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1.
Int J Med Microbiol ; 308(8): 1067-1072, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30146439

ABSTRACT

The appearance of highly pathogenic strains of Shiga toxin (Stx)-producingEscherichia. coli (STEC) has owed largely to the acquisition of Stx-encoding prophages by strains of E. coli that have pre-existing potential as enteric pathogens, such as atypical enteropathogenic E. coli (aEPEC) and enteroaggregative E. coli (EAEC). However, while high pathogenic potential is necessary, it is not sufficient for such strains to have a serious public health impact (i.e., large outbreaks, many cases of HUS, or both). To do so requires susceptible hosts and additional elements related to transmission, such as, socio-economic, societal, and lifestyle, factors. Two examples are discussed to illustrate this. The factors involved in the emergence of serious disease associated with E. coli O157:H7 in the 1980s probably included a massive increase in population exposure to this pathogen, likely as a result of the introduction of factory farming of cattle in the 1960s, and the development and wide patronage of fast food hamburger restaurants, and, potentially, waning immunity to intimin as a result of the reduction of incidence of enteropathogenic E. coli (EPEC) infection. In the devastating outbreak of Stx2-positiveEAEC O104:H4 in 2011, the wide distribution of the proposed vehicle of transmission, imported fenugreek seeds, was decisive in the exposure of a large population in Central Europe to this pathogen. Contributing factors likely included a preference for eating raw sprouts as a healthy food choice by the affected cases, many of whom were women. Low population levels of immunity to Stx2 probably contributed to the severe clinical outcome. A better understanding of the factors responsible for the emergence of potentially dangerous STEC pathogens as well as of extensive and serious disease associated with them can enhance public health strategies to respond to them.


Subject(s)
Communicable Diseases, Emerging/microbiology , Disease Outbreaks , Escherichia coli Infections/microbiology , Escherichia coli O157/pathogenicity , Shiga-Toxigenic Escherichia coli/pathogenicity , Animals , Cattle , Communicable Diseases, Emerging/epidemiology , Communicable Diseases, Emerging/transmission , Escherichia coli Infections/epidemiology , Europe/epidemiology , Fast Foods/microbiology , Female , Humans , Risk Factors , Seedlings/microbiology , Trigonella/microbiology
2.
Clin Infect Dis ; 64(3): 371-376, 2017 Feb 01.
Article in English | MEDLINE | ID: mdl-27986670

ABSTRACT

Emerging public health challenges of Shiga toxin (stx)-producing Escherichia coli (STEC) include the occurrence of more frequent or severe disease and risk factors shifts associated with changes, often interconnected, in the pathogen, the population, and the environment. In 3 outbreaks with heightened severity attributed to enhanced pathogen virulence, including the acquisition of an stx2 phage in 1 outbreak, population and environmental factors likely contributed significantly to disease outcomes. Evolving population risk factors that are associated with more severe disease include consumption of fresh produce, contact with STEC-contaminated environments, demographics, socioeconomic status, and immunity. Risks of increasing STEC environmental pollution are related to continued intensification of agriculture and super-shedder cattle. Mitigation strategies include surveillance and research on emerging STEC, development of effective communications and public education strategies, and improved policies and interventions to mitigate risks, including those related to the contamination of produce and the environment, using a "One Health" approach.


Subject(s)
Communicable Diseases, Emerging/epidemiology , Disease Outbreaks/prevention & control , Escherichia coli Infections/epidemiology , Shiga-Toxigenic Escherichia coli/pathogenicity , Animals , Coliphages , Communicable Diseases, Emerging/microbiology , Disease Outbreaks/statistics & numerical data , Food Microbiology , Humans , Public Health , Risk Factors , Serotyping , Shiga-Toxigenic Escherichia coli/genetics , Shiga-Toxigenic Escherichia coli/virology , United States/epidemiology , Virulence
3.
Am J Clin Nutr ; 95(2): 352-61, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22205312

ABSTRACT

BACKGROUND: High-abundance plasma proteins are involved in disease-associated pathways and are useful in the diagnosis of nutritional and disease states. However, little is known about how concentrations of many plasma proteins vary between individuals from different ethnocultural groups with different dietary habits. OBJECTIVE: We explored the association between plasma proteomic groups, dietary patterns, and ethnicity in the Toronto Nutrigenomics and Health Study, an ethnically diverse population of healthy young adults. DESIGN: Concentrations of 54 high-abundance plasma proteins were measured simultaneously by liquid chromatography/multiple-reaction monitoring-mass spectrometry in 1090 individuals. Principal components analysis was used to identify plasma proteomic groups. Linear regression was used to investigate relations between proteomic groups and previously identified dietary patterns (Western, prudent, Eastern). Differences in individual protein concentrations between ethnocultural groups were tested by using general linear models. RESULTS: Four independent principal components representative of proteomic groups were identified. Principal components 1 and 2 included proteins from multiple pathways. Component 3 was inflammatory, and component 4 included coagulation cascade proteins. East Asians and South Asians had lower component 1 scores, and East Asians had higher component 2 scores. South Asians had higher average scores for component 3. Individual protein concentrations also varied across ethnocultural groups. Principal component 1 was positively associated with the Western dietary pattern and inversely associated with the Eastern pattern. Component 3 was positively associated with the Eastern pattern. CONCLUSIONS: Plasma proteomic groups differ between young adults of diverse ethnocultural groups with different dietary habits. These differences may partly account for different rates of cardiometabolic disease later in life.


