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1.
Clin Microbiol Infect ; 19(6): 542-9, 2013 Jun.
Article in English | MEDLINE | ID: mdl-22757622

ABSTRACT

The aim of this study was to determine the rate of carriage of ESBL-producing Enterobacteriaceae (ESBL-E) in the community in the Netherlands and to gain understanding of the epidemiology of these resistant strains. Faecal samples from 720 consecutive patients presenting to their general practitioner, obtained in May 2010, and between December 2010 and January 2011, were analysed for presence of ESBL-E. Species identification and antibiotic susceptibility testing were performed according to the Dutch national guidelines. PCR, sequencing and microarray were used to characterize the genes encoding for ESBL. Strain typing was performed with amplified fragment length polymorphism (AFLP) and multilocus sequence typing (MLST). Seventy-three of 720 (10.1%) samples yielded ESBL-producing organisms, predominantly E. coli. No carbapenemases were detected. The most frequent ESBL was CTX-M-15 (34/73, 47%). Co-resistance to gentamicin, ciprofloxacin and cotrimoxazole was found in (9/73) 12% of the ESBL-E strains. AFLP did not show any clusters, and MLST revealed that CTX-M-15-producing E. coli belonged to various clonal complexes. Clonal complex ST10 was predominant. This study showed a high prevalence of ESBL-producing Enterobacteriaceae in Dutch primary care patients with presumed gastrointestinal discomfort. Hence, also in the Netherlands, a country with a low rate of consumption of antibiotics in humans, resistance due to the expansion of CTX-M ESBLs, in particular CTX-M-15, is emerging. The majority of ESBL-producing strains do not appear to be related to the international clonal complex ST131.


Subject(s)
Enterobacteriaceae Infections/epidemiology , Enterobacteriaceae/metabolism , Gastrointestinal Diseases/epidemiology , beta-Lactamases/biosynthesis , Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Community-Acquired Infections , Drug Resistance, Bacterial , Enterobacteriaceae/classification , Enterobacteriaceae/drug effects , Enterobacteriaceae/genetics , Female , Gastrointestinal Diseases/microbiology , Humans , Male , Microbial Sensitivity Tests , Middle Aged , Multilocus Sequence Typing , Netherlands/epidemiology , Phylogeny , Plasmids/genetics , Prevalence , Young Adult , beta-Lactamases/genetics
3.
J Hosp Infect ; 68(4): 341-7, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18358564

ABSTRACT

Over a two-week period in November 2006, vancomycin-resistant Bacillus cereus was isolated from respiratory samples from six ventilated paediatric intensive care unit (PICU) patients. To investigate the possibility of a common source and extent of the dissemination, all procedures related to mechanical ventilation were monitored and surveillance cultures performed. B. cereus was isolated from reusable air-flow sensors, before and after on-site disinfection with 70% alcohol. The organism was also isolated from respiratory samples from three other ventilated patients and from two ventilation grids in the ceiling of PICU, as well as from the alcohol solution itself. Using amplified fragment length polymorphism (AFLP) typing, B. cereus strains from the six PICU patients together with isolates recovered from the air-flow sensors and the alcohol solution were shown to be closely related. Isolates from the ventilation grids demonstrated different AFLP patterns to the outbreak strain. Intervening measures, including disinfection by autoclaving all reusable air-flow-guiding parts and the use of disposable non-autoclavable parts, resulted in rapid termination of the outbreak. B. cereus infections can cause significant morbidity, particularly in intensive care patients. Disinfection of all air-flow-guiding reusable parts for mechanical ventilation should be addressed with great care and should include effective autoclaving in order to eradicate spores.


Subject(s)
Bacillus cereus/isolation & purification , Cross Infection/microbiology , Cross Infection/transmission , Disinfection/methods , Equipment Contamination , Ventilators, Mechanical/microbiology , Amplified Fragment Length Polymorphism Analysis , Bacillus cereus/genetics , Child , Child, Preschool , Cross Infection/prevention & control , Disease Outbreaks , Equipment Contamination/prevention & control , Genotype , Gram-Positive Bacterial Infections/microbiology , Gram-Positive Bacterial Infections/transmission , Humans , Intensive Care Units , Interviews as Topic , Netherlands , Pediatrics , Vancomycin Resistance , Ventilation
4.
J Clin Microbiol ; 45(12): 4048-50, 2007 Dec.
Article in English | MEDLINE | ID: mdl-17913932

ABSTRACT

Randomly amplified polymorphic DNA (RAPD), pulsed-field gelelectrophoresis (PFGE), and amplified fragment length polymorphism (AFLP) analyses were used to investigate a possible outbreak of Nocardia farcinica. RAPD and PFGE analyses yielded irreproducible and unsatisfactory results, respectively. AFLP analysis seem to be a promising and welcome addition for molecular analysis of Nocardia isolates.


