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1.
Nat Commun ; 15(1): 4137, 2024 May 16.
Article in English | MEDLINE | ID: mdl-38755162

ABSTRACT

Individuals' socio-demographic and economic characteristics crucially shape the spread of an epidemic by largely determining the exposure level to the virus and the severity of the disease for those who got infected. While the complex interplay between individual characteristics and epidemic dynamics is widely recognised, traditional mathematical models often overlook these factors. In this study, we examine two important aspects of human behaviour relevant to epidemics: contact patterns and vaccination uptake. Using data collected during the COVID-19 pandemic in Hungary, we first identify the dimensions along which individuals exhibit the greatest variation in their contact patterns and vaccination uptake. We find that generally higher socio-economic groups of the population have a higher number of contacts and a higher vaccination uptake with respect to disadvantaged groups. Subsequently, we propose a data-driven epidemiological model that incorporates these behavioural differences. Finally, we apply our model to analyse the fourth wave of COVID-19 in Hungary, providing valuable insights into real-world scenarios. By bridging the gap between individual characteristics and epidemic spread, our research contributes to a more comprehensive understanding of disease dynamics and informs effective public health strategies.


Subject(s)
COVID-19 Vaccines , COVID-19 , SARS-CoV-2 , Socioeconomic Factors , Vaccination , Humans , COVID-19/epidemiology , COVID-19/prevention & control , Hungary/epidemiology , SARS-CoV-2/immunology , Vaccination/statistics & numerical data , COVID-19 Vaccines/administration & dosage , Female , Male , Pandemics/prevention & control , Adult , Epidemiological Models , Middle Aged , Epidemics , Aged
2.
Child Dev Perspect ; 18(1): 36-43, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38515828

ABSTRACT

Most children first enter social groups of peers in preschool. In this context, children use movement as a social tool, resulting in distinctive proximity patterns in space and synchrony with others over time. However, the social implications of children's movements with peers in space and time are difficult to determine due to the difficulty of acquiring reliable data during natural interactions. In this article, we review research demonstrating that proximity and synchrony are important indicators of affiliation among preschoolers and highlight challenges in this line of research. We then argue for the advantages of using wearable sensor technology and machine learning analytics to quantify social movement. This technological and analytical advancement provides an unprecedented view of complex social interactions among preschoolers in natural settings, and can help integrate young children's movements with others in space and time into a coherent interaction framework.

3.
Proc Natl Acad Sci U S A ; 120(50): e2305285120, 2023 Dec 12.
Article in English | MEDLINE | ID: mdl-38060564

ABSTRACT

Socioeconomic segregation patterns in networks usually evolve gradually, yet they can change abruptly in response to external shocks. The recent COVID-19 pandemic and the subsequent government policies induced several interruptions in societies, potentially disadvantaging the socioeconomically most vulnerable groups. Using large-scale digital behavioral observations as a natural laboratory, here we analyze how lockdown interventions lead to the reorganization of socioeconomic segregation patterns simultaneously in communication and mobility networks in Sierra Leone. We find that while segregation in mobility clearly increased during lockdown, the social communication network reorganized into a less segregated configuration as compared to reference periods. Moreover, due to differences in adaption capacities, the effects of lockdown policies varied across socioeconomic groups, leading to different or even opposite segregation patterns between the lower and higher socioeconomic classes. Such secondary effects of interventions need to be considered for better and more equitable policies.


Subject(s)
COVID-19 , Social Segregation , Humans , Pandemics , COVID-19/epidemiology , Sierra Leone , Socioeconomic Factors
4.
Sci Rep ; 13(1): 21452, 2023 12 05.
Article in English | MEDLINE | ID: mdl-38052841

ABSTRACT

Monitoring the effective reproduction number [Formula: see text] of a rapidly unfolding pandemic in real-time is key to successful mitigation and prevention strategies. However, existing methods based on case numbers, hospital admissions or fatalities suffer from multiple measurement biases and temporal lags due to high test positivity rates or delays in symptom development or administrative reporting. Alternative methods such as web search and social media tracking are less directly indicating epidemic prevalence over time. We instead record age-stratified anonymous contact matrices at a daily resolution using a longitudinal online-offline survey in Hungary during the first two waves of the COVID-19 pandemic. This approach is innovative, cheap, and provides information in near real-time for estimating [Formula: see text] at a daily resolution. Moreover, it allows to complement traditional surveillance systems by signaling periods when official monitoring infrastructures are unreliable due to observational biases.