Subject(s)
Asian People , Blood Coagulation , Blood Proteins/metabolism , Diet , Inflammation/ethnology , Proteome , White People , Adult , Biomarkers/blood , Chromatography, Liquid , Diet/ethnology , Female , Humans , Linear Models , Male , Mass Spectrometry , Ontario/ethnology , Principal Component Analysis , Proteomics , Young Adult
4.
J Clin Microbiol ; 49(8): 2954-65, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21697324

ABSTRACT

We have developed a Salmonella genoserotyping array (SGSA) which rapidly generates an antigenic formula consistent with the White-Kauffmann-Le Minor scheme, currently the gold standard for Salmonella serotyping. A set of 287 strains representative of 133 Salmonella serovars was assembled to validate the array and to test the array probes for accuracy, specificity, and reproducibility. Initially, 76 known serovars were utilized to validate the specificity and repeatability of the array probes and their expected probe patterns. The SGSA generated the correct serovar designations for 100% of the known subspecies I serovars tested in the validation panel and an antigenic formula consistent with that of the White-Kauffmann-Le Minor scheme for 97% of all known serovars tested. Once validated, the SGSA was assessed against a blind panel of 100 Salmonella enterica subsp. I samples serotyped using traditional methods. In summary, the SGSA correctly identified all of the blind samples as representing Salmonella and successfully identified 92% of the antigens found within the unknown samples. Antigen- and serovar-specific probes, in combination with a pepT PCR for confirmation of S. enterica subsp. Enteritidis determinations, generated an antigenic formula and/or a serovar designation consistent with the White-Kauffmann-Le Minor scheme for 87% of unknown samples tested with the SGSA. Future experiments are planned to test the specificity of the array probes with other Salmonella serovars to demonstrate the versatility and utility of this array as a public health tool in the identification of Salmonella.


Subject(s)
Antigens, Bacterial/genetics , Molecular Typing/methods , Salmonella enterica/classification , Salmonella enterica/genetics , Animals , Genotype , Humans , Reproducibility of Results , Sensitivity and Specificity , Serotyping/methods
5.
Clin Vaccine Immunol ; 18(7): 1052-7, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21593239

ABSTRACT

Escherichia coli O157:H7 is an important zoonotic pathogen, causing hemolytic uremic syndrome (HUS). The colonization of cattle and human hosts is mediated through the action of effectors secreted via a type III secretion system (T3SS). The structural genes for the T3SS and many of the secreted effectors are located on a pathogenicity island called the locus of enterocyte effacement (LEE). We cloned and expressed the genes coding for 66 effectors and purified each to measure the cross-reactivity of type III secreted proteins from Shiga toxin-producing Escherichia coli (STEC) serotypes. These included 37 LEE-encoded proteins and 29 non-LEE effectors. The serological response against each protein was measured by Western blot analysis and enzyme-linked immunosorbent assay (ELISA) using sera from rabbits immunized with type III secreted proteins (T3SPs) from four STEC serotypes, experimentally infected cattle, and human sera from six HUS patients. Twenty proteins were recognized by at least one of the STEC T3SP-vaccinated rabbits by Western blotting. Several structural proteins (EspA, EspB, and EspD) and a number of effectors (Tir, NleA, and TccP) were recognized by O26-, O103-, O111-, and O157-specific sera. Sera from experimentally infected cattle and HUS patients were tested using an ELISA against each of the proteins. Tir, EspB, EspD, EspA, and NleA were recognized by the majority of the samples tested. A number of other proteins also were recognized by individual serum samples. Overall, proteins such as Tir, EspB, EspD, NleA, and EspA were highly immunogenic in vaccinated and naturally infected subjects and could be candidates for a cross-protective STEC vaccine.