Subject(s)
DNA Fingerprinting , DNA, Bacterial/genetics , Nocardia Infections/epidemiology , Nocardia Infections/microbiology , Nocardia/classification , Nocardia/genetics , Aged , Cluster Analysis , Electrophoresis, Gel, Pulsed-Field , Female , Humans , Male , Middle Aged , Molecular Epidemiology/methods , Nocardia/isolation & purification , Polymorphism, Restriction Fragment Length , Random Amplified Polymorphic DNA Technique
5.
Bone Marrow Transplant ; 40(2): 137-43, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17530007

ABSTRACT

Reports on infectious complications following reduced intensity conditioning (RIC) before allogeneic stem cell transplantation (allo-SCT) are equivocal. This prospective follow-up study compared the impact of cytomegalovirus (CMV) infections following RIC with fludarabine, ATG and busulphan or conventional myeloablative conditioning (MAC). Forty-eight RIC and 59 MAC patients were enrolled. The occurrence and severity of CMV infections within 100 days following allo-SCT were assessed, using plasma CMV DNA load kinetics. CMV DNAemia was observed in 21 RIC (60%) and in 19 MAC (44%) patients at risk for CMV. The mean CMV DNAemia free survival time was comparable following RIC and MAC: 70 days (95% (confidence interval) CI: 59-80 days) and 77 days (95% CI: 68-86 days), respectively (P=0.24). Parameters indicative for the level of CMV reactivation, including the area under the curve of CMV DNA load over time as well as the onset, the peak values and duration of CMV infection episodes, the numbers and duration of CMV treatment episodes and recurrent infections, were not different in both groups. During follow-up, none of the patients developed CMV disease. RIC with fludarabine, ATG and busulphan demonstrated safety comparable to conventional MAC with regard to frequency and severity of CMV infections within 100 days following T cell-depleted allo-SCT.


Subject(s)
Cytomegalovirus Infections/etiology , Stem Cell Transplantation/adverse effects , Transplantation Conditioning/adverse effects , Adult , Aged , Cytomegalovirus Infections/virology , DNA, Viral/blood , Female , Follow-Up Studies , Hematologic Neoplasms/therapy , Humans , Lymphocyte Depletion/adverse effects , Male , Middle Aged , Neoplasms/therapy , Prospective Studies , Recurrence , T-Lymphocytes/immunology , Transplantation Conditioning/methods , Transplantation, Homologous
6.
Bone Marrow Transplant ; 38(1): 41-6, 2006 Jul.
Article in English | MEDLINE | ID: mdl-16715108

ABSTRACT

Detection of Varicella-Zoster virus (VZV) DNA in plasma can facilitate the early recognition of complicated VZV-infection in immunocompromised hosts. The correlation of VZV-DNA in plasma with clinical presentations of VZV-infection and subsequent aciclovir treatment in allogeneic stem cell transplant (allo-SCT) recipients was studied. In 81 consecutive VZV-IgG positive allo-SCT recipients, VZV-DNA was measured at regular time points (1, 2 and 4 months) following allo-SCT and patient records were screened for VZV-related symptoms and aciclovir treatment. Subsequently, possible VZV-cases were studied in detail for the course of VZV-DNA and treatment effects. During the initial screening, VZV-DNA was detectable in seven patients. The survey of VZV-related symptoms revealed five additional possible VZV-cases. In cases where suitable plasma samples were available (10 out of 12), VZV-DNA was present almost simultaneously with the first clinical manifestations. No evidence of a preceding phase detectable by VZV-DNA only could be observed. Treatment with aciclovir was associated with a prompt reduction of VZV-DNA load. Detection of VZV-DNA in plasma in allo-SCT recipients accurately reflected the clinical presentation of VZV-infection and treatment with aciclovir. VZV-DNA detection in plasma of allo-SCT recipients appears clinically relevant as this may support early recognition and therapeutic management of VZV-infections following allo-SCT.