Subject(s)
COVID-19 , Humans , COVID-19/epidemiology , Pandemics , Basic Reproduction Number , Hospitalization , Hungary
5.
Front Big Data ; 5: 1006352, 2022.
Article in English | MEDLINE | ID: mdl-36479588

ABSTRACT

Ending poverty in all its forms everywhere is the number one Sustainable Development Goal of the UN 2030 Agenda. To monitor the progress toward such an ambitious target, reliable, up-to-date and fine-grained measurements of socioeconomic indicators are necessary. When it comes to socioeconomic development, novel digital traces can provide a complementary data source to overcome the limits of traditional data collection methods, which are often not regularly updated and lack adequate spatial resolution. In this study, we collect publicly available and anonymous advertising audience estimates from Facebook to predict socioeconomic conditions of urban residents, at a fine spatial granularity, in four large urban areas: Atlanta (USA), Bogotá (Colombia), Santiago (Chile), and Casablanca (Morocco). We find that behavioral attributes inferred from the Facebook marketing platform can accurately map the socioeconomic status of residential areas within cities, and that predictive performance is comparable in both high and low-resource settings. Our work provides additional evidence of the value of social advertising media data to measure human development and it also shows the limitations in generalizing the use of these data to make predictions across countries.

6.
Sci Data ; 9(1): 777, 2022 12 22.
Article in English | MEDLINE | ID: mdl-36550122

ABSTRACT

DyLNet is a large-scale longitudinal social experiment designed to observe the relations between child socialisation and oral language learning at preschool. During three years, a complete preschool in France was followed to record proximity interactions of about 200 children and adults every 5 seconds using autonomous Radio Frequency Identification Wireless Proximity Sensors. Data was collected monthly with one week-long deployments. In parallel, survey campaigns were carried out to record the socio-demographic and language background of children and their families, and to monitor the linguistic skills of the pupils at regular intervals. From data we inferred real social interactions and distinguished inter- and intra-class interactions in different settings. We share ten weeks of cleaned, pre-processed and reconstructed interaction data recorded over a complete school year, together with two sets of survey data providing details about the pupils' socio-demographic profile and language development level at the beginning and end of this period. Our dataset may stimulate researchers from several fields to study the simultaneous development of language and social interactions of children.


Subject(s)
Language Development , Schools , Social Networking , Child , Child, Preschool , Humans , Language , Surveys and Questionnaires
7.
Sci Rep ; 12(1): 13293, 2022 08 02.
Article in English | MEDLINE | ID: mdl-35918372

ABSTRACT

Many countries have secured larger quantities of COVID-19 vaccines than their population is willing to take. The abundance and the large variety of vaccines created not only an unprecedented intensity of vaccine related public discourse, but also a historical moment to understand vaccine hesitancy better. Yet, the heterogeneity of hesitancy by vaccine types has been neglected in the existing literature so far. We address this problem by analysing the acceptance and the assessment of five vaccine types. We use information collected with a nationally representative survey at the end of the third wave of the COVID-19 pandemic in Hungary. During the vaccination campaign, individuals could reject the assigned vaccine to wait for a more preferred alternative that enables us to quantify revealed preferences across vaccine types. We find that hesitancy is heterogenous by vaccine types and is driven by individuals' trusted source of information. Believers of conspiracy theories are more likely to evaluate the mRNA vaccines (Pfizer and Moderna) unacceptable. Those who follow the advice of politicians are more likely to evaluate vector-based (AstraZeneca and Sputnik) or whole-virus vaccines (Sinopharm) acceptable. We argue that the greater selection of available vaccine types and the free choice of the individual are desirable conditions to increase the vaccination rate in societies.


Subject(s)
COVID-19 , Urogenital Abnormalities , Vaccines , Viral Vaccines , COVID-19/epidemiology , COVID-19/prevention & control , COVID-19 Vaccines , Humans , Pandemics , Patient Acceptance of Health Care , Vaccination
8.
Phys Rev E ; 105(5-1): 054313, 2022 May.
Article in English | MEDLINE | ID: mdl-35706217

ABSTRACT

The event graph representation of temporal networks suggests that the connectivity of temporal structures can be mapped to a directed percolation problem. However, similarly to percolation theory on static networks, this mapping is valid under the approximation that the structure and interaction dynamics of the temporal network are determined by its local properties, and, otherwise, it is maximally random. We challenge these conditions and demonstrate the robustness of this mapping in case of more complicated systems. We systematically analyze random and regular network topologies and heterogeneous link-activation processes driven by bursty renewal or self-exciting processes using numerical simulation and finite-size scaling methods. We find that the critical percolation exponents characterizing the temporal network are not sensitive to many structural and dynamical network heterogeneities, while they recover known scaling exponents characterizing directed percolation on low-dimensional lattices. While it is not possible to demonstrate the validity of this mapping for all temporal network models, our results establish the first batch of evidence supporting the robustness of the scaling relationships in the limited-time reachability of temporal networks.