Subject(s)
Bacterial Secretion Systems/immunology , Escherichia coli Proteins/immunology , Serotyping , Shiga-Toxigenic Escherichia coli/immunology , Animals , Bacterial Proteins/analysis , Bacterial Proteins/immunology , Cattle , Cross Reactions/immunology , Enzyme-Linked Immunosorbent Assay , Hemolytic-Uremic Syndrome/immunology , Hemolytic-Uremic Syndrome/microbiology , Hemolytic-Uremic Syndrome/therapy , Humans , Immunoassay , Rabbits , Vaccination
6.
BMC Genomics ; 11: 667, 2010 Nov 25.
Article in English | MEDLINE | ID: mdl-21108814

ABSTRACT

BACKGROUND: Adherent and invasive Escherichia coli (AIEC) are commonly found in ileal lesions of Crohn's Disease (CD) patients, where they adhere to intestinal epithelial cells and invade into and survive in epithelial cells and macrophages, thereby gaining access to a typically restricted host niche. Colonization leads to strong inflammatory responses in the gut suggesting that AIEC could play a role in CD immunopathology. Despite extensive investigation, the genetic determinants accounting for the AIEC phenotype remain poorly defined. To address this, we present the complete genome sequence of an AIEC, revealing the genetic blueprint for this disease-associated E. coli pathotype. RESULTS: We sequenced the complete genome of E. coli NRG857c (O83:H1), a clinical isolate of AIEC from the ileum of a Crohn's Disease patient. Our sequence data confirmed a phylogenetic linkage between AIEC and extraintestinal pathogenic E. coli causing urinary tract infections and neonatal meningitis. The comparison of the NRG857c AIEC genome with other pathogenic and commensal E. coli allowed for the identification of unique genetic features of the AIEC pathotype, including 41 genomic islands, and unique genes that are found only in strains exhibiting the adherent and invasive phenotype. CONCLUSIONS: Up to now, the virulence-like features associated with AIEC are detectable only phenotypically. AIEC genome sequence data will facilitate the identification of genetic determinants implicated in invasion and intracellular growth, as well as enable functional genomic studies of AIEC gene expression during health and disease.


Subject(s)
Bacterial Adhesion/genetics , Escherichia coli/genetics , Escherichia coli/pathogenicity , Genome, Bacterial/genetics , Genomics/methods , Sequence Analysis, DNA/methods , Base Sequence , Biological Transport/genetics , Escherichia coli/classification , Genes, Bacterial , Genomic Islands/genetics , Iron/metabolism , Molecular Sequence Data , Mutation/genetics , Phylogeny , Plasmids/genetics , Virulence/genetics , Virulence Factors/genetics
7.
Vet Microbiol ; 140(3-4): 360-70, 2010 Jan 27.
Article in English | MEDLINE | ID: mdl-19410388

ABSTRACT

Escherichia coli O157:H7 and other Verocytotoxin-producing E. coli (VTEC) are zoonotic pathogens associated with food and waterborne illness around the world. E. coli O157:H7 has been implicated in large outbreaks as well as in sporadic cases of haemorrhagic colitis and the sometimes fatal haemolytic uremic syndrome. VTs produced by these bacteria are thought to damage host endothelial cells in small vessels of the intestine, kidney and brain resulting in thrombotic microangiopathy. All VTs have the same subunit structure, glycolipid cell receptor and inhibit protein synthesis. During VTEC infection, it is thought one or more bacterial adhesins initiates colonization and establishes intimate attachment and is responsible for the translocation of a variety of effectors which alter the structure and function of host cells. VTEC are widespread in animals but ruminants are thought to be their natural reservoir. E. coli O157:H7 colonizes the terminal colon of cattle and can be shed in very large numbers by specific herdmates known as "supershedders". Faeces containing these organisms act as a source of contamination for a variety of foods and the environment. Many VTEC control efforts have been investigated along the "farm to fork" continuum including, vaccination of cattle with colonization factors, and the use of novel antimicrobials, such as bacteriocins, chloral hydrate, bacteriophage and substances which disrupt quorum sensing. In addition, many barriers have been developed for use in the slaughter and food processing industry such as steam pasteurization and irradiation. Despite these efforts many scientific, technical and regulatory challenges remain in the control and prevention of VTEC-associated human illness.


