Dispersion and diversification of Lyssavirus rabies transmitted from haematophagous bats Desmodus rotundus: a phylogeographical study.

Rabies is worldwide zoonosis caused by Lyssavirus rabies (RABV) a RNA negative sense virus with low level of fidelity during replication cycle. Nucleoprotein of RABV is the most conserved between all five proteins of the virus and is the most used gene for phylogenetic and phylogeographic studies. Despite of rabies been very important in Public Health concern, it demands continuous prophylactic care for herbivores with economic interest, such as cattle and horses. The main transmitter of RABV for these animals in Brazil is the hematophagous bats Desmodus rotundus. The aim of this study was to determine the dispersion over time and space of RABV transmitted by D. rotundus. Samples of RABV from the State of São Paulo (SP), Southeast Brazil isolated from the central nervous system (CNS) of cattle, were submitted to RNA extraction, RT-PCR, sequencing and phylogeographic analyzes with BEAST (Bayesian Evolutionary Analysis Sampling Trees) v 2.5 software. Was possible to identify high rate of diversification in starts sublineages of RABV what are correlated with a behavior of D. rotundus, the main transmitter of rabies to cattle. This study also highlights the importance of continuous monitoring of genetic lineages of RABV in Brazil.

Phylogenetic analysis of rabies virus isolated from canids in North and Northeast Brazil.

Cases of canine rabies continue to occur in North and Northeast Brazil, and the number of notifications of rabies cases in wild canids has increased as a result of the expansion of urban areas at the expense of areas with native vegetation. In light of this, we performed molecular characterization of rabies virus isolates from dogs and Cerdocyon thous from various states in North and Northeast Brazil. In all, 102 samples from dogs (n = 56) and Cerdocyon thous (n = 46) collected between 2006 and 2012 were used. The nucleotide sequences obtained for the N gene of rabies virus were analyzed, and phylogenetic analysis revealed the presence of two distinct genetic lineages, one associated with canids and one with bats, and, within the canid cluster, two distinct sublineages circulating among dogs and Cerdocyon thous. In addition, phylogenetic groups associated with geographic region and fourteen cases of interspecific infection were observed among the isolates from canids. Our findings show that analysis of rabies virus lineages isolated from reservoirs such as canids must be constantly evaluated because the mutation rate is high.

Antigenic and genetic stability of rabies virus

Rabies virus (RABV) is a single stranded RNA genome virus that encodes five proteins: nucleoprotein (N), phosphoprotein (P), matrix protein (M), glycoprotein (G) and RNA dependent polymerase (L). However, RABV seem to be remarkably stable antigenic and genomic differences among isolates from different species have been recognized for many years.Analysis of RABV isolates from different natural reservoirs reveals antigenic variants and/or genetic lineages with specific characteristics, suggesting selection and adaptation of viruses to each of the particular species. Such selections and adaptations are so specific that they allow for the identification of the natural reservoir of origin of a determined isolate.This work was conducted to investigate the genomic and antigenic stability of four different genetic lineages of RABV,originated from different host species, following successive passages in mice. Four RABV isolates (IP4005/10, IP964/06, IP3629/11 and IP4871/11) were inoculated intracerebrally into 3-4 weeks-old mice. After each passage, the viruses were examined in their antigenic profile with a panel of monoclonal antibodies to rabies virus antigens. Viral RNA wasextracted from the 1st, 5th and 10th passages and submitted to reverse transcription (RT) followed by polymerase chain reaction (RT-PCR), sequencing and phylogenetic analyses. Antigenic profile of the isolates did not reveal any recognizable alteration throughout. No nucleotide substitutions were noticed in the final sequences in any of genes sequenced fromthe four RABV isolates, with the exception of one nonsynonymous substitution in the putative protein P in position of amino-acid 222 in the isolate of non-hematophagous bat origin. These findings highlight the high antigenic and genetic stability of RABV, as opposed to the alleged high genomic variability of viruses with RNA genomes. On the other hand, itseems that different isolates may present different degrees of genetic stability, ...