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1.
Gynecol Oncol ; 134(3): 599-606, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24995579

ABSTRACT

PURPOSE: Our previously reported 29-gene expression signature identified an aggressive subgroup of endometrial cancer patients with PI3K activation. We here wanted to validate these findings by independent patient series. PATIENTS AND METHODS: The 29-gene expression signature was assessed in fresh frozen tumor tissue from 280 primary endometrial carcinomas (three independent cohorts), 19 metastatic lesions and in 333 primary endometrial carcinomas using TCGA data, and expression was related to clinico-pathologic features and survival. The 29-gene signature was assessed by real-time quantitative PCR, DNA oligonucleotide microarrays, or RNA sequencing. PI3K alterations were assessed by immunohistochemistry, DNA microarrays, DNA sequencing, SNP arrays or fluorescence in situ hybridization. A panel of markers of epithelial-mesenchymal transition (EMT) was also correlated to the 29-gene signature score. RESULTS: High 29-gene Endometrial Carcinoma Recurrence Score (ECARS) values consistently validated to identify patients with aggressive clinico-pathologic phenotype and reduced survival. Within the presumed favorable subgroups of low grade, endometrioid tumors confined to the uterus, high ECARS still predicted a poor prognosis. The score was higher in metastatic compared to primary lesions (P<0.001) and was significantly associated with potential measures of PI3K activation, markers of EMT and vascular invasion as an indicator of metastatic spread (all P<0.001). CONCLUSIONS: ECARS validates to identify aggressive endometrial carcinomas in multiple, independent patients cohorts. The higher signature score in metastatic compared to primary lesions, and the potential link to PI3K activation and EMT, support further studies of ECARS in relation to response to PI3K and EMT inhibitors in clinical trials of metastatic endometrial carcinoma.


Subject(s)
Endometrial Neoplasms/genetics , Endometrial Neoplasms/pathology , Epithelial-Mesenchymal Transition , Neoplasm Recurrence, Local/genetics , Neoplasm Recurrence, Local/pathology , Phosphatidylinositol 3-Kinases/genetics , Biomarkers, Tumor , Endometrial Neoplasms/epidemiology , Female , Humans
2.
Br J Cancer ; 111(1): 78-84, 2014 Jul 08.
Article in English | MEDLINE | ID: mdl-24853175

ABSTRACT

BACKGROUND: Recent identification of a specific role of HSF1 in cancer progression has led to new relevance of HSF1 as both a prognostic and a predictive marker. The role of HSF1 in endometrial cancer has so far been unexplored. METHODS: A total of 823 lesions from endometrial carcinoma precursors, primary tumours and metastases were prospectively collected and explored for HSF1 protein expression in relation to established markers for aggressive disease and survival. Transcriptional alterations related to HSF1 protein level were investigated by microarray analysis for 224 freshly frozen samples in parallel. RESULTS: High expression of HSF1 protein in endometrial carcinoma is significantly associated with aggressive disease and poor survival (all P-values ≤ 0.02), also among ERα-positive patients presumed to have good prognosis. The HSF1-related gene signatures increase during disease progression and were also found to have prognostic value. Gene expression analyses identified HSP90 inhibition as a potential novel therapeutic approach for cases with high protein expression of HSF1. CONCLUSIONS: We demonstrate for the first time in endometrial cancer that high expression of HSF1 and measures for transcriptional activation of HSF1 associate with poor outcome and disease progression. The HSP90 inhibitors are suggested as new targeted therapeutics for patients with high HSF1 levels in tumour in particular.


Subject(s)
Biomarkers, Tumor/biosynthesis , DNA-Binding Proteins/biosynthesis , Endometrial Neoplasms/metabolism , HSP90 Heat-Shock Proteins/antagonists & inhibitors , Transcription Factors/biosynthesis , Aged , Biomarkers, Tumor/genetics , Cell Nucleus/genetics , Cell Nucleus/metabolism , DNA-Binding Proteins/genetics , Endometrial Neoplasms/drug therapy , Endometrial Neoplasms/genetics , Endometrial Neoplasms/pathology , Female , Gene Expression , HSP90 Heat-Shock Proteins/metabolism , Heat Shock Transcription Factors , Humans , Immunohistochemistry , Microarray Analysis , Prognosis , Transcription Factors/genetics , Transcriptome
3.
Cell Prolif ; 46(5): 554-62, 2013 Oct.
Article in English | MEDLINE | ID: mdl-24073609