Subject(s)
Escherichia coli Infections/microbiology , Escherichia coli Infections/veterinary , Foodborne Diseases/epidemiology , Foodborne Diseases/microbiology , Shiga-Toxigenic Escherichia coli/isolation & purification , Zoonoses/epidemiology , Zoonoses/microbiology , Animals , Anti-Bacterial Agents/therapeutic use , Carrier State/epidemiology , Carrier State/microbiology , Carrier State/therapy , Carrier State/veterinary , Cattle/microbiology , Escherichia coli Infections/epidemiology , Escherichia coli Infections/therapy , Foodborne Diseases/pathology , Humans , Shiga Toxins/chemistry , Shiga Toxins/toxicity
8.
BMC Genomics ; 10: 287, 2009 Jun 29.
Article in English | MEDLINE | ID: mdl-19563677

ABSTRACT

BACKGROUND: Many approaches have been used to study the evolution, population structure and genetic diversity of Escherichia coli O157:H7; however, observations made with different genotyping systems are not easily relatable to each other. Three genetic lineages of E. coli O157:H7 designated I, II and I/II have been identified using octamer-based genome scanning and microarray comparative genomic hybridization (mCGH). Each lineage contains significant phenotypic differences, with lineage I strains being the most commonly associated with human infections. Similarly, a clade of hyper-virulent O157:H7 strains implicated in the 2006 spinach and lettuce outbreaks has been defined using single-nucleotide polymorphism (SNP) typing. In this study an in silico comparison of six different genotyping approaches was performed on 19 E. coli genome sequences from 17 O157:H7 strains and single O145:NM and K12 MG1655 strains to provide an overall picture of diversity of the E. coli O157:H7 population, and to compare genotyping methods for O157:H7 strains. RESULTS: In silico determination of lineage, Shiga-toxin bacteriophage integration site, comparative genomic fingerprint, mCGH profile, novel region distribution profile, SNP type and multi-locus variable number tandem repeat analysis type was performed and a supernetwork based on the combination of these methods was produced. This supernetwork showed three distinct clusters of strains that were O157:H7 lineage-specific, with the SNP-based hyper-virulent clade 8 synonymous with O157:H7 lineage I/II. Lineage I/II/clade 8 strains clustered closest on the supernetwork to E. coli K12 and E. coli O55:H7, O145:NM and sorbitol-fermenting O157 strains. CONCLUSION: The results of this study highlight the similarities in relationships derived from multi-locus genome sampling methods and suggest a "common genotyping language" may be devised for population genetics and epidemiological studies. Future genotyping methods should provide data that can be stored centrally and accessed locally in an easily transferable, informative and extensible format based on comparative genomic analyses.


Subject(s)
Comparative Genomic Hybridization , Escherichia coli O157/genetics , Genome, Bacterial , Genomics/methods , Bacterial Typing Techniques , Cluster Analysis , DNA Fingerprinting , DNA, Bacterial/genetics , Escherichia coli O157/classification , Escherichia coli O157/pathogenicity , Genotype , Oligonucleotide Array Sequence Analysis , Polymorphism, Single Nucleotide , Sequence Analysis, DNA , Virulence
9.
PLoS One ; 4(3): e4889, 2009.
Article in English | MEDLINE | ID: mdl-19293938

ABSTRACT

BACKGROUND: The pathogenesis of enterohemorrhagic Escherichia coli (EHEC) O157:H7 infection is attributed to virulence factors encoded on multiple pathogenicity islands. Previous studies have shown that EHEC O157:H7 modulates host cell signal transduction cascades, independent of toxins and rearrangement of the cytoskeleton. However, the virulence factors and mechanisms responsible for EHEC-mediated subversion of signal transduction remain to be determined. Therefore, the purpose of this study was to first identify differentially regulated genes in response to EHEC O157:H7 grown in the presence of epithelial cells, compared to growth in the absence of epithelial cells (that is, growth in minimal essential tissue culture medium alone, minimal essential tissue culture medium in the presence of 5% CO(2), and Penassay broth alone) and, second, to identify EHEC virulence factors responsible for pathogen modulation of host cell signal transduction. METHODOLOGY/PRINCIPAL FINDINGS: Overnight cultures of EHEC O157:H7 were incubated for 6 hr at 37 degrees C in the presence or absence of confluent epithelial (HEp-2) cells. Total RNA was then extracted and used for microarray analyses (Affymetrix E. coli Genome 2.0 gene chips). Relative to bacteria grown in each of the other conditions, EHEC O157:H7 cultured in the presence of cultured epithelial cells displayed a distinct gene-expression profile. A 2.0-fold increase in the expression of 71 genes and a 2.0-fold decrease in expression of 60 other genes were identified in EHEC O157:H7 grown in the presence of epithelial cells, compared to bacteria grown in media alone. CONCLUSION/SIGNIFICANCE: Microarray analyses and gene deletion identified a protease on O-island 50, gene Z1787, as a potential virulence factor responsible for mediating EHEC inhibition of the interferon (IFN)-gamma-Jak1,2-STAT-1 signal transduction cascade. Up-regulated genes provide novel targets for use in developing strategies to interrupt the infectious process.