10.
Sci Rep ; 12(1): 4690, 2022 03 18.
Article in English | MEDLINE | ID: mdl-35304478

ABSTRACT

The unprecedented behavioural responses of societies have been evidently shaping the COVID-19 pandemic, yet it is a significant challenge to accurately monitor the continuously changing social mixing patterns in real-time. Contact matrices, usually stratified by age, summarise interaction motifs efficiently, but their collection relies on conventional representative survey techniques, which are expensive and slow to obtain. Here we report a data collection effort involving over [Formula: see text] of the Hungarian population to simultaneously record contact matrices through a longitudinal online and sequence of representative phone surveys. To correct non-representative biases characterising the online data, by using census data and the representative samples we develop a reconstruction method to provide a scalable, cheap, and flexible way to dynamically obtain closer-to-representative contact matrices. Our results demonstrate that although some conventional socio-demographic characters correlate significantly with the change of contact numbers, the strongest predictors can be collected only via surveys techniques and combined with census data for the best reconstruction performance. We demonstrate the potential of combined online-offline data collections to understand the changing behavioural responses determining the future evolution of the outbreak, and to inform epidemic models with crucial data.


Subject(s)
COVID-19 , Pandemics , COVID-19/epidemiology , Censuses , Disease Outbreaks , Humans , Surveys and Questionnaires
11.
JMIR Res Protoc ; 11(3): e34421, 2022 Mar 29.
Article in English | MEDLINE | ID: mdl-35348465

ABSTRACT

BACKGROUND: Cannabis use has increased in Canada since its legalization in 2018, including among pregnant women who may be motivated to use cannabis to reduce symptoms of nausea and vomiting. However, a growing body of research suggests that cannabis use during pregnancy may harm the developing fetus. As a result, patients increasingly seek medical advice from online sources, but these platforms may also spread anecdotal descriptions or misinformation. Given the possible disconnect between online messaging and evidence-based research about the effects of cannabis use during pregnancy, there is a potential for advice taken from social media to affect the health of mothers and their babies. OBJECTIVE: This study aims to quantify the volume and tone of English language posts related to cannabis use in pregnancy from January 2012 to December 2021. METHODS: Modeling published frameworks for scoping reviews, we will collect publicly available posts from Twitter that mention cannabis use during pregnancy and use the Twitter Application Programming Interface for Academic Research to extract data from tweets, including public metrics such as the number of likes, retweets, and quotes, as well as health effect mentions, sentiment, location, and users' interests. These data will be used to quantify how cannabis use during pregnancy is discussed on Twitter and to build a qualitative profile of supportive and opposing posters. RESULTS: The CHEO Research Ethics Board reviewed our project and granted an exemption in May 2021. As of December 2021, we have gained approval to use the Twitter Application Programming Interface for Academic Research and have developed a preliminary search strategy that returns over 3 million unique tweets posted between 2012 and 2021. CONCLUSIONS: Understanding how Twitter is being used to discuss cannabis use during pregnancy will help public health agencies and health care providers assess the messaging patients may be receiving and develop communication strategies to counter misinformation, especially in geographical regions where legalization is recent or imminent. Most importantly, we foresee that our findings will assist expecting families in making informed choices about where they choose to access advice about using cannabis during pregnancy. TRIAL REGISTRATION: Open Science Framework 10.17605/OSF.IO/BW8DA; www.osf.io/6fb2e. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): PRR1-10.2196/34421.