ABSTRACT

OBJECTIVES: Proliferative capacity of acute myelogenous leukaemia (AML) blasts is important for leukaemogenesis, and we have investigated whether proliferative capacity of primary human AML cells could be used for subclassification of patients. MATERIALS AND METHODS: In vitro proliferative capacity of AML cells derived from two independent groups was investigated. Cells were cultured under highly standardized conditions and proliferation assayed by (3) H-thymidine incorporation after seven days culture. Patients were subclassified by clustering models, and gene expression profile was examined by microarray analyses. RESULTS: Based on proliferative capacity of the AML cells, three different patient clusters were identified: (i) autocrine proliferation that was increased by exogenous cytokines; (ii) detectable proliferation only in presence of exogenous cytokines; and (iii) low or undetectable proliferation even in presence of exogenous cytokines. Patients with highest proliferative capacity cells had no favourable prognostic impact by NPM-1 mutation. Analysis of gene expression profiles showed that the most proliferative cells generally had altered expression of genes involved in regulation of transcription/RNA functions, whereas patients with high proliferative capacity and internal tandem duplications (ITDs) in the FLT3 cytokine receptor gene had altered expression of several molecules involved in cytoplasmic signal transduction. CONCLUSIONS: In vitro proliferative capacity of primary human AML cells was considerably variable between patients and could be used to identify biologically distinct patient subsets.


Subject(s)
Cytokines/pharmacology , Leukemia, Myeloid, Acute/metabolism , Transcriptome/drug effects , Adult , Aged , Aged, 80 and over , Autocrine Communication/drug effects , Cell Proliferation/drug effects , Cluster Analysis , Computational Biology , Female , Gene Duplication , Humans , Leukemia, Myeloid, Acute/genetics , Leukemia, Myeloid, Acute/pathology , Male , Middle Aged , Mutation , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Nucleophosmin , Signal Transduction/drug effects , Tumor Cells, Cultured , fms-Like Tyrosine Kinase 3/genetics , fms-Like Tyrosine Kinase 3/metabolism
4.
Br J Cancer ; 107(12): 1997-2004, 2012 Dec 04.
Article in English | MEDLINE | ID: mdl-23099803

ABSTRACT

BACKGROUND: Three quarter of endometrial carcinomas are treated at early stage. Still, 15 to 20% of these patients experience recurrence, with little effect from systemic therapies. Homo sapiens v-Ki-ras2 Kirsten rat sarcoma viral oncogenes homologue (KRAS) mutations have been reported to have an important role in tumorigenesis for human cancers, but there is limited knowledge regarding clinical relevance of KRAS status in endometrial carcinomas. METHODS: We have performed a comprehensive and integrated characterisation of genome-wide expression related to KRAS mutations and copy-number alterations in primary- and metastatic endometrial carcinoma lesions in relation to clinical and histopathological data. A primary investigation set and clinical validation set was applied, consisting of 414 primary tumours and 61 metastatic lesions totally. RESULTS: Amplification and gain of KRAS present in 3% of the primary lesions and 18% of metastatic lesions correlated significantly with poor outcome, high International Federation of Gynaecology and Obstetrics stage, non-endometrioid subtype, high grade, aneuploidy, receptor loss and high KRAS mRNA levels, also found to be associated with aggressive phenotype. In contrast, KRAS mutations were present in 14.7% of primary lesions with no increase in metastatic lesions, and did not influence outcome, but was significantly associated with endometrioid subtype, low grade and obesity. CONCLUSION: These results support that KRAS amplification and KRAS mRNA expression, both increasing from primary to metastatic lesions, are relevant for endometrial carcinoma disease progression.


Subject(s)
Endometrial Neoplasms/genetics , Endometrial Neoplasms/pathology , Gene Amplification , Gene Dosage , Genes, ras/genetics , Mutation , Proto-Oncogene Proteins/genetics , ras Proteins/genetics , Adult , Aged , Endometrial Neoplasms/metabolism , Endometrial Neoplasms/mortality , Female , Gene Expression Regulation, Neoplastic , Humans , Immunohistochemistry , Lymphatic Metastasis , Middle Aged , Neoplasm Grading , Oligonucleotide Array Sequence Analysis , Phenotype , Polymerase Chain Reaction , Predictive Value of Tests , Prognosis , Proto-Oncogene Proteins p21(ras) , Sequence Analysis, DNA , Tissue Array Analysis , Up-Regulation
5.
Br J Cancer ; 106(10): 1682-8, 2012 May 08.
Article in English | MEDLINE | ID: mdl-22415229

ABSTRACT

BACKGROUND: The G protein-coupled oestrogen receptor, GPER, has been suggested as an alternative oestrogen receptor. Our purpose was to investigate the potential of GPER as a prognostic and predictive marker in endometrial carcinoma and to search for new drug candidates to improve treatment of aggressive disease. MATERIALS AND METHOD: A total of 767 primary endometrial carcinomas derived from three patient series, including an external dataset, were studied for protein and mRNA expression levels to investigate and validate if GPER loss identifies poor prognosis and new targets for therapy in endometrial carcinoma. Gene expression levels, according to ERα/GPER status, were used to search the connectivity map database for small molecular inhibitors with potential for treatment of metastatic disease for receptor status subgroups. RESULTS: Loss of GPER protein is significantly correlated with low GPER mRNA, high FIGO stage, non-endometrioid histology, high grade, aneuploidy and ERα loss (all P-values ≤0.05). Loss of GPER among ERα-positive patients identifies a subgroup with poor prognosis that until now has been unrecognised, with reduced 5-year survival from 93% to 76% (P=0.003). Additional loss of GPER from primary to metastatic lesion counterparts further supports that loss of GPER is associated with disease progression. CONCLUSION: These results support that GPER status adds clinically relevant information to ERα status in endometrial carcinoma and suggest a potential for new inhibitors in the treatment of metastatic endometrial cancers with ERα expression and GPER loss.