Subject(s)
Escherichia coli O157/genetics , Gene Expression Profiling , Genes, Bacterial , Cell Line , Epithelial Cells/microbiology , Escherichia coli O157/growth & development , Escherichia coli O157/pathogenicity , Humans , Oligonucleotide Array Sequence Analysis , Virulence/genetics
10.
Kidney Int Suppl ; (112): S4-7, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19180132

ABSTRACT

Verocytotoxin (VT)-producing Escherichia coli (VTEC) infection is associated with a spectrum of clinical manifestations that includes diarrhea, hemorrhagic colitis, and the hemolytic uremic syndrome (HUS). The occurrence of HUS in a minority of individuals in outbreaks of VTEC infection is a function of several pathogen and host factors. Pathogen factors include the inoculum size and serotype of the infecting strain, horizontally acquired genetic elements known as pathogenicity islands, and probably the VT type. Host factors that increase the risk of developing HUS include age, pre-existing immunity, gastric acidity, the use of antibiotics and anti-motility agents, and, probably, stress and genetic factors that modulate host response to infection, such as innate immunity and toxin receptor type, expression, and distribution. A better understanding of the pathogen and host determinants of HUS can aid in the development of more effective public health strategies to reduce the risk of developing HUS.


Subject(s)
Escherichia coli Infections/microbiology , Escherichia coli O157/pathogenicity , Hemolytic-Uremic Syndrome/microbiology , Shiga Toxins/metabolism , Age Factors , Anti-Bacterial Agents/adverse effects , Antibodies, Bacterial/blood , Escherichia coli O157/genetics , Escherichia coli O157/immunology , Escherichia coli O157/metabolism , Gastric Acid/metabolism , Genetic Predisposition to Disease , Genomic Islands , Humans , Risk Factors , Stress, Physiological , Virulence , Virulence Factors/metabolism
11.
J Bacteriol ; 190(17): 5832-40, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18586943

ABSTRACT

The locus of enterocyte effacement (LEE) and genomic O island 122 (OI-122) are pathogenicity islands in verocytotoxin-producing Escherichia coli (VTEC) serotypes that are associated with outbreaks and serious disease. Composed of three modules, OI-122 may occur as "complete" (with all three modules) or "incomplete" (with one or two modules) in different strains. OI-122 encodes two non-LEE effector (Nle) molecules that are secreted by the LEE type III secretion system, and LEE and OI-122 are cointegrated in some VTEC strains. Thus, they are functionally linked, but little is known about the patterns of acquisition of these codependent islands. To examine this, we conducted a population genetics analysis, using multilocus sequence typing (MLST), with 72 VTEC strains (classified into seropathotypes A to E) and superimposed on the results the LEE and OI-122 contents of these organisms. The wide distribution of LEE and OI-122 modules among MLST clonal groups corroborates the hypothesis that there has been lateral transfer of both pathogenicity islands. Sequence analysis of a pagC-like gene in OI-122 module 1 also revealed two nonsynonymous single-nucleotide polymorphisms that could help discriminate a subset of seropathotype C strains and determine the presence of the LEE. A nonsense mutation was found in this gene in five less virulent strains, consistent with a decaying or inactive gene. The modular nature of OI-122 could be explained by the acquisition of modules by lateral transfer, either singly or as a group, and by degeneration of genes within modules. Correlations between clonal group, seropathotype, and LEE and OI-122 content provide insight into the role of genomic islands in VTEC evolution.


Subject(s)
Escherichia coli/genetics , Evolution, Molecular , Genomic Islands/genetics , Shiga Toxins/metabolism , Animals , Cattle , Escherichia coli/metabolism , Escherichia coli/pathogenicity , Gene Transfer, Horizontal , Genes, Bacterial/genetics , Humans , Models, Genetic , Sequence Analysis, DNA , Virulence/genetics
13.
Appl Environ Microbiol ; 74(7): 2153-60, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18245257

ABSTRACT

Shiga toxin-producing Escherichia coli (STEC) strains are commensal bacteria in cattle with high potential for environmental and zoonotic transmission to humans. Although O157:H7 is the most common STEC serotype, there is growing concern over the emergence of more than 200 highly virulent non-O157 STEC serotypes that are globally distributed, several of which are associated with outbreaks and/or severe human illness such as hemolytic-uremic syndrome (HUS) and hemorrhagic colitis. At present, the underlying genetic basis of virulence potential in non-O157 STEC is unknown, although horizontal gene transfer and the acquisition of new pathogenicity islands are an expected origin. We used seropathotype classification as a framework to identify genetic elements that distinguish non-O157 STEC strains posing a serious risk to humans from STEC strains that are not associated with severe and epidemic disease. We report the identification of three genomic islands encoding non-LEE effector (nle) genes and 14 individual nle genes in non-O157 STEC strains that correlate independently with outbreak and HUS potential in humans. The implications for transmissible zoonotic spread and public health are discussed. These results and methods offer a molecular risk assessment strategy to rapidly recognize and respond to non-O157 STEC strains from environmental and animal sources that might pose serious public health risks to humans.


