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1.
Proc Natl Acad Sci U S A ; 112(49): 15178-83, 2015 Dec 08.
Article in English | MEDLINE | ID: mdl-26598665

ABSTRACT

Plasmodium falciparum malaria originated in Africa and became global as humans migrated to other continents. During this journey, parasites encountered new mosquito species, some of them evolutionarily distant from African vectors. We have previously shown that the Pfs47 protein allows the parasite to evade the mosquito immune system of Anopheles gambiae mosquitoes. Here, we investigated the role of Pfs47-mediated immune evasion in the adaptation of P. falciparum to evolutionarily distant mosquito species. We found that P. falciparum isolates from Africa, Asia, or the Americas have low compatibility to malaria vectors from a different continent, an effect that is mediated by the mosquito immune system. We identified 42 different haplotypes of Pfs47 that have a strong geographic population structure and much lower haplotype diversity outside Africa. Replacement of the Pfs47 haplotypes in a P. falciparum isolate is sufficient to make it compatible to a different mosquito species. Those parasites that express a Pfs47 haplotype compatible with a given vector evade antiplasmodial immunity and survive. We propose that Pfs47-mediated immune evasion has been critical for the globalization of P. falciparum malaria as parasites adapted to new vector species. Our findings predict that this ongoing selective force by the mosquito immune system could influence the dispersal of Plasmodium genetic traits and point to Pfs47 as a potential target to block malaria transmission. A new model, the "lock-and-key theory" of P. falciparum globalization, is proposed, and its implications are discussed.


Subject(s)
Anopheles/immunology , Immune Evasion , Malaria, Falciparum/transmission , Plasmodium falciparum/physiology , Animals , Anopheles/parasitology , Insect Vectors , Molecular Sequence Data
2.
PLoS One ; 9(9): e106305, 2014.
Article in English | MEDLINE | ID: mdl-25180860

ABSTRACT

The plant-infecting Secoviridae family of viruses forms part of the Picornavirales order, an important group of non-enveloped viruses that infect vertebrates, arthropods, plants and algae. The impact of the secovirids on cultivated crops is significant, infecting a wide range of plants from grapevine to rice. The overwhelming majority are transmitted by ecdysozoan vectors such as nematodes, beetles and aphids. In this study, we have applied a variety of computational methods to examine the evolutionary traits of these viruses. Strong purifying selection pressures were calculated for the coat protein (CP) sequences of nine species, although for two species evidence of both codon specific and episodic diversifying selection were found. By using Bayesian phylogenetic reconstruction methods CP nucleotide substitution rates for four species were estimated to range from between 9.29×10(-3) to 2.74×10(-3) (subs/site/year), values which are comparable with the short-term estimates of other related plant- and animal-infecting virus species. From these data, we were able to construct a time-measured phylogeny of the subfamily Comovirinae that estimated divergence of ninety-four extant sequences occurred less than 1,000 years ago with present virus species diversifying between 50 and 250 years ago; a period coinciding with the intensification of agricultural practices in industrial societies. Although recombination (modularity) was limited to closely related taxa, significant and often unique similarities in the protein domains between secovirid and animal infecting picorna-like viruses, especially for the protease and coat protein, suggested a shared ancestry. We discuss our results in a wider context and find tentative evidence to indicate that some members of the Secoviridae might have their origins in insects, possibly colonizing plants in a number of founding events that have led to speciation. Such a scenario; virus infection between species of different taxonomic kingdoms, has significant implications for virus emergence.


Subject(s)
Biological Evolution , Picornaviridae/genetics , Plant Viruses/genetics , Animals , Capsid Proteins/chemistry , Capsid Proteins/metabolism , Genetic Variation , Genome, Viral , Host-Pathogen Interactions , Likelihood Functions , Models, Biological , Nucleotides/genetics , Phylogeny , Picornaviridae/isolation & purification , Plant Viruses/isolation & purification , Plants/virology , Protein Structure, Tertiary , Selection, Genetic , Sequence Homology, Amino Acid , Species Specificity
3.
Virus Res ; 167(1): 34-42, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22487310

ABSTRACT

Viruses are most frequently discovered because they cause disease. To expand knowledge of plant-associated viruses beyond these narrow constraints, non-cultivated plants of the Tallgrass Prairie of the United States were systematically surveyed for evidence of viruses. This report discusses putative viruses of the family Secoviridae identified by the survey. Sequence analysis suggests the presence of at least six viruses in the study site, including Bean pod mottle virus, Maize chlorotic dwarf virus, three previously undescribed viruses within the subfamily Comovirinae and one unclassifiable virus.


Subject(s)
Plant Diseases/virology , Plant Viruses/classification , Plant Viruses/isolation & purification , Poaceae/virology , Conservation of Natural Resources , Molecular Sequence Data , Oklahoma , Phylogeny , Plant Viruses/genetics
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