Subject(s)
Endometrial Neoplasms/drug therapy , Estrogen Receptor alpha/analysis , Receptors, Estrogen/physiology , Receptors, G-Protein-Coupled/physiology , Adult , Aged , Endometrial Neoplasms/chemistry , Endometrial Neoplasms/mortality , Endometrial Neoplasms/pathology , Female , Histone Deacetylase Inhibitors/therapeutic use , Humans , Middle Aged , Receptors, Estrogen/analysis , Receptors, Estrogen/genetics , Receptors, G-Protein-Coupled/analysis , Receptors, G-Protein-Coupled/genetics , Treatment Outcome
6.
Br J Cancer ; 104(6): 921-6, 2011 Mar 15.
Article in English | MEDLINE | ID: mdl-21343929

ABSTRACT

BACKGROUND: Endometrial cancer incidence is increasing in industrialised countries. High body mass index (BMI, kg m(-2)) is associated with higher risk for disease. We wanted to investigate if BMI is related to clinico-pathological characteristics, hormone receptor status in primary tumour, and disease outcome in endometrial cancer. PATIENTS AND METHODS: In total, 1129 women primarily treated for endometrial carcinoma at Haukeland University Hospital during 1981-2009 were studied. Body mass index was available for 949 patients and related to comprehensive clinical and histopathological data, hormone receptor status in tumour, treatment, and follow-up. RESULTS: High BMI was significantly associated with low International Federation of Gynaecology and Obstetrics (FIGO) stage, endometrioid histology, low/intermediate grade, and high level of progesterone receptor (PR) mRNA by qPCR (n=150; P=0.02) and protein expression by immunohistochemistry (n=433; P=0.003). In contrast, oestrogen receptor (ERα) status was not associated with BMI. Overweight/obese women had significantly better disease-specific survival (DSS) than normal/underweight women in univariate analysis (P=0.035). In multivariate analysis of DSS adjusting for age, FIGO stage, histological subtype, and grade, BMI showed no independent prognostic impact. CONCLUSION: High BMI was significantly associated with markers of non-aggressive disease and positive PR status in a large population-based study of endometrial carcinoma. Women with high BMI had significantly better prognosis in univariate analysis of DSS, an effect that disappeared in multivariate analysis adjusting for established prognostic markers. The role of PR in endometrial carcinogenesis needs to be further studied.


Subject(s)
Body Mass Index , Carcinoma, Endometrioid/pathology , Endometrial Neoplasms/pathology , Receptors, Progesterone/analysis , Adult , Aged , Aged, 80 and over , Biomarkers, Tumor/analysis , Biomarkers, Tumor/metabolism , Carcinoma, Endometrioid/diagnosis , Carcinoma, Endometrioid/epidemiology , Carcinoma, Endometrioid/metabolism , Disease Progression , Endometrial Neoplasms/diagnosis , Endometrial Neoplasms/epidemiology , Endometrial Neoplasms/metabolism , Female , Follow-Up Studies , Humans , Immunohistochemistry , Middle Aged , Neoplasm Invasiveness , Neoplasm Staging , Prognosis , Receptors, Progesterone/metabolism , Retrospective Studies
7.
Neuropathol Appl Neurobiol ; 35(4): 380-93, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19508445

ABSTRACT

AIMS: Cancer stem-like cells might have important functions in chemoresistance. We have developed a model where highly infiltrative brain tumours with a stem-like phenotype were established by orthotopic transplantation of human glioblastomas to immunodeficient rats. Serial passaging gradually transformed the tumours into a less invasive and more angiogenic phenotype (high-generation tumours). The invasive phenotype (low-generation tumours) was characterized by an increase in stem cell markers and increased phosphorylation of kinases in the phosphatidylinositol 3-kinase (PI3K)/AKT pathway. These markers were reduced in the serially passaged vascular tumours. The present study was aimed at investigating how the two phenotypes responded in vitro to doxorubicin, a clinically potent cytotoxic drug for solid tumours. METHODS: Biopsy spheroids were implanted and passaged intracranially in nude rats. Gene expression and protein analyses were performed, and drug sensitivity was assessed. RESULTS: Microarray analysis revealed gene ontology categories connected to developmental aspects and negative regulators of differentiation, especially in the infiltrative stem cell-like tumours. The highly invasive stem-like phenotype was chemoresistant compared with the angiogenic phenotype. By interfering with the PI3K it was possible to sensitize tumour spheroids to chemotherapy. Real-time quantitative polymerase chain reaction showed downregulation of the stem cell markers Nestin and Musashi-1 in low-generation biopsy spheroids following PI3K inhibition. CONCLUSIONS: Highly invasive tumours with a stem-like phenotype are more chemoresistant than angiogenic tumours derived from the same patients. We suggest that treatment resistance in glioblastomas can be related to PI3K/AKT activity in stem-like tumour cells, and that targeted interference with the PI3K/AKT pathway might differentiate and sensitize this subpopulation to chemotherapy.