Subject(s)
Escherichia coli Infections/diagnosis , Genomic Islands/genetics , Hemolytic-Uremic Syndrome/microbiology , Shiga-Toxigenic Escherichia coli/classification , Virulence Factors/genetics , Animals , Colon/microbiology , Genes, Bacterial , Genomic Islands/physiology , Hemolytic-Uremic Syndrome/epidemiology , Humans , Public Health , Shiga Toxins/biosynthesis , Shiga-Toxigenic Escherichia coli/genetics , Shiga-Toxigenic Escherichia coli/isolation & purification
14.
Appl Environ Microbiol ; 74(5): 1671-5, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18165362

ABSTRACT

Two phylogenetic methods (multilocus sequence typing [MLST] and a multiplex PCR) were investigated to determine whether phylogenetic classification of verocytotoxin-producing Escherichia coli serotypes correlates with their classification into groups (seropathotypes A to E) based on their relative incidence in human disease and on their association with outbreaks and serious complications. MLST was able to separate 96% of seropathotype D and E serotypes from those that cause serious disease (seropathotypes A to C), whereas the multiplex PCR lacked this level of seropathotype discrimination.


Subject(s)
Escherichia coli/classification , Escherichia coli/genetics , Phylogeny , Polymerase Chain Reaction/methods , Shiga Toxin 1/metabolism , Base Sequence , Cluster Analysis , Escherichia coli/metabolism , Escherichia coli/pathogenicity , Genes, Bacterial/genetics , Models, Genetic , Molecular Sequence Data , Public Health/methods , Sequence Alignment , Sequence Analysis, DNA , Species Specificity , Virulence
15.
J Clin Microbiol ; 45(11): 3771-3, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17804662

ABSTRACT

A coinfection of O177:NM and O55:H7 Shiga toxin-producing Escherichia coli (STEC) was identified for a child with acute bloody diarrhea and hemolytic uremic syndrome by using culture and serotype-specific molecular reagents. The profile of O157-related genetic islands revealed that the O55:H7 isolate was highly similar to O157 STEC whereas the O177:NM isolate lacked several fimbrial O islands and non-locus-of-enterocyte-effacement effector determinants. However, both STEC serotypes are known to cause serious disease, and the significant repertoire of virulence determinants in both strains made it impossible to determine their individual contributions to the clinical symptoms.


Subject(s)
Shiga-Toxigenic Escherichia coli/isolation & purification , Base Sequence , Child, Preschool , Hemolytic-Uremic Syndrome/microbiology , Humans , Molecular Sequence Data , Serotyping , Shiga-Toxigenic Escherichia coli/classification , Shiga-Toxigenic Escherichia coli/genetics
16.
Microbes Infect ; 9(3): 400-7, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17317262

ABSTRACT

Severe disease caused by Shiga toxin-producing Escherichia coli (STEC) has been associated with a pathogenicity island, O-Island 122, which encodes the type III secretion system-effector NleE. Here we show that full virulence of the related attaching and effacing mouse pathogen Citrobacter rodentium requires NleE. Relative to wild-type bacteria, nleE-mutant C. rodentium are attenuated for colonisation in mice in both single and mixed infections. Examination of the ability of nleE-mutant bacteria to induce pathologic change in vivo revealed that nleE-mutant bacteria induce significantly less pathologic change than wild-type bacteria in susceptible mice. Consistent with these results, mice infected with nleE-mutant bacteria exhibit delayed mortality. These results suggested that pathologic change during attaching and effacing pathogen infection may associate with the degree of pathogen colonisation. Using mutants of 23 type III secretion genes, including the type III effectors nleC, nleD, nleE and nleF, the association of pathologic change with the ability of these mutants to colonise mice was examined. The induction of in vivo disease correlates strongly with the degree of colonisation, suggesting that the colonisation advantage type III secretion genes afford the bacteria, contribute to, and are required for, full virulence.


