae and other pathogenic bacteria are widely represented in the fonts investigated. Thirty out of the 37 different species isolated from holy waters are known human pathogens. The high bacterial contamination is related to human skin transmission and, probably, to misuse of the water.


Subject(s)
Bacteria/isolation & purification , Catholicism , Water Microbiology , Sodium Chloride/chemistry
19.
An Med Interna ; 15(12): 661-3, 1998 Dec.
Article in Spanish | MEDLINE | ID: mdl-9972604

ABSTRACT

Alveolar hemorrhage in mixed cryoglobulinemia associated with hepatitis C virus infection. A 61 year-old woman with type II mixed cryoglobulinemia associated to hepatitis C virus infection has suffered alveolar hemorrhage with multiple pulmonary infiltrates, purpura, glomerulonephritis and polyneuropathy. The respiratory and kidney findings resolved with prednisone, but glomerulonephritis reappeared when interferon-alpha treatment was started and prednisone was reduced. This is the third case of alveolar hemorrhage and glomerulonephritis associated with mixed cryoglobulinemia reported in the literature. The lung involvement in mixed cryoglobulinemia is reviewed. The clinic manifestations (asthma, pleural effusion, hemoptysis or pulmonary fibrosis) are uncommon, but the lung involvement is very frequent if roentgenographic signs and necropsy findings are assessed.


Subject(s)
Anti-Glomerular Basement Membrane Disease/etiology , Cryoglobulinemia/complications , Hepatitis C/complications , Anti-Glomerular Basement Membrane Disease/diagnosis , Anti-Glomerular Basement Membrane Disease/diagnostic imaging , Anti-Inflammatory Agents/therapeutic use , Bronchoalveolar Lavage Fluid , Cryoglobulinemia/drug therapy , Female , Hemorrhage/etiology , Humans , Middle Aged , Prednisone/therapeutic use , Pulmonary Alveoli , Radiography, Thoracic
20.
Arch Bronconeumol ; 33(9): 475-7, 1997 Oct.
Article in Spanish | MEDLINE | ID: mdl-9424266

ABSTRACT

Gastric tuberculosis is a rare entity that often coincides with pulmonary involvement at the time of diagnosis. Many cases reported in developed countries are in immunodepressed patients, particularly those with HIV infection. We report the case of a 43-year-old man who presented with weight loss of 14 kg, persistent vomiting and bilateral pulmonary nodes measuring 1.5 to 3 cm in diameter. An ulcerous, hypertrophic gastric lesion was observed by oral digestive endoscopy, such that the clinical, radiologic and endoscopic profile initially suggested gastric neoplasia with bilateral pulmonary metastasis. Examination of the gastric biopsy and of the bronchial aspirate revealed the presence of acid-alcohol resistant bacilli; a culture in Löwenstein-Jenssen medium was positive for Mycobacterium tuberculosis. The patient responded satisfactorily to short-term specific treatment with three drugs.


Subject(s)
Immunocompetence , Stomach Diseases/diagnosis , Tuberculosis, Gastrointestinal/diagnosis , Adult , Antitubercular Agents/therapeutic use , Drug Therapy, Combination , Humans , Male , Stomach Diseases/drug therapy , Tuberculoma/diagnosis , Tuberculoma/drug therapy , Tuberculosis, Gastrointestinal/drug therapy , Tuberculosis, Pulmonary/diagnosis , Tuberculosis, Pulmonary/drug therapy
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