Subject(s)
Brain Neoplasms/drug therapy , Brain Neoplasms/physiopathology , Glioblastoma/drug therapy , Glioblastoma/physiopathology , Stem Cells/physiology , Animals , Antineoplastic Agents/pharmacology , Brain/drug effects , Brain/physiopathology , Chromones/pharmacology , Doxorubicin/pharmacology , Enzyme Inhibitors/pharmacology , Glycogen Synthase Kinase 3/metabolism , Humans , Intermediate Filament Proteins/metabolism , Morpholines/pharmacology , Neoplasm Transplantation , Nerve Tissue Proteins/metabolism , Nestin , Phenotype , Phosphatidylinositol 3-Kinases/metabolism , Phosphoinositide-3 Kinase Inhibitors , Phosphorylation , RNA, Messenger/metabolism , RNA-Binding Proteins/metabolism , Rats , Rats, Nude
8.
Proc Natl Acad Sci U S A ; 106(12): 4834-9, 2009 Mar 24.
Article in English | MEDLINE | ID: mdl-19261849

ABSTRACT

Although 75% of endometrial cancers are treated at an early stage, 15% to 20% of these recur. We performed an integrated analysis of genome-wide expression and copy-number data for primary endometrial carcinomas with extensive clinical and histopathological data to detect features predictive of recurrent disease. Unsupervised analysis of the expression data distinguished 2 major clusters with strikingly different phenotypes, including significant differences in disease-free survival. To identify possible mechanisms for these differences, we performed a global genomic survey of amplifications, deletions, and loss of heterozygosity, which identified 11 significantly amplified and 13 significantly deleted regions. Amplifications of 3q26.32 harboring the oncogene PIK3CA were associated with poor prognosis and segregated with the aggressive transcriptional cluster. Moreover, samples with PIK3CA amplification carried signatures associated with in vitro activation of PI3 kinase (PI3K), a signature that was shared by aggressive tumors without PIK3CA amplification. Tumors with loss of PTEN expression or PIK3CA overexpression that did not have PIK3CA amplification also shared the PI3K activation signature, high protein expression of the PI3K pathway member STMN1, and an aggressive phenotype in test and validation datasets. However, mutations of PTEN or PIK3CA were not associated with the same expression profile or aggressive phenotype. STMN1 expression had independent prognostic value. The results affirm the utility of systematic characterization of the cancer genome in clinically annotated specimens and suggest the particular importance of the PI3K pathway in patients who have aggressive endometrial cancer.


Subject(s)
Endometrial Neoplasms/enzymology , Endometrial Neoplasms/genetics , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Genome, Human/genetics , Phosphatidylinositol 3-Kinases/metabolism , Biomarkers, Tumor/metabolism , Class I Phosphatidylinositol 3-Kinases , Cluster Analysis , Endometrial Neoplasms/diagnosis , Endometrial Neoplasms/pathology , Enzyme Activation , Female , Gene Dosage , Humans , Loss of Heterozygosity/genetics , Prognosis , Proto-Oncogene Proteins/metabolism , Proto-Oncogene Proteins p21(ras) , Stathmin/metabolism , Survival Analysis , ras Proteins/metabolism
9.
Br J Cancer ; 98(10): 1662-9, 2008 May 20.
Article in English | MEDLINE | ID: mdl-18475299

ABSTRACT

We studied the expression of polycomb group (PcG) protein BMI-1 in a large population-based patient series of endometrial carcinomas in relation to clinical and molecular phenotype. Also, 57 fresh frozen endometrial carcinomas were studied for the relationship between BMI-1 protein expression, BMI-1 mRNA level, and activation of an 11-gene signature reported to represent a BMI-1-driven pathway. BMI-1 protein expression was significantly weaker in tumours with vascular invasion (P<0.0001), deep myometrial infiltration (P=0.004), and loss of oestrogen receptor (ER) (P<0.0001) and progesterone receptors (PR) (P=0.03). Low BMI-1 protein expression was highly associated with low BMI-1 mRNA expression (P=0.002), and similarly low BMI-1 mRNA expression correlated significantly with vascular invasion, ER and PR loss, and histologic grade 3. In contrast, activation of the reported 11-gene signature, supposed to represent a BMI-1-driven pathway, correlated with low mRNA expression of BMI-1 (P<0.001), hormone receptor loss, presence of vascular invasion, and poor prognosis. We conclude that BMI-1 protein and mRNA expression are significantly correlated and that BMI-1 expression is inversely associated with activation of the 11-gene signature. Loss of BMI-1 seems to be associated with an aggressive phenotype in endometrial carcinomas.