12.
Sci Rep ; 11(1): 20829, 2021 10 21.
Article in English | MEDLINE | ID: mdl-34675333

ABSTRACT

Millions commute to work every day in cities and interact with colleagues, partners, friends, and strangers. Commuting facilitates the mixing of people from distant and diverse neighborhoods, but whether this has an imprint on social inclusion or instead, connections remain assortative is less explored. In this paper, we aim to better understand income sorting in social networks inside cities and investigate how commuting distance conditions the online social ties of Twitter users in the 50 largest metropolitan areas of the United States. An above-median commuting distance in cities is linked to more diverse individual networks, moreover, we find that longer commutes are associated with a nearly uniform, moderate reduction of overall social tie assortativity across all cities. This suggests a universal relation between long-distance commutes and the integration of social networks. Our results inform policy that facilitating access across distant neighborhoods can advance the social inclusion of low-income groups.

13.
Proc Natl Acad Sci U S A ; 118(41)2021 10 12.
Article in English | MEDLINE | ID: mdl-34620714

ABSTRACT

It is a fundamental question in disease modeling how the initial seeding of an epidemic, spreading over a network, determines its final outcome. One important goal has been to find the seed configuration, which infects the most individuals. Although the identified optimal configurations give insight into how the initial state affects the outcome of an epidemic, they are unlikely to occur in real life. In this paper we identify two important seeding scenarios, both motivated by historical data, that reveal a complex phenomenon. In one scenario, the seeds are concentrated on the central nodes of a network, while in the second one, they are spread uniformly in the population. Comparing the final size of the epidemic started from these two initial conditions through data-driven and synthetic simulations on real and modeled geometric metapopulation networks, we find evidence for a switchover phenomenon: When the basic reproduction number [Formula: see text] is close to its critical value, more individuals become infected in the first seeding scenario, but for larger values of [Formula: see text], the second scenario is more dangerous. We find that the switchover phenomenon is amplified by the geometric nature of the underlying network and confirm our results via mathematically rigorous proofs, by mapping the network epidemic processes to bond percolation. Our results expand on the previous finding that, in the case of a single seed, the first scenario is always more dangerous and further our understanding of why the sizes of consecutive waves of a pandemic can differ even if their epidemic characters are similar.


Subject(s)
Basic Reproduction Number , COVID-19/transmission , Communicable Diseases/epidemiology , Communicable Diseases/transmission , Epidemics/statistics & numerical data , Humans , Hungary/epidemiology , SARS-CoV-2/pathogenicity
14.
Sci Rep ; 11(1): 7028, 2021 03 29.
Article in English | MEDLINE | ID: mdl-33782492

ABSTRACT

Human social interactions in local settings can be experimentally detected by recording the physical proximity and orientation of people. Such interactions, approximating face-to-face communications, can be effectively represented as time varying social networks with links being unceasingly created and destroyed over time. Traditional analyses of temporal networks have addressed mostly pairwise interactions, where links describe dyadic connections among individuals. However, many network dynamics are hardly ascribable to pairwise settings but often comprise larger groups, which are better described by higher-order interactions. Here we investigate the higher-order organizations of temporal social networks by analyzing five publicly available datasets collected in different social settings. We find that higher-order interactions are ubiquitous and, similarly to their pairwise counterparts, characterized by heterogeneous dynamics, with bursty trains of rapidly recurring higher-order events separated by long periods of inactivity. We investigate the evolution and formation of groups by looking at the transition rates between different higher-order structures. We find that in more spontaneous social settings, group are characterized by slower formation and disaggregation, while in work settings these phenomena are more abrupt, possibly reflecting pre-organized social dynamics. Finally, we observe temporal reinforcement suggesting that the longer a group stays together the higher the probability that the same interaction pattern persist in the future. Our findings suggest the importance of considering the higher-order structure of social interactions when investigating human temporal dynamics.

15.
Nat Commun ; 12(1): 133, 2021 01 08.
Article in English | MEDLINE | ID: mdl-33420016

ABSTRACT

Burstiness, the tendency of interaction events to be heterogeneously distributed in time, is critical to information diffusion in physical and social systems. However, an analytical framework capturing the effect of burstiness on generic dynamics is lacking. Here we develop a master equation formalism to study cascades on temporal networks with burstiness modelled by renewal processes. Supported by numerical and data-driven simulations, we describe the interplay between heterogeneous temporal interactions and models of threshold-driven and epidemic spreading. We find that increasing interevent time variance can both accelerate and decelerate spreading for threshold models, but can only decelerate epidemic spreading. When accounting for the skewness of different interevent time distributions, spreading times collapse onto a universal curve. Our framework uncovers a deep yet subtle connection between generic diffusion mechanisms and underlying temporal network structures that impacts a broad class of networked phenomena, from spin interactions to epidemic contagion and language dynamics.