Subject(s)
Bacterial Proteins , Citrobacter rodentium/physiology , Citrobacter rodentium/pathogenicity , Genomic Islands , Virulence Factors , Amino Acid Sequence , Animals , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Citrobacter rodentium/genetics , Colon/microbiology , Colon/pathology , Conserved Sequence , Enterobacteriaceae Infections/microbiology , Enterobacteriaceae Infections/pathology , Mice , Mice, Inbred C3H , Mice, Inbred C57BL , Molecular Sequence Data , Mutation , Virulence , Virulence Factors/chemistry , Virulence Factors/genetics , Virulence Factors/metabolism
17.
Microb Pathog ; 42(2-3): 62-71, 2007.
Article in English | MEDLINE | ID: mdl-17174521

ABSTRACT

Verotoxin-producing Escherichia coli (VTEC) O157:H7 inhibits interferon-gamma-stimulated tyrosine phosphorylation of signal transducer and activator of transcription (Stat)-1 in epithelial cells, independent of Verotoxins and the locus of enterocyte effacement pathogenicity island. Although E. coli O157:H7 is the major cause of disease in humans, non-O157:H7 VTEC also cause human disease. However, the virulence properties of non-O157:H7 VTEC are less well characterized. The aims of this study were to define the ability of VTEC strains of differing seropathotypes (classified as A-E) to inhibit interferon-gamma stimulated Stat1-phosphorylation and to further characterize the bacterial-derived inhibitory factor. Confluent T84 and HEp-2 cells were infected with VTEC strains (MOI 100:1, 6h, 37 degrees C), and then stimulated with interferon-gamma (50 ng/mL) for 0.5h at 37 degrees C. Whole-cell protein extracts of infected cells were collected and prepared for immunoblotting to detect tyrosine phosphorylation of Stat1. The effects of E. coli O55 strains, the evolutionary precursors of VTEC, on Stat1-tyrosine phosphorylation were also determined. The effects of isogenic mutants of O-islands 47 and 122 were tested to determine the role of genes encoded on these putative pathogenicity islands in mediating VTEC inhibition of the interferon-gamma-Stat1 signaling cascade. To evaluate potential mechanism(s) of inhibition, VTEC O157:H7-infected cells were treated with pharmacological inhibitors, including, wortmannin and LY294002. Relative to uninfected cells, Stat1-tyrosine phosphorylation was significantly reduced after 6h infection of both T84 and HEp-2 cells by VTEC strains of all five seropathotypes. E. coli O55 strains, but not enteropathogenic E. coli (EPEC), also caused inhibition of Stat1-tyrosine phosphorylation, suggesting that this effect was acquired early in the evolution of VTEC. Stat1-activation did not recover in epithelial cells infected with isogenic mutants of O-islands 47 and 122, indicating that the inhibitory factor was not contained in these genomic regions. Stat1-phosphorylation remained intact when VTEC-infected cells were treated with wortmannin (0-100 nM), but not by treatment with the more specific PI3-kinase inhibitor, LY294002. Inhibition of interferon-gamma stimulated Stat1-tyrosine phosphorylation by VTEC of multiple seropathotypes indicates the presence of a common inhibitory factor that is independent of bacterial virulence in humans. The results of treatment with wortmannin suggest that the bacterial-derived inhibitory factor employs host cell signal transduction to mediate inhibition of Stat1-activation.


Subject(s)
Escherichia coli Infections/metabolism , Escherichia coli/metabolism , Interferon-gamma/metabolism , STAT1 Transcription Factor/metabolism , Signal Transduction , Androstadienes/pharmacology , Cell Line, Tumor , Chromones/pharmacology , Enzyme Inhibitors/pharmacology , Escherichia coli/classification , Escherichia coli/pathogenicity , Genomic Islands/genetics , Humans , Morpholines/pharmacology , Mutation , Phosphatidylinositol 3-Kinases/pharmacology , Phosphoinositide-3 Kinase Inhibitors , Phosphorylation/drug effects , Shiga Toxins/metabolism , Species Specificity , Tyrosine/metabolism , Virulence , Wortmannin
18.
J Infect Dis ; 194(6): 819-27, 2006 Sep 15.
Article in English | MEDLINE | ID: mdl-16941350

ABSTRACT

Although O157:H7 Shiga toxin-producing Escherichia coli (STEC) are the predominant cause of hemolytic-uremic syndrome (HUS) in the world, non-O157:H7 serotypes are a medically important cause of HUS that are underdetected by current diagnostic approaches. Because Shiga toxin is necessary but not sufficient to cause HUS, identifying the virulence determinants that predict severe disease after non-O157 STEC infection is of paramount importance. Disease caused by O157:H7 STEC has been associated with a 26-gene pathogenicity island known as O island (OI) 122. To assess the public-health significance of this pathogenicity island, we examined the association between OI122 genes and outbreaks and HUS after non-O157 STEC infection. We found that a subset of OI122 genes is independently associated with outbreaks and HUS after infection with non-O157 STEC. The presence of multiple virulence genes in non-O157 serotypes strengthened this association, which suggests that the additive effects of a variable repertoire of virulence genes contribute to disease severity. In vivo, Citrobacter rodentium mutants lacking outbreak- and HUS-associated genes were deficient for virulence in mice; in particular, nleB mutant bacteria were unable to cause mortality in mice. The present study shows that virulence genes associated epidemiologically with outbreaks and HUS after non-O157 STEC infection are pivotal to the initiation, progression, and outcome of in vivo disease.