Subject(s)
Biomarkers, Tumor/metabolism , Endometrial Neoplasms/metabolism , Endometrial Neoplasms/pathology , Nuclear Proteins/metabolism , Proto-Oncogene Proteins/metabolism , Receptors, Estrogen/metabolism , Receptors, Progesterone/metabolism , Repressor Proteins/metabolism , Vascular Neoplasms/metabolism , Vascular Neoplasms/pathology , Adult , Aged , Biomarkers, Tumor/genetics , Female , Gene Expression Regulation, Neoplastic , Humans , Immunohistochemistry , Middle Aged , Neoplasm Invasiveness , Neoplasm Staging , Nuclear Proteins/genetics , Phenotype , Polycomb Repressive Complex 1 , Polymerase Chain Reaction , Protein Array Analysis , Proto-Oncogene Proteins/genetics , RNA, Messenger/metabolism , Repressor Proteins/genetics , Survival Analysis
10.
Leukemia ; 22(2): 287-93, 2008 Feb.
Article in English | MEDLINE | ID: mdl-17943167

ABSTRACT

The balance between proangiogenic Angiopoietin-1 (Ang-1) and the antagonistic Ang-2 is important both for leukemogenesis and chemosensitivity in human acute myelogenous leukemia (AML). We examined the release of Ang-1 and Ang-2 by AML cells cultured alone and in cocultures with stromal cells. Detectable Ang-1 release from AML cells was observed for most patients (62/91), whereas Ang-2 release was detected only for a minority (23/91). Coculture of AML and stromal cells led to increased Ang-1 levels. Furthermore, the role of the angiopoietin system was investigated by characterizing whether the differences in angiopoietin expression in AML patients can be related to nucleophosmin (NPM1) mutations. We compared the gene expression profiles of AML cells derived from 19 patients with FLT3 mutations and normal cytogenetics with and without NPM1 mutations and observed increased expression of Ang-1 in patients with NPM1 mutations. Finally, we found significantly higher Ang-2 levels in serum of AML patients compared with healthy controls. Our results suggest that AML cells are a major source of Ang-1 in leukemic bone marrow, especially in patients with NPM1 mutations, but the local levels are also influenced by stromal cells. Local Ang-2 release from AML cells is less common, but high systemic levels of Ang-2 may affect bone marrow angioregulation.


Subject(s)
Angiopoietin-1/metabolism , Angiopoietin-2/metabolism , Bone Marrow/pathology , Leukemia, Myeloid, Acute/pathology , Nuclear Proteins/genetics , Stromal Cells/physiology , Adult , Aged , Aged, 80 and over , Angiopoietin-1/analysis , Angiopoietin-2/analysis , Case-Control Studies , Coculture Techniques , Female , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Humans , Leukemia, Myeloid, Acute/genetics , Male , Middle Aged , Mutation , Nucleophosmin
11.
J Neurooncol ; 85(2): 191-202, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17557137

ABSTRACT

This study describes the biological effects of hyperoxic treatment on BT4C rat glioma xenografts in vivo with special reference to tumor growth, angiogenesis, apoptosis, general morphology and gene expression parameters. One group of tumor bearing animals was exposed to normobaric hyperoxia (1 bar, pO(2) = 1.0) and another group was exposed to hyperbaric hyperoxia (2 bar, pO(2) = 2.0), whereas animals housed under normal atmosphere (1 bar, pO(2) = 0.2) served as controls. All treatments were performed at day 1, 4 and 7 for 90 min. Treatment effects were determined by assessment of tumor growth, vascular morphology (immunostaining for von Willebrand factor), apoptosis by TUNEL staining and cell proliferation by Ki67 staining. Moreover, gene expression profiles were obtained and verified by real time quantitative PCR. Hyperoxic treatment caused a approximately 60% reduction in tumor growth compared to the control group after 9 days (p < 0.01). Light microscopy showed that the tumors exposed to hyperoxia contained large "empty spaces" within the tumor mass. Moreover, hyperoxia induced a significant increase in the fraction of apoptotic cells ( approximately 21%), with no significant change in cell proliferation. After 2 bar treatment, the mean vascular density was reduced in the central parts of the tumors compared to the control and 1 bar group. The vessel diameters were significantly reduced (11-24%) in both parts of the tumor tissue. Evidence of induced cell death and reduced angiogenesis was reflected by gene expression analyses.Increased pO(2)-levels in experimental gliomas, using normobaric and moderate hyperbaric oxygen therapy, caused a significant reduction in tumor growth. This process is characterized by enhanced cell death, reduced vascular density and changes in gene expression corresponding to these effects.


