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Hum Genet ; 114(5): 503-9, 2004 Apr.
Article in English | MEDLINE | ID: mdl-15004750

ABSTRACT

Sarcoidosis is known to be a systemic granulomatous disorder characterized by a cell-mediated Th1-type inflammatory response. To identify a key genetic factor in the pathogenesis of sarcoidosis, we investigated single nucleotide polymorphisms within 10 candidate genes involved in type 1 immune process ( IFNA17, IFNB, IFNG, IFNGR1, IFNGR2, IL12B, IL12RB1, IL12RB2, ETA-1, and NRAMP1) in an association-based study of 102 Japanese patients with sarcoidosis, 114 with tuberculosis, and 110 control subjects. After correction for multiple testing, an IFNA17 polymorphism (551T-->G) was found to be associated with susceptibility to sarcoidosis (odds ratio 3.27 [95% CI: 1.44-7.46], P=0.004, P(c)=0.04), but not to tuberculosis. We observed no significant associations with the other polymorphisms of the Th1-related genes. We further typed another IFNA polymorphism ( IFNA10 60T-->A) and confirmed two major haplotypes of the IFNA gene, viz., allele 1: IFNA10 [60T]- IFNA17 [551T] and allele 2: IFNA10 [60A]- IFNA17 [551G], in the Japanese population. In healthy subjects, IFNA allele 2, which is over-represented in patients with sarcoidosis, was significantly associated with increased IFN-alpha and IL-12p70 production induced by Sendai virus in vitro. This study suggests that possession of the IFNA allele with higher levels of IFN-alpha significantly increases the risk of sarcoidosis.


Subject(s)
Interferons/genetics , Polymorphism, Single Nucleotide/genetics , Risk Factors , Sarcoidosis/genetics , Adolescent , Adult , Aged , Biological Assay , Case-Control Studies , Child , DNA Primers , Enzyme-Linked Immunosorbent Assay , Female , Gene Frequency , Haplotypes/genetics , Humans , Interferon-alpha/blood , Interferon-alpha/metabolism , Interleukin-12/blood , Interleukin-12/metabolism , Japan , Male , Middle Aged , Sendai virus/metabolism
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