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1.
Antonie Van Leeuwenhoek ; 96(4): 423-39, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19533408

ABSTRACT

Recent studies have indicated that oil reservoirs harbour diverse microbial communities. Culture-dependent and culture-independent methods were used to evaluate the microbial diversity in produced water samples of the Ekofisk oil field, a high temperature, and fractured chalk reservoir in the North Sea. DGGE analyses of 16S rRNA gene fragments were used to assess the microbial diversity of both archaeal and bacterial communities in produced water samples and enrichment cultures from 4 different wells (B-08, X-08, X-18 and X-25). Low diversity communities were found when 16S rDNA libraries of bacterial and archaeal assemblages were generated from total community DNA obtained from produced water samples and enrichment cultures. Sequence analysis of the clones indicated close matches to microbes associated with high-temperature oil reservoirs or other similar environments. Sequences were found to be similar to members of the genera Thermotoga, Caminicella, Thermoanaerobacter, Archaeoglobus, Thermococcus, and Methanobulbus. Enrichment cultures obtained from the produced water samples were dominated by sheathed rods. Sequence analyses of the cultures indicated predominance of the genera Petrotoga, Arcobacter, Archaeoglobus and Thermococcus. The communities of both produced water and enrichment cultures appeared to be dominated by thermophilic fermenters capable of reducing sulphur compounds. These results suggest that the biochemical processes in the Ekofisk chalk reservoir are similar to those observed in high-temperature sandstone reservoirs.


Subject(s)
Archaea/classification , Archaea/isolation & purification , Bacteria/classification , Bacteria/isolation & purification , Biodiversity , Petroleum/microbiology , Archaea/genetics , Archaea/growth & development , Bacteria/genetics , Bacteria/growth & development , Cluster Analysis , DNA, Archaeal/chemistry , DNA, Archaeal/genetics , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Electrophoresis, Polyacrylamide Gel/methods , Genes, rRNA , Molecular Sequence Data , North Sea , Nucleic Acid Denaturation , Phylogeny , RNA, Archaeal/genetics , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Sequence Homology, Nucleic Acid
2.
Appl Microbiol Biotechnol ; 75(1): 195-203, 2007 May.
Article in English | MEDLINE | ID: mdl-17245576

ABSTRACT

Thermophilic sulfate-reducing bacteria (tSRB) can be major contributors to the production of H(2)S (souring) in oil reservoirs. Two tSRB enrichments from a North Sea oil field, NS-tSRB1 and NS-tSRB2, were obtained at 58 degrees C with acetate-propionate-butyrate and with lactate as the electron donor, respectively. Analysis by rDNA sequencing indicated the presence of Thermodesulforhabdus norvegicus in NS-tSRB1 and of Archaeoglobus fulgidus in NS-tSRB2. Nitrate (10 mM) had no effect on H(2)S production by mid-log phase cultures of NS-tSRB1 and NS-tSRB2, whereas nitrite (0.25 mM or higher) inhibited sulfate reduction. NS-tSRB1 did not recover from inhibition, whereas sulfate reduction activity of NS-tSRB2 recovered after 500 h. Nitrite was also effective in souring inhibition and H(2)S removal in upflow bioreactors, whereas nitrate was similarly ineffective. Hence, nitrite may be preferable for souring prevention in some high-temperature oil fields because it reacts directly with sulfide and provides long-lasting inhibition of sulfate reduction.


Subject(s)
Archaeoglobus , Deltaproteobacteria , Fuel Oils , Nitrates/pharmacology , Nitrites/pharmacology , Sulfides/metabolism , Archaeoglobus/classification , Archaeoglobus/genetics , Archaeoglobus/isolation & purification , Archaeoglobus/metabolism , Deltaproteobacteria/classification , Deltaproteobacteria/genetics , Deltaproteobacteria/isolation & purification , Deltaproteobacteria/metabolism , Hot Temperature , Molecular Sequence Data , North Sea , Seawater/microbiology , Sequence Analysis, DNA , Sulfates/metabolism , Sulfur-Reducing Bacteria/classification , Sulfur-Reducing Bacteria/genetics , Sulfur-Reducing Bacteria/isolation & purification , Sulfur-Reducing Bacteria/metabolism
3.
Appl Microbiol Biotechnol ; 72(6): 1308-15, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16568311

ABSTRACT

Samples from an oil storage tank (resident temperature 40 to 60 degrees C), which experienced unwanted periodic odorous gas emissions, contained up to 2,400/ml of thermophilic, lactate-utilizing, sulfate-reducing bacteria. Significant methane production was also evident. Enrichments on acetate gave sheathed filaments characteristic of the acetotrophic methanogen Methanosaeta thermophila of which the presence was confirmed by determining the PCR-amplified 16S rDNA sequence. 16S rDNA analysis of enrichments, grown on lactate- and sulfate-containing media, indicated the presence of bacteria related to Garciella nitratireducens, Clostridium sp. and Acinetobacter sp. These sulfidogenic enrichments typically produced sulfide to a maximum concentration of 5-7 mM in media containing excess lactate and 10 mM sulfate or thiosulfate. Both the production of sulfide and the consumption of acetate by the enrichment cultures were inhibited by low concentrations of nitrite (0.5-1.0 mM). Hence, addition of nitrite may be an effective way to prevent odorous gas emissions from the storage tank.


Subject(s)
Anti-Infective Agents/pharmacology , Bacteria/drug effects , Methane/biosynthesis , Methanosarcinales/drug effects , Methanosarcinales/metabolism , Nitrites/pharmacology , Petroleum/microbiology , Bacteria/classification , Bacteria/isolation & purification , Bacteria/metabolism , DNA, Archaeal/chemistry , DNA, Archaeal/genetics , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Environmental Microbiology , Genes, rRNA , Lactic Acid/metabolism , Methanosarcinales/classification , Methanosarcinales/isolation & purification , Molecular Sequence Data , Oxidation-Reduction , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Sequence Homology, Nucleic Acid , Sulfates/metabolism
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