Subject(s)
Brain Neoplasms/metabolism , Glioma/metabolism , Hyperbaric Oxygenation , Hyperoxia/metabolism , Neovascularization, Pathologic/prevention & control , Animals , Apoptosis/physiology , Brain Neoplasms/blood supply , Brain Neoplasms/pathology , Female , Gene Expression Profiling , Gene Expression Regulation, Neoplastic/physiology , Glioma/blood supply , Glioma/pathology , Hyperoxia/pathology , Male , Neoplasms, Experimental , Neovascularization, Pathologic/metabolism , Neovascularization, Pathologic/pathology , Oxygen/metabolism , Oxygen/therapeutic use , RNA, Neoplasm/analysis , Random Allocation , Rats , Rats, Nude
12.
Biochem Biophys Res Commun ; 281(5): 1161-9, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11243856

ABSTRACT

Human p32 was first isolated associated with the splicing factor ASF/SF-2. The p32 protein is translated as pre-protein from which a mitochondrial import signal is cleaved off to create the mature p32. The majority of p32 is consequently found in the mitochondria. In this study we investigated extramitochondrial p32. An increased nuclear localisation of endogenous p32 was demonstrated as a response to leptomycin B or actinomycin D treatment of cells. Mature p32 gene and deletion mutants were cloned into enhanced green fluorescence protein reporter plasmids. On transfection, EGFP-p32 protein was mainly localised to the cytoplasm and to a lesser extent to the nucleus of transfected COS cells. Upon treatment with actinomycin D or leptomycin B, the EGFP-p32 protein accumulated in the nucleus. Deletion analysis indicated which regions of EGFP-p32 are involved in nuclear export and nuclear import.


Subject(s)
Cell Nucleus/metabolism , Hyaluronan Receptors , Membrane Glycoproteins , Mitochondria/metabolism , Receptors, Complement/metabolism , Active Transport, Cell Nucleus/drug effects , Animals , COS Cells , Carrier Proteins , Cell Line , Dactinomycin/pharmacology , Fatty Acids, Unsaturated/pharmacology , Gene Products, rev/metabolism , Green Fluorescent Proteins , HeLa Cells , Heterogeneous-Nuclear Ribonucleoproteins , Humans , Indicators and Reagents/metabolism , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Methanol/chemistry , Mitochondrial Proteins , Receptors, Complement/genetics , Recombinant Fusion Proteins/metabolism , Ribonucleoproteins/metabolism , Sequence Deletion , Tissue Fixation , Transfection
13.
Biochem Biophys Res Commun ; 268(2): 509-13, 2000 Feb 16.
Article in English | MEDLINE | ID: mdl-10679235

ABSTRACT

Unspliced and partially spliced HIV RNAs are transported to the cytoplasm by the HIV encoded Rev protein. In the present study, a ribonucleoprotein complex which contains such incompletely spliced HIV RNA is identified. Soluble nuclear extracts were prepared from the lymphocyte cell line H9/IIIB that constitutively produces HIV-1 from a stably integrated provirus. Sucrose gradient centrifugation of the extracts and subsequent analysis of the gradient fractions by a ribonuclease protection assay revealed a population of incompletely spliced HIV-1 RNAs which accumulates in the 100S region of the gradient. Similar analysis of cellular mRNAs including beta-actin and glyceraldehyde 3-phosphate dehydrogenase (GAPDH) revealed that these RNA molecules also exhibit characteristic sedimentation profiles in sucrose gradients. This study suggests that nuclear ribonucleoprotein particles containing incompletely spliced HIV-1 RNAs are amenable for biochemical characterisation.


Subject(s)
HIV-1/metabolism , RNA, Viral/metabolism , Ribonucleoproteins, Small Nuclear/chemistry , HIV-1/genetics , Humans , Lymphocytes/virology , RNA Splicing/genetics , RNA, Viral/genetics , Tumor Cells, Cultured
14.
Tidsskr Nor Laegeforen ; 119(6): 802-9, 1999 Feb 28.
Article in Norwegian | MEDLINE | ID: mdl-10101943

ABSTRACT

The introduction and increasing usage of nucleic acid based methods in clinical microbiology over the last years have contributed to better and earlier diagnosis of infectious diseases as well as more accurate monitoring of treatment. Various nucleic acid amplification methods such as the polymerase chain reaction and the ligase chain reaction are widely used in Norwegian clinical microbiological laboratories to detect fastidious or non-cultured infectious agents. The amplification methods combine an extremely high sensitivity with acceptable specificity. About 200,000 nucleic acid based examinations are now performed in clinical microbiological laboratories in Norway each year.