16.
Phys Rev E ; 101(5-1): 052303, 2020 May.
Article in English | MEDLINE | ID: mdl-32575201

ABSTRACT

Time-limited states characterize many dynamical processes on networks: disease-infected individuals recover after some time, people forget news spreading on social networks, or passengers may not wait forever for a connection. These dynamics can be described as limited-waiting-time processes, and they are particularly important for systems modeled as temporal networks. These processes have been studied via simulations, which is equivalent to repeatedly finding all limited-waiting-time temporal paths from a source node and time. We propose a method yielding an orders-of-magnitude more efficient way of tracking the reachability of such temporal paths. Our method gives simultaneous estimates of the in- or out-reachability (with any chosen waiting-time limit) from every possible starting point and time. It works on very large temporal networks with hundreds of millions of events on current commodity computing hardware. This opens up the possibility to analyze reachability and dynamics of spreading processes on large temporal networks in completely new ways. For example, one can now compute centralities based on global reachability for all events or can find with high probability the infected node and time, which would lead to the largest epidemic outbreak.

17.
Sci Rep ; 10(1): 7164, 2020 04 28.
Article in English | MEDLINE | ID: mdl-32346033

ABSTRACT

Network embedding techniques are powerful to capture structural regularities in networks and to identify similarities between their local fabrics. However, conventional network embedding models are developed for static structures, commonly consider nodes only and they are seriously challenged when the network is varying in time. Temporal networks may provide an advantage in the description of real systems, but they code more complex information, which could be effectively represented only by a handful of methods so far. Here, we propose a new method of event embedding of temporal networks, called weg2vec, which builds on temporal and structural similarities of events to learn a low dimensional representation of a temporal network. This projection successfully captures latent structures and similarities between events involving different nodes at different times and provides ways to predict the final outcome of spreading processes unfolding on the temporal structure.

18.
Phys Rev E ; 100(4-1): 040301, 2019 Oct.
Article in English | MEDLINE | ID: mdl-31770919

ABSTRACT

Models of threshold driven contagion explain the cascading spread of information, behavior, systemic risk, and epidemics on social, financial, and biological networks. At odds with empirical observations, these models predict that single-layer unweighted networks become resistant to global cascades after reaching sufficient connectivity. We investigate threshold driven contagion on weight heterogeneous multiplex networks and show that they can remain susceptible to global cascades at any level of connectivity, and with increasing edge density pass through alternating phases of stability and instability in the form of reentrant phase transitions of contagion. Our results provide a theoretical explanation for the observation of large-scale contagion in highly connected but heterogeneous networks.

19.
Sci Rep ; 8(1): 12357, 2018 08 17.
Article in English | MEDLINE | ID: mdl-30120278

ABSTRACT

The dynamics of diffusion-like processes on temporal networks are influenced by correlations in the times of contacts. This influence is particularly strong for processes where the spreading agent has a limited lifetime at nodes: disease spreading (recovery time), diffusion of rumors (lifetime of information), and passenger routing (maximum acceptable time between transfers). We introduce weighted event graphs as a powerful and fast framework for studying connectivity determined by time-respecting paths where the allowed waiting times between contacts have an upper limit. We study percolation on the weighted event graphs and in the underlying temporal networks, with simulated and real-world networks. We show that this type of temporal-network percolation is analogous to directed percolation, and that it can be characterized by multiple order parameters.

20.
Sci Rep ; 8(1): 3094, 2018 02 15.
Article in English | MEDLINE | ID: mdl-29449569

ABSTRACT

Weighted networks capture the structure of complex systems where interaction strength is meaningful. This information is essential to a large number of processes, such as threshold dynamics, where link weights reflect the amount of influence that neighbours have in determining a node's behaviour. Despite describing numerous cascading phenomena, such as neural firing or social contagion, the modelling of threshold dynamics on weighted networks has been largely overlooked. We fill this gap by studying a dynamical threshold model over synthetic and real weighted networks with numerical and analytical tools. We show that the time of cascade emergence depends non-monotonously on weight heterogeneities, which accelerate or decelerate the dynamics, and lead to non-trivial parameter spaces for various networks and weight distributions. Our methodology applies to arbitrary binary state processes and link properties, and may prove instrumental in understanding the role of edge heterogeneities in various natural and social phenomena.

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