Long-term changes in the structure of benthic communities: Revisiting a sampling transect in Crete after 24 years.

A bathymetric transect in the north coast of Crete first studied in 1989, was revisited 24 years later. Identical sampling design, season, techniques and protocols were followed in both studies in order to minimize bias in the long-term comparisons. This comprehensive macrofaunal dataset (4 stations, 2 sampling seasons, 7 replicates in each study) revealed changes in benthic diversity and community composition between the sampling periods. The recorded changes were higher at the stations located close to the coastal zone. In addition, while benthic communities showed lower total abundance during the recent sampling period, species abundances were more evenly distributed indicating that some species dominated the historical communities. In spite of these changes, the ecological status remained above the threshold values for good ecological status. The results indicated that changes in the benthic community seem to have been driven by local anthropogenic factors and natural variability rather than by large-scale factors such as nutrients influxes in the entire Mediterranean Basin.

Modified niche optima and breadths explain the historical contingency of bacterial community responses to eutrophication in coastal sediments.

Previous studies have shown that the response of bacterial communities to disturbances depends on their environmental history. Historically fluctuating habitats host communities that respond better to disturbance than communities of historically stable habitats. However, the exact ecological mechanism that drives this dependency remains unknown. Here, we experimentally demonstrate that modifications of niche optima and niche breadths of the community members are driving this dependency of bacterial responses to past environmental conditions. First, we develop a novel, simple method to calculate the niche optima and breadths of bacterial taxa regarding single environmental gradients. Then, we test this method on sediment bacterial communities of three habitats, one historically stable and less loaded and two historically more variable and more loaded habitats in terms of historical chlorophyll-α water concentration, that we subject to hypoxia via organic matter addition ex situ. We find that communities containing bacterial taxa differently adapted to hypoxia show different structural and functional responses, depending on the sediment's environmental history. Specifically, in the historically less fluctuating and loaded sediments where we find more taxa poorly adapted to hypoxic conditions, communities change a lot over time and organic matter is not degraded efficiently. The opposite is true for the historically more fluctuating and loaded sediments where we find more taxa well adapted to hypoxia. Based on the community responses observed here, we also propose an alternative calculation of community resistance that takes into account how rapidly the communities respond to disturbances and not just the initial and final states of the community.

Metals in tissues of seabass and seabream reared in sites with oxic and anoxic substrata and risk assessment for consumers.

Twenty-eight metals and elements were measured in the muscle, liver, gills, bone and intestine of farmed seabass and gilthead seabream from four Mediterranean fish farms. The influence of fish species and the effect of environmental conditions on the metal accumulation in fish tissues was investigated. Most concentrations were lower in muscle and higher in liver and bone than in other body tissues. Seabass accumulates more elements in its tissues than seabream. Fish reared in coarse, oxic sites accumulate more elements with higher concentrations in muscle, bone and intestine and with lower concentrations in liver and gills than fish reared in silty, anoxic sites. This may be attributed to feed type and sediment properties. According to the metal pollution index, hazard quotient, selenium health benefit values, carcinogenic risk of arsenic, maximum safe consumption and the permitted limits, the consumption of both farmed species should be considered as safe for human health.

Effects of organic pollution on biological communities of marine biofilm on hard substrata.

We examined the effect of organic enrichment on diatom and bacterial assemblages of marine epilithic biofilms on two locations in the Mediterranean, one situated in Spain and the other in Greece. Total organic carbon, total organic nitrogen, stable isotopes (δ(13)C and δ(15)N) and chlorophyll a indicated significant incorporation of organic wastes, increased primary production and trophic niche modifications on the biofilms close to the organic enrichment source. In Spain, where the organic load was higher than in Greece, diatom and, to some extent, bacterial assemblages varied following the organic enrichment gradient. The taxonomic richness of diatom and bacterial communities was not influenced by organic enrichment. Classical community parameters showed consistent patterns to organic pollution in both locations, whereas community assemblages were only influenced when organic pollution was greatest. The successional patterns of these communities were similar to other epilithic communities. The modification of community assemblages induced by organic pollution may affect ecological functions.