Subject(s)
Bacterial Infections/diagnosis , Genetic Techniques , Virus Diseases/diagnosis , Bacterial Typing Techniques , Blood Donors , Gene Amplification , Humans , Mass Screening , Neonatal Screening , Norway , Nucleic Acid Hybridization , Polymerase Chain Reaction
15.
Virology ; 244(2): 473-82, 1998 May 10.
Article in English | MEDLINE | ID: mdl-9601515

ABSTRACT

The HIV-1 protein Rev regulates the cytoplasmic levels of incompletely spliced HIV-1 mRNAs. The plasmid pSVc21, which contains a HIV-1 provirus, was introduced into COS cells by transient transfection. Simultaneous detection of HIV-1 RNAs and Rev proteins produced in transfected cells was then performed in order to determine the relative distribution of these two components. HIV-1 RNAs and the Rev protein localized to the same areas of the nucleoplasm, implying that these locations represent sites where Rev interacts with its target RNAs. Using a monoclonal antibody targeted to the splicing factor SC-35 it was demonstrated that the sites where HIV-1 mRNAs and Rev were detected often contained weak anti-SC-35 staining, whereas little RNA and Rev were found in strongly labeled SC-35-containing speckles. The same distribution of HIV-1 RNAs relative to SC-35 was also seen in transfected HeLa cells and in primary human lymphocytes infected with HIV-1 primary isolates. In addition, transiently expressed intron-containing beta-globin RNAs were shown to distribute to weak anti-SC-35 staining in a manner similar to that of HIV-1 RNAs. The findings suggest that Rev and HIV-1 RNAs interact at putative sites of mRNA transcription and splicing.


Subject(s)
Gene Products, rev/metabolism , HIV-1/metabolism , Nuclear Proteins/metabolism , RNA, Viral/metabolism , Ribonucleoproteins , Animals , Antibodies, Monoclonal , Binding Sites , COS Cells , Cell Nucleus/metabolism , Cell Nucleus/virology , Gene Products, rev/immunology , Globins/genetics , HIV-1/genetics , Humans , In Situ Hybridization, Fluorescence , Introns , Nuclear Proteins/immunology , RNA Splicing , RNA, Messenger/genetics , RNA, Messenger/metabolism , RNA, Viral/genetics , Serine-Arginine Splicing Factors , Subcellular Fractions , Transfection , rev Gene Products, Human Immunodeficiency Virus
16.
Arch Virol ; 143(2): 279-94, 1998.
Article in English | MEDLINE | ID: mdl-9541613

ABSTRACT

HeLa cells and HeLa cells expressing the HIV-1 regulatory protein Rev were immunostained for Rev and pre-mRNA processing factors and examined histographically by confocal laser scanning microscopy. Following short pulse-labelling with bromouridine tri-phosphate nascent RNA gave a granular nucleoplasmic staining increasing somewhat towards the periphery as did also the heterogeneous ribonucleoproteins (hnRNPs) A1 and particularly C1/C2, a distribution pattern which has not been described. The sm-antigen of the small ribonucleoprotein particle (snRNP) proteins U1, U2, U4/U6 and U5 stained the nucleoplasm diffusely in addition to speckles which co-localised with speckles of the non-snRNP splicing factor SC-35. Brominated RNA and the hnRNPs A1 and C1/C2 were to varying degrees excluded from the speckles. Rev concentrated in the nucleolus and often as a perinucleolar ring/zone. Rev also stained the nucleoplasm and cytoplasm without co-localising with the above-mentioned proteins or brominated RNA and was not enriched or excluded in SC-35 speckles. The nucleolar proteins B23 and C23, like Rev, gave primarily a perinucleolar ring and stained the nucleoplasm but did not otherwise co-localise with Rev or with nuclear proteins. Histographic recording of immunofluorescence images proved to be a valuable tool in the study of localisation of HIV-1 Rev and cellular components and of possible co-localisations. A parallel comparison of the subcellular patterns of pre-mRNA processing factors versus major nucleolar antigens is new and suggests that the factors are not strictly separated in the nucleoplasm.


Subject(s)
Gene Products, rev/analysis , HIV-1/chemistry , Nuclear Proteins/analysis , Animals , Bromodeoxyuridine/metabolism , Fluorescent Antibody Technique , HeLa Cells , Humans , Immunohistochemistry , Mice , RNA, Messenger/metabolism , RNA, Viral/analysis , Transfection , rev Gene Products, Human Immunodeficiency Virus
17.
Virology ; 235(1): 73-81, 1997 Aug 18.
Article in English | MEDLINE | ID: mdl-9300038

ABSTRACT

Oligomerization of Rev molecules has been shown to be required for Rev function. In addition to a Western blot assay monitoring dimer formation, a new in vivo assay analyzing formation of Rev heteromers in the cytoplasm and during nuclear import is presented here. The oligomerization assay is based upon the ability of Rev mutants with an intact nuclear localization signal (NLS) to interact specifically with mutants with a defective NLS and translocate such mutants to the nuclear compartments. Several of the mutants previously reported to be oligomerization defective were found to mediate nuclear and nucleolar localization of the NLS mutant. The Rev mutant previously named M4 was the only mutant tested that did not translocate the mutant with a defective NLS to the nucleus. Furthermore, the predominantly cytoplasmic localization of the M4 mutant suggests that oligomerization is important for effective nuclear import of Rev.