Subject(s)
DNA, Viral/blood , Herpes Zoster/diagnosis , Herpesvirus 3, Human/genetics , Stem Cell Transplantation/adverse effects , Acyclovir/therapeutic use , Adult , Aged , Antibodies, Viral/blood , Antiviral Agents/therapeutic use , Cohort Studies , Female , Herpes Zoster/blood , Herpes Zoster/drug therapy , Herpesvirus 3, Human/drug effects , Humans , Male , Middle Aged , Polymerase Chain Reaction/methods , Predictive Value of Tests , Sensitivity and Specificity , Time Factors , Transplantation, Homologous , Treatment Outcome , Viremia/blood , Viremia/diagnosis
7.
Bone Marrow Transplant ; 37(7): 693-8, 2006 Apr.
Article in English | MEDLINE | ID: mdl-16501590

ABSTRACT

The efficacy and safety of oral valganciclovir was compared to ganciclovir i.v. in pre-emptive treatment of cytomegalovirus (CMV) in T-cell-depleted allogeneic stem cell transplant (allo-SCT) recipients. A therapeutic guideline was developed to allow the safe application of valganciclovir in allo-SCT recipients requiring CMV therapy. In total, 107 consecutive transplant recipients were evaluated. Cytomegalovirus DNA load in plasma was monitored longitudinally; details on antiviral therapy and treatment responses were analyzed retrospectively. Fifty-seven CMV treatment episodes were recorded in 34 patients: 20 with valganciclovir (900 mg twice-daily) and 37 with ganciclovir (5 mg/kg twice-daily). Median CMV DNA load reduction was 0.079 and 0.069 log10 copies/ml/day in the ganciclovir and valganciclovir group, respectively. Good response on CMV DNA load (reduction below 3.0 log10 copies/ml) was observed in 75.7% of ganciclovir and 80.0% of valganciclovir treatment episodes. Severe adverse effects were not observed and CMV-related disease did not occur. However, the percentage of patients receiving erythrocyte transfusion was higher in the group of patients receiving ganciclovir as compared to valganciclovir (41 versus 20%, P=0.116). In conclusion, pre-emptive treatment with valganciclovir and ganciclovir, led to similar reduction of CMV DNA load. Oral valganciclovir is an attractive and safe alternative for pre-emptive CMV treatment in T-cell-depleted allo-SCT recipients.


Subject(s)
Cytomegalovirus Infections/prevention & control , DNA, Viral/blood , Ganciclovir/analogs & derivatives , Ganciclovir/administration & dosage , Stem Cell Transplantation , Viral Load , Administration, Oral , Adult , Antiviral Agents/administration & dosage , Drug-Related Side Effects and Adverse Reactions , Female , Humans , Injections, Intravenous , Longitudinal Studies , Male , Middle Aged , Prospective Studies , Risk Factors , Stem Cell Transplantation/adverse effects , Stem Cell Transplantation/methods , Transplantation Conditioning , Transplantation, Homologous , Treatment Outcome , Valganciclovir
8.
J Clin Pathol ; 59(5): 537-41, 2006 May.
Article in English | MEDLINE | ID: mdl-16489178

ABSTRACT

OBJECTIVE: To evaluate the role of quantitative measurement of Epstein-Barr virus (EBV) DNA in the clinical management of nasopharyngeal carcinoma (NPC) in a low tumour risk area (western Europe). METHODS: 22 consecutive Dutch NPC patients (11 europid) were studied. EBV DNA load in pretreatment and post-treatment plasma samples was determined. Three patients were also sampled at frequent intervals during treatment. RNA in situ hybridisation for the detection of EBV encoded RNAs (EBERs) was carried out on tumour biopsies of all cases. RESULTS: All patients with EBER positive NPC (20/22) showed a positive EBV DNA load in plasma at the time of diagnosis (median EBV DNA level, 4.1 log(10) copies/ml). Patients with EBER negative NPC had no detectable EBV DNA in plasma. After treatment, complete remission was achieved in all cases and concurrently EBV DNA in plasma became undetectable in all patients. In the three longitudinally evaluated cases, EBV DNA load gradually declined towards undetectable levels within three weeks after start of treatment. Two patients developed a distant metastasis with concomitant increases in EBV viral load. In addition, one EBER positive patient developed an EBER negative metastasis in the neck during follow up and in this case EBV DNA load remained undetectable at the time of recurrence. CONCLUSIONS: Plasma EBV DNA load measurement appears to be useful in a low tumour risk area. However, development of local recurrences may not always coincide with raised levels of EBV DNA.


Subject(s)
Biomarkers, Tumor/blood , Carcinoma/virology , DNA, Viral/blood , Herpesvirus 4, Human/genetics , Nasopharyngeal Neoplasms/virology , Adult , Aged , Biomarkers, Tumor/analysis , Carcinoma/therapy , DNA, Viral/analysis , Female , Follow-Up Studies , Humans , Male , Middle Aged , Nasopharyngeal Neoplasms/therapy , Neoplasm Recurrence, Local/virology , Polymerase Chain Reaction/methods , Risk , Sensitivity and Specificity , Viral Load
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