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1.
Tsitol Genet ; 49(2): 11-5, 2015.
Article in Russian | MEDLINE | ID: mdl-26030968

ABSTRACT

The collections of varieties of spring barley cultivars from the Eastern European and Central Asian areas were analyzed by exonpecific PCR (EPIC) for beta-amylase genes. The endosperm beta-amylase gene (bamyl) was differentiated by the presence of 126 bp MITE insertion into intron 3 that is associated with low activity beta-amylase. The findings suggest that a low level of genetic variation for bamylgene within climatic zones is associated with individual breeding program for each climatic zone.


Subject(s)
Alleles , Endosperm/genetics , Gene Expression Regulation, Plant , Hordeum/genetics , Plant Proteins/genetics , beta-Amylase/genetics , Breeding , Endosperm/metabolism , Exons , Genetic Variation , Hordeum/metabolism , Humans , Introns , Mutagenesis, Insertional , Plant Proteins/metabolism , Siberia , beta-Amylase/metabolism
2.
Genetika ; 46(1): 44-50, 2010 Jan.
Article in Russian | MEDLINE | ID: mdl-20198878

ABSTRACT

Species-specific LTR retrotransposons were first cloned in five rare relic species of drug plants located in the Perm' region. Sequences of LTR retrotransposons were used for PCR analysis based on amplification of repeated sequences from LTR or other sites of retrotransposons (IRAP). Genetic diversity was studied in six populations of rare relic species of plants Adonis vernalis L. by means of the IRAP method; 125 polymorphic IRAP-markers were analyzed. Parameters for DNA polymorphism and genetic diversity of A. vernalis populations were determined.


Subject(s)
Genes, Plant , Genetic Variation , Plants, Medicinal/genetics , Retroelements/genetics , Cloning, Molecular , DNA Primers/chemistry , DNA Primers/genetics , Genetic Markers , Polymerase Chain Reaction/methods , Species Specificity , Terminal Repeat Sequences/genetics
3.
Tsitol Genet ; 40(3): 24-33, 2006.
Article in Russian | MEDLINE | ID: mdl-16933849

ABSTRACT

Application of polylocus biallelic systems of PCR along with monolocus SSR-analysis is very promising approach for detailed characterization, differentiation and identification of crop varieties. Microsatellite sequences and LTR retratransposon fragments are known to be the most variable in plant genome. They can be used in PCR analysis as IRAP and REMAP. Conditions of IRAP and REMAP analyses of intra- and intervariety polymorphism of the barley varieties of Odessa breeding have been elaborated. The detailed genotype formulas are represented which reflect the intravariety polimorphism and make it possible to detect the changes in variety structure in the course of seed production process.


Subject(s)
Hordeum/genetics , Microsatellite Repeats/genetics , Polymorphism, Genetic , Retroelements/genetics , DNA Primers , DNA, Plant/analysis , Hordeum/growth & development , Plant Shoots/genetics , Plant Shoots/growth & development , Polymerase Chain Reaction , Ukraine
4.
Tsitol Genet ; 34(4): 41-9, 2000.
Article in Russian | MEDLINE | ID: mdl-11033856

ABSTRACT

A map of the barley genome consisting of 107 loci was constructed using double haploid lines. 33 RAPD loci marks all barley chromosomes. The total length of the obtained map is 1047 centiMorgans (cM) with a 9.8 cM average distance between markers. 7 linkage groups was identified as certain chromosomes. The distribution of the markers was analyzed, comparison with other published maps was made. Some statistical considerations are presented. Alternative strategies of gene mapping are considered.


Subject(s)
Chromosome Mapping/methods , Genome, Plant , Haploidy , Hordeum/genetics , Chromosome Mapping/statistics & numerical data , Crosses, Genetic , DNA, Plant/genetics , Random Amplified Polymorphic DNA Technique/methods , Random Amplified Polymorphic DNA Technique/statistics & numerical data
5.
Genetika ; 31(10): 1358-64, 1995 Oct.
Article in Russian | MEDLINE | ID: mdl-8543139

ABSTRACT

Genetics and breeding studies require effective methods for polymorphism analysis that allow one to classify varieties and to determine phylogenetic interactions between plant species. A variant of the polymerase chain reaction for DNA amplification with arbitrary primers (RAPD) was used to determine genetic distances between Hordeum vulgare varieties and to integrate of the varieties into groups. The dendrogram of relations between species from the genus Hordeum and species of some cultivated cereals was constructed on the basis of RAPD analysis.


Subject(s)
DNA Primers , Hordeum/genetics , Polymorphism, Genetic , Random Amplified Polymorphic DNA Technique , Base Sequence , Molecular Sequence Data , Selection, Genetic
6.
Tsitol Genet ; 28(6): 54-61, 1994.
Article in Russian | MEDLINE | ID: mdl-7701604

ABSTRACT

Polymerase chain reaction of DNA amplification with the use of random primers is a new approach in investigations of genome specificity. Nucleotide sequences that showed polymorphism in RFLP analysis were used as primers. Optimal temperature conditions and Mg2+ concentrations were determined for studying inter- and intraspecific DNA polymorphism in the most important cereals.


Subject(s)
DNA Primers/genetics , Edible Grain/genetics , Polymerase Chain Reaction/methods , Polymorphism, Genetic/genetics , Base Sequence , DNA, Plant/genetics , Molecular Sequence Data , Species Specificity
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