Subject(s)
Cell Nucleus/metabolism , Gene Products, rev/chemistry , Gene Products, rev/metabolism , HIV-1/metabolism , Animals , Blotting, Western , COS Cells , Cytoplasm/metabolism , Gene Products, rev/biosynthesis , HIV-1/genetics , Macromolecular Substances , Mutagenesis, Site-Directed , Point Mutation , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Sequence Deletion , Transfection , rev Gene Products, Human Immunodeficiency Virus
18.
Biotechniques ; 22(2): 308-12, 1997 Feb.
Article in English | MEDLINE | ID: mdl-9043703

ABSTRACT

Bromouridine-triphosphate (BrUTP), when introduced into eukaryotic cells in culture, substitutes for UTP during transcription, thereby labeling pre-mRNA for detection by immunochemical methods. In earlier studies, BrUTP was internalized by means of microinjection or by exposing isolated nuclei or permeable cells to BrUTP. We describe here a simple method for the extensive uptake of BrUTP into monolayers of growing cells using a cationic liposome transfectant (DOTAP). Within minutes, DOTAP mediates uptake of BrUTP both at 37 degrees and 4 degrees C. This is followed by incorporation into RNA in the nucleus upon further incubation under culture conditions. In this way, large numbers of actively growing cells may be subjected to biochemical experiments.


Subject(s)
Fatty Acids, Monounsaturated , Liposomes , Quaternary Ammonium Compounds , RNA, Messenger/analysis , Transfection , Uridine Triphosphate/analogs & derivatives , Fluorescent Antibody Technique , Fluorescent Dyes , HeLa Cells , Humans , Immunohistochemistry , Microinjections , RNA Precursors , Uridine Triphosphate/metabolism
19.
FEMS Immunol Med Microbiol ; 13(1): 43-50, 1996 Jan.
Article in English | MEDLINE | ID: mdl-8821397

ABSTRACT

Ten patients with chronic liver disease, seven healthy seropositive individuals with a remote history of rubella, and three patients with acute rubella were examined for serum levels of IgG subclasses and subclass antibodies against rubella virus structural proteins. One patient with AICAH had no detectable total or rubella specific IgG3 or IgG4. The liver disease patients were hypergammaglobulinemic and had greatly raised IgG1 levels. Patients with acute rubella lacked antibodies to the rubella virus E2 protein and showed no IgG4 antibody response. The liver disease patients showed a somewhat weaker IgG4 antibody response against the core (C) protein than healthy controls. However, differences are suggested within the subclasses in antibody reactivity against the individual rubella virus antigens. It is concluded that test systems that discriminate reactivities against individual antigens have to be used for characterization of viral antibody subclass profiles.


Subject(s)
Antibodies, Viral/blood , Autoimmune Diseases/virology , Immunoglobulin G/blood , Liver Diseases/immunology , Liver Diseases/virology , Rubella virus/immunology , Rubella/immunology , Acute Disease , Adolescent , Adult , Antibodies, Viral/classification , Autoimmune Diseases/immunology , Female , Hepatitis, Chronic/immunology , Hepatitis, Chronic/virology , Humans , IgG Deficiency/immunology , Immunoblotting , Immunoglobulin G/classification , Liver Cirrhosis/immunology , Liver Cirrhosis/virology , Viral Structural Proteins/immunology
20.
J Virol ; 69(6): 3315-23, 1995 Jun.
Article in English | MEDLINE | ID: mdl-7745679

ABSTRACT

The human immunodeficiency virus type 1 nucleocytoplasmic shuttle protein Rev moves repeatedly between the cytoplasm, a perinuclear zone, the nucleoli, and nucleoplasmic speckles. In this study, we demonstrated by both indirect immunofluorescence and Western immunoblot analysis that nuclear exit of Rev transdominant negative mutants was defective compared with that of wild-type Rev. The basic and activation domains of Rev signal import and export, respectively, of Rev across the nuclear membrane. In cotransfection experiments, mutants containing mutations of Rev inhibited the nuclear egress of wild-type Rev, thus revealing a novel transdominant negative phenotype.


Subject(s)
Cell Nucleus/metabolism , Gene Products, rev/metabolism , HIV-1/metabolism , Animals , Biological Transport , Blotting, Western , Cell Line , Dactinomycin/pharmacology , Fluorescent Antibody Technique , Gene Products, rev/drug effects , Gene Products, rev/genetics , Genes, Dominant , HIV-1/genetics , Mutation , RNA Splicing , RNA, Messenger/genetics , RNA, Viral/genetics , rev Gene Products, Human Immunodeficiency Virus
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