Metals in benthic macrofauna and biogeochemical factors affecting their trophic transfer to wild fish around fish farm cages.

Benthic macroinvertebrates and wild fish aggregating in the vicinity of four Mediterranean fish farms were sampled. Concentrations of metals and other elements were measured in macrofaunal taxa and in fish tissues (muscle, liver, gills, bone, gonad, stomach, intestine, and stomach content). Biological and geochemical characteristics play an important role in metal accumulation in benthic invertebrates, and consequently in metal transfer to higher trophic levels. Macroinvertebrates accumulated lower concentrations of most metals and elements than their respective sediment, except As, P, Na, Zn and Cd. Elemental concentrations of benthic organisms increased with increasing sediment metal content, except Cd, and with % silt, refractory organic matter and chlorophyll-a of sediment due to the influence of sediment geochemistry on metal bioavailability. Tolerant species were found to accumulate higher concentrations of most metals and elements, except for Cd, than equilibrium species. The ecological and morphological characteristics of the benthic invertebrates can affect the bioaccumulation of metals and elements in macrobenthos. Hg and P were found to increase their concentrations from zoobenthos to wild fish aggregating around fish cages feeding on macrofauna.

Heavy metals, trace elements and sediment geochemistry at four Mediterranean fish farms.

Trace element concentrations in sediment were investigated at four fish farms in the Eastern Mediterranean Sea. Fish farms effects were negligible beyond 25-50 m from the edge of the cages. Based on elemental distribution, sediments from the farms were separated into coarse oxidized and silty reduced ones. Fish feed is richer in P, Zn and Cd than reference and impacted stations. Comparison among impacted stations and the respective reference stations shows that, in anoxic sediments, all elements had higher concentrations at the impacted stations than at reference stations while in oxic sediments, many elemental concentrations were lower at impacted stations than at reference stations. The behavior of elements and therefore their distribution is affected by changes in sediment grain size, organic content and redox regime. Elements in sediments around fish farms can be clustered into five groups according to these environmental variables. In silty and anoxic sediments, element concentrations were higher than in coarse and oxic ones. Several approaches were used to assess potential sediment toxicity (enrichment factors, geoaccumulation indices, contamination factors) as well as to assess the potential danger to aquatic life (Sediment Quality Guidelines, SQG). Cu, Zn and Fe can cause from threshold to extreme effects on aquatic life in anoxic, fine-grained sediments and As can cause threshold effects in all types of sediment around fish farms. Other elements (Cr, Pb, Mn) can also cause unwanted effects when compounded with elevated background levels.

Size distribution in ultraphytoplankton: a comparative analysis of counting methods.

Water samples taken at three depth layers from the offshore oligotrophic Cretan Sea were analyzed for ultraphytoplankton size fractionation using different methods: (a) sequential filtration on filters of pore size 5, 1 and 0.2 microm, (b) separate filtration using filters 5 and 0.2 microm as well as 1 and 0.2 microm and (c) direct filtration on 0.2 microm filters after staining of the samples with DAPI. Total abundance of photosynthetic organisms as well as the abundance of different groups such as flagellates and cyanobacteria measured by means of sizing after DAPI staining were significantly higher than those obtained by the other methods. This indicates that although there were no significant differences between the estimates provided by the separate and sequential filtration, both these methods underestimated total abundance by at least 25-50%. The estimates for the size fractions were also found to range from relatively imprecise to completely unreliable depending on the group and the size range. Although size fractionation through direct observation after staining largely depends on the expertise of the observer, this study suggests that it may provide more informative estimates than the other two methods. Although it is difficult to generalize the results of this study in a global context, the paper provides strong indications on the limitations of the sequential and separate methods for size fractionation of photosynthetic organisms and implies that their results are likely to be less accurate than is presently believed.