Subject(s)
Escherichia coli Infections/microbiology , Escherichia coli/genetics , Genomic Islands/genetics , Hemolytic-Uremic Syndrome/microbiology , Animals , Citrobacter rodentium/genetics , Citrobacter rodentium/pathogenicity , Colon/microbiology , DNA Primers , Disease Models, Animal , Disease Outbreaks , Escherichia coli/pathogenicity , Escherichia coli Infections/epidemiology , Genomic Islands/physiology , Hemolytic-Uremic Syndrome/epidemiology , Mice , Mice, Inbred C3H , Mice, Inbred C57BL , Prevalence , Shiga Toxins/biosynthesis , Survival Analysis , Time Factors , Virulence/genetics , Virulence Factors/genetics
19.
J Clin Microbiol ; 43(8): 3840-50, 2005 Aug.
Article in English | MEDLINE | ID: mdl-16081921

ABSTRACT

Verocytotoxin-producing Escherichia coli causes zoonotic food- or waterborne infection that may be associated with massive outbreaks and with the serious complication of hemolytic uremic syndrome (HUS). Serotypes O157:H7 and O157:NM are more commonly associated with HUS and outbreaks than other serotypes, such as O26:H11. To determine whether a genetic basis exists for why serotype O157:H7/NM causes HUS and outbreaks more often than other serotypes, such as O26:H11, we conducted suppression subtractive hybridization (SSH) between the genomes of the sequenced O157:H7 strain EDL933 and CL1, a clinical serotype O26:H11 isolate. Genes from four EDL933 fimbria-encoding genomic O islands (OIs) (OI-1, -47, -141, and -154) were identified in the SSH library. OI-47 encodes several additional putative virulence factors, including secreted and signaling proteins, a hemolysin locus, a lipoprotein, an ABC transport system, and a lipid biosynthesis locus. The distribution of the OIs was investigated by PCR and Southern hybridization (when PCR was negative) with 69 VTEC strains belonging to 39 different serotypes corresponding to 5 seropathotypes that differ in their disease and epidemic potential. The four OIs described here were distributed almost exclusively in serotypes O157:H7 and O157:NM, which indicates that they may be associated with the ability of these strains to colonize human and/or animal intestinal tracts and to cause epidemic and serious disease more frequently than other serotypes. The occurrence of the four OIs in enteropathogenic E. coli O55:H7 strains is consistent with their vertical inheritance by VTEC O157:H7/NM from this clonally related ancestor.


Subject(s)
Escherichia coli O157/pathogenicity , Fimbriae, Bacterial/genetics , Genomic Islands , Shiga Toxins/biosynthesis , Escherichia coli O157/classification , Gene Library
20.
Infect Immun ; 73(7): 4327-37, 2005 Jul.
Article in English | MEDLINE | ID: mdl-15972527

ABSTRACT

Enteropathogenic Escherichia coli (EPEC) is a major bacterial cause of infantile diarrhea in developing countries and is the prototype for a group of gastrointestinal pathogens causing characteristic attaching and effacing (A/E) histopathology on intestinal epithelia. A/E pathogens utilize a type III secretion system (TTSS), encoded by the locus of enterocyte effacement (LEE) pathogenicity island, to deliver effector proteins into host cells. Here, we investigate sequence divergence of the LEE-encoded SepZ protein and identify it as a TTSS-secreted and -translocated molecule. SepZ is hypervariable among A/E pathogens, with sequences sharing between 60 to 81% amino acid identity with SepZ of EPEC. A SepZ-CyaA fusion was secreted and translocated into HeLa cells in a TTSS-dependent manner. Additionally, we determined that the first 20 amino acids of SepZ were sufficient to direct its translocation. In contrast to previous studies suggesting a role in invasion and the structure and/or regulation of the TTSS, we found that SepZ does not mediate uptake of EPEC into host cells or affect translocation and tyrosine phosphorylation of the translocated intimin receptor. Immunohistochemistry reveals that, after an extended HeLa cell infection, accumulated SepZ can be detected beneath the site of bacterial attachment in a subset of pedestal regions. To indicate its newly identified status as a translocated effector protein, we propose to rename SepZ as EspZ.


Subject(s)
Escherichia coli Proteins/metabolism , Escherichia coli/pathogenicity , Adenylate Cyclase Toxin/metabolism , Amino Acid Sequence , Base Sequence , Escherichia coli/metabolism , Escherichia coli Proteins/chemistry , Gentamicins/pharmacology , HeLa Cells , Humans , Microscopy, Fluorescence , Molecular Sequence Data , Protein Transport , Receptors, Cell Surface/metabolism
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